RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 NRXN2Q9P2S2 1712 aa16.12■□□□□ 0.17
HOXC4-202ENST00000430889 FOCADQ5VW36 1801 aa16.12■□□□□ 0.17
HOXC4-202ENST00000430889 A0A087WWV3 80 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 CYP2D6P10635 497 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 HSPA1LP34931 641 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 SLC27A3Q5K4L6 730 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 IFIT1BQ5T764 474 aaKnown RBP16.11■□□□□ 0.17
HOXC4-202ENST00000430889 CMTR1Q8N1G2 835 aaKnown RBP16.11■□□□□ 0.17
HOXC4-202ENST00000430889 WDR66Q8TBY9 1149 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 NUP133Q8WUM0 1156 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 ERCC4Q92889 916 aaPredicted RBP16.11■□□□□ 0.17
HOXC4-202ENST00000430889 NAP1L5Q96NT1 182 aaPredicted RBP16.11■□□□□ 0.17
HOXC4-202ENST00000430889 RBM28Q9NW13 759 aaKnown RBP16.11■□□□□ 0.17
HOXC4-202ENST00000430889 PRDM1O75626 825 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 CALM1P0DP23 149 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 CALM2P0DP24 149 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 CALM3P0DP25 149 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 NT5C2P49902 561 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 PPP4CP60510 307 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
HOXC4-202ENST00000430889 TMTC3Q6ZXV5 915 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 IQCA1Q86XH1 822 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 SDF4Q9BRK5 362 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 TUBE1Q9UJT0 475 aa16.11■□□□□ 0.17
HOXC4-202ENST00000430889 CNTNAP5Q8WYK1 1306 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 GOLGA6L6A8MZA4 724 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 PLEKHA8P1O95397 391 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 GPSM2P81274 684 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 GNL2Q13823 731 aaKnown RBP16.1■□□□□ 0.17
HOXC4-202ENST00000430889 SAFBQ15424 915 aaKnown RBP eCLIP16.1■□□□□ 0.17
HOXC4-202ENST00000430889 NPY5RQ15761 445 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 GRIK5Q16478 980 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 RILPL1Q5EBL4 403 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 CATIPQ7Z7H3 387 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 ELOA2Q8IYF1 753 aaPredicted RBP16.1■□□□□ 0.17
HOXC4-202ENST00000430889 CEP57L1Q8IYX8 460 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 KIAA1524Q8TCG1 905 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 OXER1Q8TDS5 423 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 MRFAP1L1Q96HT8 127 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 PHF20Q9BVI0 1012 aa16.1■□□□□ 0.17
HOXC4-202ENST00000430889 KLRG2A4D1S0 409 aaPredicted RBP16.09■□□□□ 0.17
HOXC4-202ENST00000430889 SLC3A2P08195 630 aaKnown RBP16.09■□□□□ 0.17
HOXC4-202ENST00000430889 PTPREP23469 700 aa16.09■□□□□ 0.17
HOXC4-202ENST00000430889 HOXA10P31260 410 aaPredicted RBP16.09■□□□□ 0.17
HOXC4-202ENST00000430889 SYKP43405 635 aa16.09■□□□□ 0.17
HOXC4-202ENST00000430889 NLRP12P59046 1061 aa16.09■□□□□ 0.17
HOXC4-202ENST00000430889 NR5A1Q13285 461 aa16.09■□□□□ 0.17
HOXC4-202ENST00000430889 DPCR1Q3MIW9 517 aa16.09■□□□□ 0.17
HOXC4-202ENST00000430889 RCSD1Q6JBY9 416 aa16.09■□□□□ 0.17
HOXC4-202ENST00000430889 DZIP1Q86YF9 867 aaKnown RBP16.09■□□□□ 0.17
HOXC4-202ENST00000430889 SPC24Q8NBT2 197 aa16.09■□□□□ 0.17
HOXC4-202ENST00000430889 CLIC6Q96NY7 704 aa16.09■□□□□ 0.17
HOXC4-202ENST00000430889 TRIM5Q9C035 493 aa16.09■□□□□ 0.17
HOXC4-202ENST00000430889 ANKIB1Q9P2G1 1089 aa16.09■□□□□ 0.17
HOXC4-202ENST00000430889 FBXO2Q9UK22 296 aaPredicted RBP16.09■□□□□ 0.17
HOXC4-202ENST00000430889 SERPINB2P05120 415 aa16.08■□□□□ 0.17
HOXC4-202ENST00000430889 LDHBP07195 334 aaKnown RBP16.08■□□□□ 0.17
HOXC4-202ENST00000430889 C12orf60Q5U649 245 aa16.08■□□□□ 0.17
HOXC4-202ENST00000430889 ZNF804AQ7Z570 1209 aa16.08■□□□□ 0.17
HOXC4-202ENST00000430889 CCDC82Q8N4S0 544 aa16.08■□□□□ 0.17
HOXC4-202ENST00000430889 KRI1Q8N9T8 703 aaKnown RBP16.08■□□□□ 0.17
HOXC4-202ENST00000430889 ANKS1AQ92625 1134 aa16.08■□□□□ 0.17
HOXC4-202ENST00000430889 TNFRSF25Q93038 417 aa16.08■□□□□ 0.17
HOXC4-202ENST00000430889 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.17
HOXC4-202ENST00000430889 JAG2Q9Y219 1238 aa16.08■□□□□ 0.17
HOXC4-202ENST00000430889 IL1R1P14778 569 aa16.08■□□□□ 0.16
HOXC4-202ENST00000430889 PTGS1P23219 599 aa16.08■□□□□ 0.16
HOXC4-202ENST00000430889 DDR1Q08345 913 aa16.08■□□□□ 0.16
HOXC4-202ENST00000430889 NOLC1Q14978 699 aaKnown RBP eCLIP16.08■□□□□ 0.16
HOXC4-202ENST00000430889 PODXL2Q9NZ53 605 aa16.08■□□□□ 0.16
HOXC4-202ENST00000430889 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.08■□□□□ 0.16
HOXC4-202ENST00000430889 QSER1Q2KHR3 1735 aa16.07■□□□□ 0.16
HOXC4-202ENST00000430889 GOLGA6L19H0YKK7 550 aa16.07■□□□□ 0.16
HOXC4-202ENST00000430889 POLRMTO00411 1230 aaKnown RBP16.07■□□□□ 0.16
HOXC4-202ENST00000430889 NPHP1O15259 732 aa16.07■□□□□ 0.16
HOXC4-202ENST00000430889 NMT2O60551 498 aa16.07■□□□□ 0.16
HOXC4-202ENST00000430889 USP17L8P0C7I0 530 aa16.07■□□□□ 0.16
HOXC4-202ENST00000430889 ATP2B4P23634 1241 aa16.07■□□□□ 0.16
HOXC4-202ENST00000430889 SRBD1Q8N5C6 995 aaKnown RBP16.07■□□□□ 0.16
HOXC4-202ENST00000430889 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
HOXC4-202ENST00000430889 ZNF579Q8NAF0 562 aaKnown RBP16.07■□□□□ 0.16
HOXC4-202ENST00000430889 SH3RF3Q8TEJ3 882 aaPredicted RBP16.07■□□□□ 0.16
HOXC4-202ENST00000430889 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
HOXC4-202ENST00000430889 NAT10Q9H0A0 1025 aaKnown RBP16.07■□□□□ 0.16
HOXC4-202ENST00000430889 PCDHB6Q9Y5E3 794 aa16.07■□□□□ 0.16
HOXC4-202ENST00000430889 MYH1P12882 1939 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 TPM2P07951 284 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 GSTO1P78417 241 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 ST5P78524 1137 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 PDE4BQ07343 736 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 NCAPHQ15003 741 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 FAM47AQ5JRC9 791 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 CCDC186Q7Z3E2 898 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 METTL16Q86W50 562 aaKnown RBP16.06■□□□□ 0.16
HOXC4-202ENST00000430889 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
HOXC4-202ENST00000430889 GPR101Q96P66 508 aaPredicted RBP16.06■□□□□ 0.16
HOXC4-202ENST00000430889 CD209Q9NNX6 404 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 VPS54Q9P1Q0 977 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 NRBP1Q9UHY1 535 aa16.06■□□□□ 0.16
HOXC4-202ENST00000430889 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms