RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ATP1A1P05023 1023 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 PBX1P40424 430 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 SARSP49591 514 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 PDIA6Q15084 440 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 SENP2Q9HC62 589 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 DACH1Q9UI36 760 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
SEMA4D-209ENST00000429836 ANKARQ7Z5J8 1434 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 PTPRUQ92729 1446 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 PIK3C2AO00443 1686 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 MRPS25P82663 173 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 TRDNQ13061 729 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 MAP9Q49MG5 647 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 XAGE3Q8WTP9 111 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 CD248Q9HCU0 757 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 CCDC196A0A1B0GTZ2 297 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 GOLGA6BA6NDN3 693 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 IMMTQ16891 758 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 WASHC4Q2M389 1173 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 CNPY4Q8N129 248 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 CHP1Q99653 195 aa12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEMA4D-209ENST00000429836 SYNRGQ9UMZ2 1314 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 ATP5J2-PTCD1G3V325 749 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 H0YHG0 523 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 EIF3HO15372 352 aaKnown RBP eCLIP12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 RNMTO43148 476 aaKnown RBP12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 FGAP02671 866 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 SCP2P22307 547 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 AFMP43652 599 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 COPS6Q7L5N1 327 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 TRAPPC11Q7Z392 1133 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 RALYLQ86SE5 291 aaKnown RBP12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 MICU3Q86XE3 530 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 ABTB2Q8N961 1025 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 RRP36Q96EU6 259 aaKnown RBP12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 MYL10Q9BUA6 226 aa12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.52□□□□□ -0.4
SEMA4D-209ENST00000429836 ZNF185O15231 689 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 LTKP29376 864 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 USP8P40818 1118 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 PPFIA1Q13136 1202 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 FKBP15Q5T1M5 1219 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 NT5DC1Q5TFE4 455 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 GBP6Q6ZN66 633 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 CNGA4Q8IV77 575 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 NUP88Q99567 741 aaPredicted RBP12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 ABHD10Q9NUJ1 306 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 REXO2Q9Y3B8 237 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 SLIT1O75093 1534 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 ZMYM6O95789 1325 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 METAP2P50579 478 aaKnown RBP eCLIP12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 FKBP4Q02790 459 aaKnown RBP eCLIP12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 POTEDQ86YR6 584 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 TMTC1Q8IUR5 882 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 DHX37Q8IY37 1157 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 FBXL16Q8N461 479 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 PRPF38AQ8NAV1 312 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 VPS16Q9H269 839 aa12.52□□□□□ -0.41
SEMA4D-209ENST00000429836 IFIT1P09914 478 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 BRD2P25440 801 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 ATP2B2Q01814 1243 aa12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 PDCLQ13371 301 aa12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 AKAP4Q5JQC9 854 aa12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 SPATA1Q5VX52 437 aa12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 BTBD18B2RXH4 712 aa12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 TOB1P50616 345 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 C2orf54Q08AI8 447 aa12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 CCNI2Q6ZMN8 369 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 SND1Q7KZF4 910 aaKnown RBP eCLIP12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 NCOA7Q8NI08 942 aa12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 CABS1Q96KC9 395 aa12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 FBXO2Q9UK22 296 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 SAR1BQ9Y6B6 198 aa12.51□□□□□ -0.41
SEMA4D-209ENST00000429836 NWD2Q9ULI1 1742 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 PDE2AO00408 941 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 ACTN4O43707 911 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 ERCC5P28715 1186 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 FNTAP49354 379 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 TRIM29Q14134 588 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 EZH2Q15910 746 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 FILIP1LQ4L180 1135 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 LMBR1LQ6UX01 489 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 CYP26C1Q6V0L0 522 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 CAGE1Q8TC20 777 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 MYO1AQ9UBC5 1043 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 KCNJ14Q9UNX9 436 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 NDUFAB1O14561 156 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 RANBP6O60518 1105 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 KRT9P35527 623 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 TDO2P48775 406 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 SETQ01105 290 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 ANKRD18AQ8IVF6 992 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 ARL8AQ96BM9 186 aa12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 METTL22Q9BUU2 404 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-209ENST00000429836 RGPD8O14715 1765 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms