RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 CD53P19397 219 aa7.44□□□□□ -1.22
NIPAL3-205ENST00000432012 RRM1P23921 792 aa7.44□□□□□ -1.22
NIPAL3-205ENST00000432012 RARSP54136 660 aaKnown RBP7.44□□□□□ -1.22
NIPAL3-205ENST00000432012 USP4Q13107 963 aa7.44□□□□□ -1.22
NIPAL3-205ENST00000432012 PPP4R4Q6NUP7 873 aa7.44□□□□□ -1.22
NIPAL3-205ENST00000432012 CITED4Q96RK1 184 aa7.44□□□□□ -1.22
NIPAL3-205ENST00000432012 ADAMTS7Q9UKP4 1686 aa7.44□□□□□ -1.22
NIPAL3-205ENST00000432012 KLF4O43474 513 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 NRDCO43847 1150 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 FOSP01100 380 aaPredicted RBP7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 EMP3P54852 163 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 PTPN12Q05209 780 aaKnown RBP7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 LONRF1Q17RB8 773 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 AS3MTQ9HBK9 375 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 LEMD3Q9Y2U8 911 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 LTBP1Q14766 1721 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 TRIM55Q9BYV6 548 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 PDZRN3Q9UPQ7 1066 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 TTC21BQ7Z4L5 1316 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 BPNT1O95861 308 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 Q3C1V9 767 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 TRAPPC3LQ5T215 181 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 SH3RF1Q7Z6J0 888 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 EDEM1Q92611 657 aa7.43□□□□□ -1.22
NIPAL3-205ENST00000432012 LTN1O94822 1766 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 USP31Q70CQ4 1352 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 GOLGA6L3A6NEY3 463 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 ITGBL1O95965 494 aaPredicted RBP7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 RLBP1P12271 317 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 SQSTM1Q13501 440 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 RAB33AQ14088 237 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 ZKSCAN2Q63HK3 967 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 PDILTQ8N807 584 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 FOXJ1Q92949 421 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 ANAPC16Q96DE5 110 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 FSD2A1L4K1 749 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 PRPF3O43395 683 aaKnown RBP7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 LDHCP07864 332 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 BRDTQ58F21 947 aaPredicted RBP7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 CCDC81Q6ZN84 652 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 RUNDC1Q96C34 613 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 CAPNS2Q96L46 248 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 C8orf48Q96LL4 319 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 GPR101Q96P66 508 aaPredicted RBP7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 RWDD1Q9H446 243 aaPredicted RBP7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 ST7Q9NRC1 585 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 BSDC1Q9NW68 430 aaPredicted RBP7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 ADAMTS1Q9UHI8 967 aa7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 ABT1Q9ULW3 272 aaKnown RBP7.42□□□□□ -1.22
NIPAL3-205ENST00000432012 PRSS47A8MTI9 375 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 PPP1R12BO60237 982 aaPredicted RBP7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 XRCC6P12956 609 aaKnown RBP eCLIP7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 EIF4BP23588 611 aaKnown RBP7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 MCM4P33991 863 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 TOMM20Q15388 145 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 LINC01559Q495D7 138 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 PNMA8AQ86V59 439 aaPredicted RBP7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 CSRNP1Q96S65 589 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 UNC93B1Q9H1C4 597 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 GINM1Q9NU53 330 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 ZNF831Q5JPB2 1677 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 SCGB1D2O95969 90 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 MASP1P48740 699 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 SIM2Q14190 667 aaPredicted RBP7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 NBPF20Q3BBV1 942 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 WDR63Q8IWG1 891 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 UBR7Q8N806 425 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 ZFRQ96KR1 1074 aaKnown RBP7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 GGNBP2Q9H3C7 697 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 TNNQ9UQP3 1299 aa7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 RTCBQ9Y3I0 505 aaKnown RBP7.41□□□□□ -1.22
NIPAL3-205ENST00000432012 DLEC1Q9Y238 1755 aa7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 CCDC88AQ3V6T2 1871 aa7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 HMGB1P1B2RPK0 211 aaPredicted RBP7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 SOX10P56693 466 aa7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 RASSF7Q02833 373 aa7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 AXDND1Q5T1B0 1012 aaPredicted RBP7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 ERMP1Q7Z2K6 904 aa7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 FAM160A2Q8N612 972 aaPredicted RBP7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 CXorf38Q8TB03 319 aa7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 SENP7Q9BQF6 1050 aa7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 SPON2Q9BUD6 331 aa7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 ENAMQ9NRM1 1142 aa7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 SWAP70Q9UH65 585 aa7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 RRP7AQ9Y3A4 280 aaKnown RBP7.4□□□□□ -1.22
NIPAL3-205ENST00000432012 ACTN4O43707 911 aaKnown RBP7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 RC3H1Q5TC82 1133 aaKnown RBP7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 RNF20Q5VTR2 975 aa7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 SLC4A10Q6U841 1118 aa7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 FAM169BQ8N8A8 192 aa7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 SLC17A8Q8NDX2 589 aa7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 LTBP3Q9NS15 1303 aa7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 CHMP5Q9NZZ3 219 aa7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 KLK14Q9P0G3 267 aa7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 CNTN3Q9P232 1028 aa7.4□□□□□ -1.23
NIPAL3-205ENST00000432012 MAP2P11137 1827 aaKnown RBP7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 MAP3K19Q56UN5 1328 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 PCDH11XQ9BZA7 1347 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 PCDH11YQ9BZA8 1340 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms