RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 USP5P45974 858 aa12.35□□□□□ -0.43
HMGN1P38-201ENST00000431116 MTMR2Q13614 643 aa12.35□□□□□ -0.43
HMGN1P38-201ENST00000431116 CERS3Q8IU89 383 aa12.35□□□□□ -0.43
HMGN1P38-201ENST00000431116 FOXP4Q8IVH2 680 aaPredicted RBP12.35□□□□□ -0.43
HMGN1P38-201ENST00000431116 SIRT2Q8IXJ6 389 aa12.35□□□□□ -0.43
HMGN1P38-201ENST00000431116 ANKRD13CQ8N6S4 541 aa12.35□□□□□ -0.43
HMGN1P38-201ENST00000431116 KIF1BPQ96EK5 621 aa12.35□□□□□ -0.43
HMGN1P38-201ENST00000431116 CHMP4BQ9H444 224 aaKnown RBP12.35□□□□□ -0.43
HMGN1P38-201ENST00000431116 TNPO2O14787 897 aaKnown RBP12.34□□□□□ -0.43
HMGN1P38-201ENST00000431116 GRK4P32298 578 aa12.34□□□□□ -0.43
HMGN1P38-201ENST00000431116 PABPC4Q13310 644 aaKnown RBP eCLIP12.34□□□□□ -0.43
HMGN1P38-201ENST00000431116 TTF1Q15361 905 aaPredicted RBP12.34□□□□□ -0.43
HMGN1P38-201ENST00000431116 SHROOM1Q2M3G4 852 aaPredicted RBP12.34□□□□□ -0.43
HMGN1P38-201ENST00000431116 DNAJC2Q99543 621 aaKnown RBP12.34□□□□□ -0.43
HMGN1P38-201ENST00000431116 ZBTB21Q9ULJ3 1066 aa12.34□□□□□ -0.43
HMGN1P38-201ENST00000431116 GOLIM4O00461 696 aa12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 PDE6AP16499 860 aa12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 JAG1P78504 1218 aa12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 MTFR1Q15390 333 aa12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 FAM110CQ1W6H9 321 aa12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 SH3D19Q5HYK7 790 aa12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 C20orf194Q5TEA3 1177 aa12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 TMED8Q6PL24 325 aaPredicted RBP12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 METTL16Q86W50 562 aaKnown RBP12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 WDR18Q9BV38 432 aa12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 BIN2Q9UBW5 565 aaPredicted RBP12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 GABRQQ9UN88 632 aa12.33□□□□□ -0.44
HMGN1P38-201ENST00000431116 CEP290O15078 2479 aa12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 RAB11FIP3O75154 756 aa12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 GCLCP48506 637 aaPredicted RBP12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 FLT3LGP49771 235 aa12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 BACE1P56817 501 aa12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 SLC9C2Q5TAH2 1124 aa12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 SLAIN1Q8ND83 568 aa12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 RIOK1Q9BRS2 568 aaKnown RBP12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 ASCC2Q9H1I8 757 aaPredicted RBP12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 EHD4Q9H223 541 aa12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 GINM1Q9NU53 330 aa12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 TAOK2Q9UL54 1235 aa12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 BAZ2AQ9UIF9 1905 aaKnown RBP12.32□□□□□ -0.44
HMGN1P38-201ENST00000431116 CENPFP49454 3210 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 SLC34A2O95436 690 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 GH2P01242 217 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 CCL5P13501 91 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 ELNP15502 786 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 UBXN2AP68543 259 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 PDE3AQ14432 1141 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 TTC6Q86TZ1 520 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 COA7Q96BR5 231 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 SERPINB13Q9UIV8 391 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 ZNF532Q9HCE3 1301 aa12.31□□□□□ -0.44
HMGN1P38-201ENST00000431116 PLXNB2O15031 1838 aa12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 C19orf81C9J6K1 198 aa12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 USP17L10C9JJH3 530 aa12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 ADCY3O60266 1144 aa12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 TATDN1Q6P1N9 297 aa12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 SHISA4Q96DD7 197 aa12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 EDC3Q96F86 508 aaKnown RBP12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 FEZ1Q99689 392 aa12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 RNF208Q9H0X6 261 aa12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 PAG1Q9NWQ8 432 aa12.3□□□□□ -0.44
HMGN1P38-201ENST00000431116 TCRBV5S4A2TA0A5A2 114 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 INHAP05111 366 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 POLR3DP05423 398 aaPredicted RBP12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 IRF5Q13568 498 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 RAB3GAP1Q15042 981 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 LCORLQ8N3X6 602 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 PXYLP1Q8TE99 480 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 LRRCC1Q9C099 1032 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 UNC93B1Q9H1C4 597 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 BOLA2Q9H3K6 86 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 MCM9Q9NXL9 1143 aa12.29□□□□□ -0.44
HMGN1P38-201ENST00000431116 GJB1P08034 283 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 ATP5JP18859 108 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 HOXA7P31268 230 aaPredicted RBP12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 SHMT1P34896 483 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 PLCD1P51178 756 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 HERVK_113P62684 666 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 ZYXQ15942 572 aaKnown RBP12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 ABCB5Q2M3G0 1257 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 CERKLQ49MI3 558 aaPredicted RBP12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 USP17L2Q6R6M4 530 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 SDR42E1Q8WUS8 393 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 P2RX7Q99572 595 aaKnown RBP12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 ARMT1Q9H993 441 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 EMILIN3Q9NT22 766 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 MORF4L1Q9UBU8 362 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 BRCA2P51587 3418 aa12.28□□□□□ -0.44
HMGN1P38-201ENST00000431116 SMARCA5O60264 1052 aaPredicted RBP12.27□□□□□ -0.45
HMGN1P38-201ENST00000431116 PEX10O60683 326 aa12.27□□□□□ -0.45
HMGN1P38-201ENST00000431116 MBD4O95243 580 aa12.27□□□□□ -0.45
HMGN1P38-201ENST00000431116 ADD2P35612 726 aa12.27□□□□□ -0.45
HMGN1P38-201ENST00000431116 GJA8P48165 433 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms