RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 TRIM60Q495X7 471 aa19.66■□□□□ 0.74
NUP50-209ENST00000432340 SLC4A10Q6U841 1118 aa19.66■□□□□ 0.74
NUP50-209ENST00000432340 PPM1EQ8WY54 764 aa19.66■□□□□ 0.74
NUP50-209ENST00000432340 BICC1Q9H694 974 aaKnown RBP19.66■□□□□ 0.74
NUP50-209ENST00000432340 GINM1Q9NU53 330 aa19.66■□□□□ 0.74
NUP50-209ENST00000432340 RBPJLQ9UBG7 517 aa19.66■□□□□ 0.74
NUP50-209ENST00000432340 MUC3AQ02505 3323 aa19.65■□□□□ 0.74
NUP50-209ENST00000432340 DOCK3Q8IZD9 2030 aa19.65■□□□□ 0.74
NUP50-209ENST00000432340 SLC15A5A6NIM6 579 aa19.65■□□□□ 0.74
NUP50-209ENST00000432340 PAGR1Q9BTK6 254 aa19.65■□□□□ 0.74
NUP50-209ENST00000432340 PORCNQ9H237 461 aa19.65■□□□□ 0.74
NUP50-209ENST00000432340 AK9Q5TCS8 1911 aa19.64■□□□□ 0.74
NUP50-209ENST00000432340 HOXC6P09630 235 aa19.64■□□□□ 0.73
NUP50-209ENST00000432340 BTDP43251 543 aa19.64■□□□□ 0.73
NUP50-209ENST00000432340 KAZALD1Q96I82 304 aa19.64■□□□□ 0.73
NUP50-209ENST00000432340 RABGAP1Q9Y3P9 1069 aa19.64■□□□□ 0.73
NUP50-209ENST00000432340 USP17L10C9JJH3 530 aa19.63■□□□□ 0.73
NUP50-209ENST00000432340 ZBTB22O15209 634 aa19.63■□□□□ 0.73
NUP50-209ENST00000432340 VAMP4O75379 141 aa19.63■□□□□ 0.73
NUP50-209ENST00000432340 RAG1P15918 1043 aa19.63■□□□□ 0.73
NUP50-209ENST00000432340 FPGSQ05932 587 aa19.63■□□□□ 0.73
NUP50-209ENST00000432340 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
NUP50-209ENST00000432340 WDR78Q5VTH9 848 aa19.63■□□□□ 0.73
NUP50-209ENST00000432340 DDX4Q9NQI0 724 aaKnown RBP19.63■□□□□ 0.73
NUP50-209ENST00000432340 EYA2O00167 538 aa19.62■□□□□ 0.73
NUP50-209ENST00000432340 CLTBP09497 229 aa19.62■□□□□ 0.73
NUP50-209ENST00000432340 NBPF7P0C2Y1 421 aaPredicted RBP19.62■□□□□ 0.73
NUP50-209ENST00000432340 DOCK1Q14185 1865 aa19.62■□□□□ 0.73
NUP50-209ENST00000432340 TRIM43BA6NCK2 446 aa19.61■□□□□ 0.73
NUP50-209ENST00000432340 Q3C1V9 767 aa19.61■□□□□ 0.73
NUP50-209ENST00000432340 WWC1Q8IX03 1113 aa19.61■□□□□ 0.73
NUP50-209ENST00000432340 TRIM43Q96BQ3 446 aaPredicted RBP19.61■□□□□ 0.73
NUP50-209ENST00000432340 PIEZO1Q92508 2521 aa19.61■□□□□ 0.73
NUP50-209ENST00000432340 NCOR1O75376 2440 aa19.61■□□□□ 0.73
NUP50-209ENST00000432340 MAST2Q6P0Q8 1798 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 MROH7-TTC4A0A0A0MT08 1334 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 MYCNP04198 464 aaPredicted RBP19.6■□□□□ 0.73
NUP50-209ENST00000432340 LDHCP07864 332 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 PTPREP23469 700 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 GSTO1P78417 241 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 TLE2Q04725 743 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 ATP2B3Q16720 1220 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 TMEM31Q5JXX7 168 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 SLC5A4Q9NY91 659 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 PI4KBQ9UBF8 816 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 ABCF2Q9UG63 623 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 FBXO3Q9UK99 471 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 EYSQ5T1H1 3165 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 PRUNE2Q8WUY3 3088 aa19.6■□□□□ 0.73
NUP50-209ENST00000432340 PDS5AQ29RF7 1337 aaKnown RBP19.59■□□□□ 0.73
NUP50-209ENST00000432340 GPR75-ASB3A0A0A6YYF3 556 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 FAM196BA6NMK8 535 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 KIAA0355O15063 1070 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 SEPT4O43236 478 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 SLURP2P0DP57 97 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 CYBAP13498 195 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 POTEEQ6S8J3 1075 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 CCDC129Q6ZRS4 1044 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 ANKRD44Q8N8A2 993 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 TRIM34Q9BYJ4 488 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 DHX36Q9H2U1 1008 aaKnown RBP19.59■□□□□ 0.73
NUP50-209ENST00000432340 CXXC1Q9P0U4 656 aaPredicted RBP19.59■□□□□ 0.73
NUP50-209ENST00000432340 CEP126Q9P2H0 1117 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 DOCK2Q92608 1830 aa19.59■□□□□ 0.73
NUP50-209ENST00000432340 FANCIQ9NVI1 1328 aa19.58■□□□□ 0.73
NUP50-209ENST00000432340 CYP2C19P33261 490 aa19.58■□□□□ 0.72
NUP50-209ENST00000432340 ADCYAP1R1P41586 468 aa19.58■□□□□ 0.72
NUP50-209ENST00000432340 NCBP3Q53F19 620 aaKnown RBP19.58■□□□□ 0.72
NUP50-209ENST00000432340 OLFML2BQ68BL8 750 aa19.58■□□□□ 0.72
NUP50-209ENST00000432340 USP17L2Q6R6M4 530 aa19.58■□□□□ 0.72
NUP50-209ENST00000432340 SH3RF1Q7Z6J0 888 aa19.58■□□□□ 0.72
NUP50-209ENST00000432340 FLRT1Q9NZU1 646 aa19.58■□□□□ 0.72
NUP50-209ENST00000432340 PTPRFP10586 1907 aa19.58■□□□□ 0.72
NUP50-209ENST00000432340 LOC285556D6RIA3 1793 aa19.57■□□□□ 0.72
NUP50-209ENST00000432340 IGFBP4P22692 258 aa19.57■□□□□ 0.72
NUP50-209ENST00000432340 GRB14Q14449 540 aa19.57■□□□□ 0.72
NUP50-209ENST00000432340 RAB30Q15771 203 aa19.57■□□□□ 0.72
NUP50-209ENST00000432340 DPP9Q86TI2 863 aa19.57■□□□□ 0.72
NUP50-209ENST00000432340 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
NUP50-209ENST00000432340 LRFN3Q9BTN0 628 aa19.57■□□□□ 0.72
NUP50-209ENST00000432340 USP17L15C9J2P7 530 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 USP17L13C9JLJ4 530 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 USP17L11C9JVI0 530 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 USP17L18D6R9N7 530 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 USP17L22D6RA61 530 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 USP17L17D6RBQ6 530 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 USP17L19D6RCP7 530 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 USP17L20D6RJB6 530 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 STRNO43815 780 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 PEX10O60683 326 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 RHBDL3P58872 404 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 USP17L24Q0WX57 530 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 ERICH6Q7L0X2 663 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 PRDM12Q9H4Q4 367 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 TMEM39AQ9NV64 488 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 MSRAQ9UJ68 235 aa19.56■□□□□ 0.72
NUP50-209ENST00000432340 NOL10Q9BSC4 688 aaKnown RBP19.55■□□□□ 0.72
NUP50-209ENST00000432340 LTBP2Q14767 1821 aa19.55■□□□□ 0.72
NUP50-209ENST00000432340 CDH23Q9H251 3354 aa19.55■□□□□ 0.72
NUP50-209ENST00000432340 DCDC2CA8MYV0 355 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms