RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 LONRF2Q1L5Z9 754 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 FAM186BQ8IYM0 893 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 LRRC27Q9C0I9 530 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 SBNO2Q9Y2G9 1366 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 PTPRTO14522 1441 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 BCAS4Q8TDM0 211 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 LEO1Q8WVC0 666 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 IWS1Q96ST2 819 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 L2HGDHQ9H9P8 463 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 CDC23Q9UJX2 597 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 MTMR7Q9Y216 660 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 RIMBP3CA6NJZ7 1639 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 RIMBP3BA6NNM3 1639 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 RIMBP3Q9UFD9 1639 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 ABCA8O94911 1581 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 BICD1Q96G01 975 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 C10orf88Q9H8K7 445 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 CEP126Q9P2H0 1117 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 CHMLP26374 656 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 CASP14P31944 242 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 SRGAP1Q7Z6B7 1085 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 RHPN1Q8TCX5 695 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 EXOC1Q9NV70 894 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 NKIRAS1Q9NYS0 192 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 SCHIP1Q9P0W5 487 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 AREL1O15033 823 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 NNTQ13423 1086 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 FYB2Q5VWT5 728 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 INTS8Q75QN2 995 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 LRRC8AQ8IWT6 810 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 TANGO6Q9C0B7 1094 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 RBM8AQ9Y5S9 174 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 CHD4Q14839 1912 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 SUN1O94901 812 aa8.37□□□□□ -1.07
SYNPO2-202ENST00000429713 CCDC169A6NNP5 214 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 CYP26C1Q6V0L0 522 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 AOPEPQ8N6M6 819 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 AIDAQ96BJ3 306 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 TRIM55Q9BYV6 548 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 ADGRL3Q9HAR2 1447 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 FGFR1OP2Q9NVK5 253 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 RNF17Q9BXT8 1623 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 RTL1A6NKG5 1358 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 ATP2A1O14983 1001 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 GFAPP14136 432 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 SYKP43405 635 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 LAMB3Q13751 1172 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 CCDC13Q8IYE1 715 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 NUP58Q9BVL2 599 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 HAUS4Q9H6D7 363 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 CTNNAL1Q9UBT7 734 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 DENND4BO75064 1496 aaPredicted RBP8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 PI4KAP2A4QPH2 592 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 CUL1Q13616 776 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 PI4KAP1Q8N8J0 262 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 TRAPPC8Q9Y2L5 1435 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 IFIT1P09914 478 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 SSRP1Q08945 709 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 NR1H3Q13133 447 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 CCDC62Q6P9F0 684 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 TRMT2AQ8IZ69 625 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 TSPYL6Q8N831 410 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 CCDC197Q8NCU1 140 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 CCDC26Q8TAB7 109 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 DIABLOQ9NR28 239 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 FRMD4BQ9Y2L6 1034 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 GRAMD4Q6IC98 578 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 FAM129AQ9BZQ8 928 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 RIPOR2Q9Y4F9 1068 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 A0A1W2PQ27 194 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 A0A1W2PQ64 194 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 A0A1W2PQD8 194 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 ABCD1P33897 745 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 Q6ZUG5 572 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 ST13P4Q8IZP2 240 aaPredicted RBP8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 NEK11Q8NG66 645 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 ALDH1L1O75891 902 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 CCND1P24385 295 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 KPNB1Q14974 876 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 CCDC43Q96MW1 224 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 RPL26L1Q9UNX3 145 aaKnown RBP8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 C17orf50Q8WW18 174 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 TSPYL2Q9H2G4 693 aaPredicted RBP8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 DMRT2Q9Y5R5 561 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 UBE4BO95155 1302 aa8.36□□□□□ -1.07
SYNPO2-202ENST00000429713 AKR1B15C9JRZ8 316 aaPredicted RBP8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 FOXP2O15409 715 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 SART1O43290 800 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 MRGBPQ9NV56 204 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 MAGEA8P43361 318 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 ATP8B2P98198 1209 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 ERCC6LQ2NKX8 1250 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 IDH1O75874 414 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 VIMP08670 466 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 HSPA9P38646 679 aaKnown RBP8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 MUM1Q2TAK8 710 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 GPT2Q8TD30 523 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 RNF40O75150 1001 aa8.35□□□□□ -1.07
SYNPO2-202ENST00000429713 SGSM3Q96HU1 749 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms