RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 ATP1A3P13637 1013 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 MARCKSP29966 332 aaPredicted RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 ADD2P35612 726 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 PIP4K2AP48426 406 aaPredicted RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 HAND2P61296 217 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 GNG11P61952 73 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 POSTNQ15063 836 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 KRT23Q9C075 422 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 FANCLQ9NW38 375 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 GOLGA8AA7E2F4 631 aa16.84■□□□□ 0.29
DDX56-205ENST00000433257 FOXP2O15409 715 aa16.84■□□□□ 0.29
DDX56-205ENST00000433257 EIF3JO75822 258 aaKnown RBP16.84■□□□□ 0.29
DDX56-205ENST00000433257 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
DDX56-205ENST00000433257 ZNF18P17022 549 aa16.84■□□□□ 0.29
DDX56-205ENST00000433257 TXLNAP40222 546 aa16.84■□□□□ 0.29
DDX56-205ENST00000433257 IFIT5Q13325 482 aaKnown RBP16.84■□□□□ 0.29
DDX56-205ENST00000433257 PNOCQ13519 176 aa16.84■□□□□ 0.29
DDX56-205ENST00000433257 SART3Q15020 963 aaKnown RBP16.84■□□□□ 0.29
DDX56-205ENST00000433257 AMIGO3Q86WK7 504 aa16.84■□□□□ 0.29
DDX56-205ENST00000433257 NOSTRINQ8IVI9 506 aa16.84■□□□□ 0.29
DDX56-205ENST00000433257 PYM1Q9BRP8 204 aaKnown RBP16.84■□□□□ 0.29
DDX56-205ENST00000433257 PDGFDQ9GZP0 370 aaPredicted RBP16.84■□□□□ 0.29
DDX56-205ENST00000433257 RAI14Q9P0K7 980 aa16.84■□□□□ 0.29
DDX56-205ENST00000433257 PCDHA5Q9Y5H7 936 aa16.84■□□□□ 0.29
DDX56-205ENST00000433257 TIAM2Q8IVF5 1701 aa16.83■□□□□ 0.29
DDX56-205ENST00000433257 NBPF26B4DH59 902 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 NPHP1O15259 732 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 ZPR1O75312 459 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 CSF1RP07333 972 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 IFNAR1P17181 557 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 PLCD1P51178 756 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 EIF5P55010 431 aaKnown RBP16.83■□□□□ 0.28
DDX56-205ENST00000433257 TCIRG1Q13488 830 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 MORC3Q14149 939 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 FILIP1LQ4L180 1135 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 NBPF10Q6P3W6 841 aaKnown RBP16.83■□□□□ 0.28
DDX56-205ENST00000433257 NFXL1Q6ZNB6 911 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 NBPF15Q8N660 670 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 EXOC4Q96A65 974 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 ACBD3Q9H3P7 528 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 MYO1AQ9UBC5 1043 aa16.83■□□□□ 0.28
DDX56-205ENST00000433257 AKR1B15C9JRZ8 316 aaPredicted RBP16.82■□□□□ 0.28
DDX56-205ENST00000433257 PTPREP23469 700 aa16.82■□□□□ 0.28
DDX56-205ENST00000433257 SARSP49591 514 aaKnown RBP16.82■□□□□ 0.28
DDX56-205ENST00000433257 MDM2Q00987 491 aaPredicted RBP16.82■□□□□ 0.28
DDX56-205ENST00000433257 PODXL2Q9NZ53 605 aa16.82■□□□□ 0.28
DDX56-205ENST00000433257 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
DDX56-205ENST00000433257 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 TULP2O00295 520 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 KIF5CO60282 957 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 ZBTB7AO95365 584 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 XBP1P17861 261 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 ZAP70P43403 619 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 LONRF3Q496Y0 759 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 HSP90AB3PQ58FF7 597 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 PPFIBP1Q86W92 1011 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 TC2NQ8N9U0 490 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 DPF2Q92785 391 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 PUS7LQ9H0K6 701 aaKnown RBP16.81■□□□□ 0.28
DDX56-205ENST00000433257 MAN1B1Q9UKM7 699 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 NFE2L3Q9Y4A8 694 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 SLC12A7Q9Y666 1083 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 MMP1P03956 469 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 GNAT2P19087 354 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 TRIM14Q14142 442 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 SMC1AQ14683 1233 aaKnown RBP16.81■□□□□ 0.28
DDX56-205ENST00000433257 NTRK3Q16288 839 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 SRGAP1Q7Z6B7 1085 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 PDILTQ8N807 584 aa16.81■□□□□ 0.28
DDX56-205ENST00000433257 GPHNQ9NQX3 736 aaPredicted RBP16.81■□□□□ 0.28
DDX56-205ENST00000433257 TTF2Q9UNY4 1162 aaKnown RBP16.81■□□□□ 0.28
DDX56-205ENST00000433257 ITIH6Q6UXX5 1313 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 A0A1B0GTH6 734 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 DEXIO95424 95 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 TBC1D8O95759 1140 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 NR1I3Q14994 352 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 TMEM67Q5HYA8 995 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 CNGA4Q8IV77 575 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 ZBTB38Q8NAP3 1195 aaPredicted RBP16.8■□□□□ 0.28
DDX56-205ENST00000433257 KIFC2Q96AC6 838 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 SPON1Q9HCB6 807 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 ATF5Q9Y2D1 282 aaPredicted RBP16.8■□□□□ 0.28
DDX56-205ENST00000433257 SRPRBQ9Y5M8 271 aaKnown RBP16.8■□□□□ 0.28
DDX56-205ENST00000433257 CHD4Q14839 1912 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 UBR3Q6ZT12 1888 aa16.8■□□□□ 0.28
DDX56-205ENST00000433257 ARAP2Q8WZ64 1704 aa16.79■□□□□ 0.28
DDX56-205ENST00000433257 MCM3P25205 808 aa16.79■□□□□ 0.28
DDX56-205ENST00000433257 OAS2P29728 719 aaKnown RBP16.79■□□□□ 0.28
DDX56-205ENST00000433257 USP5P45974 858 aa16.79■□□□□ 0.28
DDX56-205ENST00000433257 TTLL7Q6ZT98 887 aa16.79■□□□□ 0.28
DDX56-205ENST00000433257 HDXQ7Z353 690 aa16.79■□□□□ 0.28
DDX56-205ENST00000433257 DZIP3Q86Y13 1208 aaKnown RBP16.79■□□□□ 0.28
DDX56-205ENST00000433257 NLGN1Q8N2Q7 840 aa16.79■□□□□ 0.28
DDX56-205ENST00000433257 SPATA20Q8TB22 786 aa16.79■□□□□ 0.28
DDX56-205ENST00000433257 IGDCC4Q8TDY8 1250 aa16.79■□□□□ 0.28
DDX56-205ENST00000433257 ZNF594Q96JF6 807 aaPredicted RBP16.79■□□□□ 0.28
DDX56-205ENST00000433257 LY9Q9HBG7 655 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms