RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 KIFC2Q96AC6 838 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 STARD7Q9NQZ5 370 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 ARPP21Q9UBL0 812 aaPredicted RBP5.41□□□□□ -1.54
UBE4A-202ENST00000431736 RABGAP1Q9Y3P9 1069 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 TIMM10P62072 90 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 FMR1Q06787 632 aaKnown RBP eCLIP5.41□□□□□ -1.54
UBE4A-202ENST00000431736 LRRC24Q50LG9 513 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 ANKRD45Q5TZF3 282 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 PPP4R3AQ6IN85 833 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 C15orf52Q6ZUT6 534 aaKnown RBP5.41□□□□□ -1.54
UBE4A-202ENST00000431736 CLMNQ96JQ2 1002 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 APBA2Q99767 749 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 BOLA2Q9H3K6 86 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 IL1RAPL2Q9NP60 686 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 R3HCC1Q9Y3T6 440 aaKnown RBP5.41□□□□□ -1.54
UBE4A-202ENST00000431736 ZBED9Q6R2W3 1325 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 BTBD19C9JJ37 291 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 COG2Q14746 738 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 FAM110CQ1W6H9 321 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 CDC42EP5Q6NZY7 148 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 U2AF1L4Q8WU68 220 aaKnown RBP5.4□□□□□ -1.54
UBE4A-202ENST00000431736 RNPC3Q96LT9 517 aaKnown RBP5.4□□□□□ -1.54
UBE4A-202ENST00000431736 PA2G4Q9UQ80 394 aaKnown RBP5.4□□□□□ -1.54
UBE4A-202ENST00000431736 SUPT20HL2P0C7V6 817 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 ODR4Q5SWX8 454 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 UIMC1Q96RL1 719 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 MRIQ9BWK5 157 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 MROH8Q9H579 483 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 RPTORQ8N122 1335 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 STRNO43815 780 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 PHKA1P46020 1223 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 LPAR1Q92633 364 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 PUS3Q9BZE2 481 aaKnown RBP5.4□□□□□ -1.54
UBE4A-202ENST00000431736 HOMER2Q9NSB8 354 aa5.4□□□□□ -1.54
UBE4A-202ENST00000431736 TNRC6CQ9HCJ0 1690 aaKnown RBP5.4□□□□□ -1.55
UBE4A-202ENST00000431736 IRF6O14896 467 aa5.4□□□□□ -1.55
UBE4A-202ENST00000431736 GH2P01242 217 aa5.4□□□□□ -1.55
UBE4A-202ENST00000431736 CSF1RP07333 972 aa5.4□□□□□ -1.55
UBE4A-202ENST00000431736 PRKAR2AP13861 404 aaKnown RBP5.4□□□□□ -1.55
UBE4A-202ENST00000431736 PPIGQ13427 754 aaKnown RBP eCLIP5.4□□□□□ -1.553e-6■■□□□ 11.5
UBE4A-202ENST00000431736 IMMTQ16891 758 aaKnown RBP5.4□□□□□ -1.55
UBE4A-202ENST00000431736 FAM160B2Q86V87 743 aa5.4□□□□□ -1.55
UBE4A-202ENST00000431736 MYL3P08590 195 aa5.4□□□□□ -1.55
UBE4A-202ENST00000431736 ANKLE1Q8NAG6 615 aa5.4□□□□□ -1.55
UBE4A-202ENST00000431736 LRFN2Q9ULH4 789 aa5.4□□□□□ -1.55
UBE4A-202ENST00000431736 USP2O75604 605 aaPredicted RBP5.39□□□□□ -1.55
UBE4A-202ENST00000431736 ALAS1P13196 640 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 XBP1P17861 261 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 INPP5BP32019 993 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 SSTR3P32745 418 aaPredicted RBP5.39□□□□□ -1.55
UBE4A-202ENST00000431736 RAB30Q15771 203 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 NOM1Q5C9Z4 860 aaKnown RBP5.39□□□□□ -1.55
UBE4A-202ENST00000431736 KCNQ5Q9NR82 932 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 PGAP2Q9UHJ9 254 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 PEAK1Q9H792 1746 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 SHTN1A0MZ66 631 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 IGKV5-2P06315 115 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 C6orf222P0C671 652 aaPredicted RBP5.39□□□□□ -1.55
UBE4A-202ENST00000431736 RARSP54136 660 aaKnown RBP5.39□□□□□ -1.55
UBE4A-202ENST00000431736 TNNI3KQ59H18 835 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 MCF2L2Q86YR7 1114 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 FPGT-TNNI3KV9GXZ4 949 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 CCDC69A6NI79 296 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 SLC15A5A6NIM6 579 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 MBD4O95243 580 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 HIRAP54198 1017 aaPredicted RBP5.39□□□□□ -1.55
UBE4A-202ENST00000431736 MECOMQ03112 1051 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 GNPTABQ3T906 1256 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 FBXO33Q7Z6M2 555 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 RPAP3Q9H6T3 665 aaPredicted RBP5.39□□□□□ -1.55
UBE4A-202ENST00000431736 C1orf115Q9H7X2 142 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 PAG1Q9NWQ8 432 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 SLC45A1Q9Y2W3 748 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 NBPF7P0C2Y1 421 aaPredicted RBP5.39□□□□□ -1.55
UBE4A-202ENST00000431736 CYP2C8P10632 490 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 KIF5BP33176 963 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 BFSP2Q13515 415 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 PDIA6Q15084 440 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 CTCFLQ8NI51 663 aaPredicted RBP5.39□□□□□ -1.55
UBE4A-202ENST00000431736 SLC28A3Q9HAS3 691 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 POLR3EQ9NVU0 708 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 EXOC6BQ9Y2D4 811 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 CASZ1Q86V15 1759 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 GNAT1P11488 350 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 SLFN5Q08AF3 891 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 KLHDC4Q8TBB5 520 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 BRMS1Q9HCU9 246 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 ATP8A2Q9NTI2 1148 aa5.39□□□□□ -1.55
UBE4A-202ENST00000431736 SBF2Q86WG5 1849 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 STAT3P40763 770 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 PRKCZQ05513 592 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 NCBP1Q09161 790 aaKnown RBP5.38□□□□□ -1.55
UBE4A-202ENST00000431736 MFSD6Q6ZSS7 791 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 ESR2Q92731 530 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 SLF1Q9BQI6 1058 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 GPR108Q9NPR9 543 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 COPRSQ9NQ92 184 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 CABYRO75952 493 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 PRDX5P30044 214 aa5.38□□□□□ -1.55
UBE4A-202ENST00000431736 BACE1P56817 501 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms