RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ZBTB21Q9ULJ3 1066 aa15.18■□□□□ 0.02
SMPD4-204ENST00000430682 SHMT1P34896 483 aa15.17■□□□□ 0.02
SMPD4-204ENST00000430682 PSMC4P43686 418 aa15.17■□□□□ 0.02
SMPD4-204ENST00000430682 SH3D19Q5HYK7 790 aa15.17■□□□□ 0.02
SMPD4-204ENST00000430682 TATDN1Q6P1N9 297 aa15.17■□□□□ 0.02
SMPD4-204ENST00000430682 TMED8Q6PL24 325 aaPredicted RBP15.17■□□□□ 0.02
SMPD4-204ENST00000430682 ARMC5Q96C12 935 aa15.17■□□□□ 0.02
SMPD4-204ENST00000430682 PARK7Q99497 189 aaKnown RBP15.17■□□□□ 0.02
SMPD4-204ENST00000430682 WDR18Q9BV38 432 aa15.17■□□□□ 0.02
SMPD4-204ENST00000430682 AGTPBP1Q9UPW5 1226 aa15.17■□□□□ 0.02
SMPD4-204ENST00000430682 PEX10O60683 326 aa15.16■□□□□ 0.02
SMPD4-204ENST00000430682 MBD4O95243 580 aa15.16■□□□□ 0.02
SMPD4-204ENST00000430682 HLA-DOAP06340 250 aa15.16■□□□□ 0.02
SMPD4-204ENST00000430682 ASNSP08243 561 aa15.16■□□□□ 0.02
SMPD4-204ENST00000430682 OSBPP22059 807 aa15.16■□□□□ 0.02
SMPD4-204ENST00000430682 MTMR2Q13614 643 aa15.16■□□□□ 0.02
SMPD4-204ENST00000430682 EHD4Q9H223 541 aa15.16■□□□□ 0.02
SMPD4-204ENST00000430682 DCP1AQ9NPI6 582 aaPredicted RBP15.16■□□□□ 0.02
SMPD4-204ENST00000430682 ECHDC1Q9NTX5 307 aa15.16■□□□□ 0.02
SMPD4-204ENST00000430682 SLC45A1Q9Y2W3 748 aa15.16■□□□□ 0.02
SMPD4-204ENST00000430682 CYP2D7A0A087X1C5 515 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 GH2P01242 217 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 GUCY1A2P33402 732 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 GABPAQ06546 454 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 POTEEQ6S8J3 1075 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 CERS3Q8IU89 383 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 PROCA1Q8NCQ7 364 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-204ENST00000430682 SH3TC2Q8TF17 1288 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 ZNF333Q96JL9 665 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 CRNKL1Q9BZJ0 848 aaKnown RBP15.15■□□□□ 0.02
SMPD4-204ENST00000430682 PUS7LQ9H0K6 701 aaKnown RBP15.15■□□□□ 0.02
SMPD4-204ENST00000430682 SERPINB13Q9UIV8 391 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 GABRQQ9UN88 632 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 RLFQ13129 1914 aa15.15■□□□□ 0.02
SMPD4-204ENST00000430682 BACE1P56817 501 aa15.14■□□□□ 0.01
SMPD4-204ENST00000430682 KIF22Q14807 665 aa15.14■□□□□ 0.01
SMPD4-204ENST00000430682 SLC44A5Q8NCS7 719 aa15.14■□□□□ 0.01
SMPD4-204ENST00000430682 DYNLL2Q96FJ2 89 aa15.14■□□□□ 0.01
SMPD4-204ENST00000430682 ASCC2Q9H1I8 757 aaPredicted RBP15.14■□□□□ 0.01
SMPD4-204ENST00000430682 EMILIN3Q9NT22 766 aa15.14■□□□□ 0.01
SMPD4-204ENST00000430682 MCM9Q9NXL9 1143 aa15.14■□□□□ 0.01
SMPD4-204ENST00000430682 SRRDQ9UH36 339 aa15.14■□□□□ 0.01
SMPD4-204ENST00000430682 FMNL1O95466 1100 aaPredicted RBP15.13■□□□□ 0.01
SMPD4-204ENST00000430682 MYCP01106 439 aaPredicted RBP15.13■□□□□ 0.01
SMPD4-204ENST00000430682 UBE3CQ15386 1083 aa15.13■□□□□ 0.01
SMPD4-204ENST00000430682 TTC6Q86TZ1 520 aa15.13■□□□□ 0.01
SMPD4-204ENST00000430682 ANKRD13CQ8N6S4 541 aa15.13■□□□□ 0.01
SMPD4-204ENST00000430682 PI4K2BQ8TCG2 481 aa15.13■□□□□ 0.01
SMPD4-204ENST00000430682 ACER1Q8TDN7 264 aa15.13■□□□□ 0.01
SMPD4-204ENST00000430682 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
SMPD4-204ENST00000430682 TBC1D2Q9BYX2 928 aa15.13■□□□□ 0.01
SMPD4-204ENST00000430682 AS3MTQ9HBK9 375 aa15.13■□□□□ 0.01
SMPD4-204ENST00000430682 SALL3Q9BXA9 1300 aa15.13■□□□□ 0.01
SMPD4-204ENST00000430682 PARP14Q460N5 1801 aa15.13■□□□□ 0.01
SMPD4-204ENST00000430682 CEP290O15078 2479 aa15.12■□□□□ 0.01
SMPD4-204ENST00000430682 USP17L10C9JJH3 530 aa15.12■□□□□ 0.01
SMPD4-204ENST00000430682 POLR3DP05423 398 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-204ENST00000430682 PRKCZQ05513 592 aa15.12■□□□□ 0.01
SMPD4-204ENST00000430682 CERKLQ49MI3 558 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-204ENST00000430682 SLC9C1Q4G0N8 1177 aa15.12■□□□□ 0.01
SMPD4-204ENST00000430682 P2RX7Q99572 595 aaKnown RBP15.12■□□□□ 0.01
SMPD4-204ENST00000430682 MYPNQ86TC9 1320 aa15.12■□□□□ 0.01
SMPD4-204ENST00000430682 GNRH1P01148 92 aa15.11■□□□□ 0.01
SMPD4-204ENST00000430682 EN2P19622 333 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-204ENST00000430682 SEPT2Q15019 361 aa15.11■□□□□ 0.01
SMPD4-204ENST00000430682 ARHGEF6Q15052 776 aa15.11■□□□□ 0.01
SMPD4-204ENST00000430682 MTFR1Q15390 333 aa15.11■□□□□ 0.01
SMPD4-204ENST00000430682 ABCB5Q2M3G0 1257 aa15.11■□□□□ 0.01
SMPD4-204ENST00000430682 KBTBD3Q8NAB2 608 aa15.11■□□□□ 0.01
SMPD4-204ENST00000430682 SMCR8Q8TEV9 937 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-204ENST00000430682 OSBP2Q969R2 916 aa15.11■□□□□ 0.01
SMPD4-204ENST00000430682 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.11■□□□□ 0.011e-6■■■■□ 21.2
SMPD4-204ENST00000430682 GINM1Q9NU53 330 aa15.11■□□□□ 0.01
SMPD4-204ENST00000430682 GREB1LQ9C091 1923 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-204ENST00000430682 A0A1W2PRG0 241 aa15.1■□□□□ 0.01
SMPD4-204ENST00000430682 HOXA7P31268 230 aaPredicted RBP15.1■□□□□ 0.01
SMPD4-204ENST00000430682 RAB3GAP1Q15042 981 aa15.1■□□□□ 0.01
SMPD4-204ENST00000430682 ZYXQ15942 572 aaKnown RBP15.1■□□□□ 0.01
SMPD4-204ENST00000430682 CLEC10AQ8IUN9 316 aa15.1■□□□□ 0.01
SMPD4-204ENST00000430682 STRBPQ96SI9 672 aaKnown RBP15.1■□□□□ 0.01
SMPD4-204ENST00000430682 TXNRD2Q9NNW7 524 aa15.1■□□□□ 0.01
SMPD4-204ENST00000430682 SLC4A4Q9Y6R1 1079 aa15.1■□□□□ 0.01
SMPD4-204ENST00000430682 C19orf81C9J6K1 198 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 USP17L12C9JPN9 530 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 USP17L21D6R901 530 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 PRMT2P55345 433 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 FCGRTP55899 365 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 FAM110CQ1W6H9 321 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 KIAA1755Q5JYT7 1200 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 C12orf60Q5U649 245 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 SIAH1Q8IUQ4 282 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 SEC62Q99442 399 aaKnown RBP15.09■□□□□ 0.01
SMPD4-204ENST00000430682 ATP8A2Q9NTI2 1148 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 RBPJLQ9UBG7 517 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 PNMA3Q9UL41 463 aa15.09■□□□□ 0.01
SMPD4-204ENST00000430682 COL11A1P12107 1806 aaPredicted RBP15.08■□□□□ 0.01
SMPD4-204ENST00000430682 GSG1L2A8MUP6 293 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 M0R2C6 588 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 RNF113AO15541 343 aaKnown RBP15.08■□□□□ 0
SMPD4-204ENST00000430682 AKR1B1P15121 316 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms