RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 ANKRD62A6NC57 917 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 TBC1D10BQ4KMP7 808 aaPredicted RBP8.29□□□□□ -1.08
CNOT4-206ENST00000428680 METTL22Q9BUU2 404 aaPredicted RBP8.29□□□□□ -1.08
CNOT4-206ENST00000428680 GPCPD1Q9NPB8 672 aa8.29□□□□□ -1.08
CNOT4-206ENST00000428680 DKC1O60832 514 aaKnown RBP eCLIP8.28□□□□□ -1.08
CNOT4-206ENST00000428680 USP17L8P0C7I0 530 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 AMPD3Q01432 767 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 MAPKAPK5Q8IW41 473 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 MICAL1Q8TDZ2 1067 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 LPIN2Q92539 896 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 PLA2G12BQ9BX93 195 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 MLXIPQ9HAP2 919 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 ANKRD31Q8N7Z5 1873 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 ZBBXA8MT70 800 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 FLOT1O75955 427 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 MCM5P33992 734 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 USP8P40818 1118 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 METAP2P50579 478 aaKnown RBP eCLIP8.28□□□□□ -1.08
CNOT4-206ENST00000428680 RHPN1Q8TCX5 695 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 ERO1AQ96HE7 468 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 MYO6Q9UM54 1294 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 ZNF157P51786 506 aaPredicted RBP8.28□□□□□ -1.08
CNOT4-206ENST00000428680 CAPNS2Q96L46 248 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 ISCA1Q9BUE6 129 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 CSPG5O95196 566 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 PARP1P09874 1014 aaKnown RBP8.28□□□□□ -1.08
CNOT4-206ENST00000428680 GNPTABQ3T906 1256 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 RSPH3Q86UC2 560 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 SYNCQ9H7C4 482 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 AATFQ9NY61 560 aaKnown RBP eCLIP8.28□□□□□ -1.08
CNOT4-206ENST00000428680 CFAP45Q9UL16 551 aa8.28□□□□□ -1.08
CNOT4-206ENST00000428680 KRT85P78386 507 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 KIFC2Q96AC6 838 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 SLC26A6Q9BXS9 759 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 KCNH4Q9UQ05 1017 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 COL11A2P13942 1736 aaPredicted RBP8.27□□□□□ -1.09
CNOT4-206ENST00000428680 UBXN2AP68543 259 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 RGMBQ6NW40 437 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 NLRP10Q86W26 655 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 GBA2Q9HCG7 927 aaPredicted RBP8.27□□□□□ -1.09
CNOT4-206ENST00000428680 PAG1Q9NWQ8 432 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 ZHX1Q9UKY1 873 aaPredicted RBP8.27□□□□□ -1.09
CNOT4-206ENST00000428680 PNMA2Q9UL42 364 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 LRFN2Q9ULH4 789 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 ZBTB43O43298 467 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 UQCRHP07919 91 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 GNA11P29992 359 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 HUNKP57058 714 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 HDLBPQ00341 1268 aaKnown RBP8.27□□□□□ -1.09
CNOT4-206ENST00000428680 MLLT1Q03111 559 aaPredicted RBP8.27□□□□□ -1.09
CNOT4-206ENST00000428680 RETREG2Q8NC44 543 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 LRRC27Q9C0I9 530 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 GINM1Q9NU53 330 aa8.27□□□□□ -1.09
CNOT4-206ENST00000428680 PA2G4Q9UQ80 394 aaKnown RBP8.27□□□□□ -1.09
CNOT4-206ENST00000428680 MBD4O95243 580 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 FGFR1OPO95684 399 aaKnown RBP8.26□□□□□ -1.09
CNOT4-206ENST00000428680 SMC1AQ14683 1233 aaKnown RBP8.26□□□□□ -1.09
CNOT4-206ENST00000428680 CTU1Q7Z7A3 348 aaKnown RBP8.26□□□□□ -1.09
CNOT4-206ENST00000428680 TXLNBQ8N3L3 684 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 CSRNP1Q96S65 589 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 MROH5Q6ZUA9 1318 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 NEFHP12036 1026 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 ALAS1P13196 640 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 RTN1Q16799 776 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 TGFBRAP1Q8WUH2 860 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 PLEKHF1Q96S99 279 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 USP17L3A6NCW0 530 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 USP17L4A6NCW7 530 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 CCT2P78371 535 aaKnown RBP8.26□□□□□ -1.09
CNOT4-206ENST00000428680 HMGN5P82970 282 aaKnown RBP8.26□□□□□ -1.09
CNOT4-206ENST00000428680 SKOR2Q2VWA4 1001 aaPredicted RBP8.26□□□□□ -1.09
CNOT4-206ENST00000428680 USP17L1Q7RTZ2 530 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 NBPF11Q86T75 865 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 FERMT1Q9BQL6 677 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 SLFN5Q08AF3 891 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 GTF3C2Q8WUA4 911 aaPredicted RBP8.26□□□□□ -1.09
CNOT4-206ENST00000428680 ABCC4O15439 1325 aa8.26□□□□□ -1.09
CNOT4-206ENST00000428680 CFBP00751 764 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 RGS19P49795 217 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 USP14P54578 494 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 ZNF280AP59817 542 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 TIMM10P62072 90 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 STRIP1Q5VSL9 837 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 DPH6Q7L8W6 267 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 VPS36Q86VN1 386 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 RAB11FIP4Q86YS3 637 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 MTMR14Q8NCE2 650 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 RGS22Q8NE09 1264 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 PPP2R3CQ969Q6 453 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 GPR101Q96P66 508 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 MAP7D2Q96T17 732 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 FTOQ9C0B1 505 aaKnown RBP eCLIP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 ZNF804BA4D1E1 1349 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 A0A1B0GUL7 405 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 EPB41L2O43491 1005 aaKnown RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 ZBTB48P10074 688 aaPredicted RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 HSPA8P11142 646 aaKnown RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 HARSP12081 509 aaKnown RBP8.25□□□□□ -1.09
CNOT4-206ENST00000428680 PDE4AP27815 886 aa8.25□□□□□ -1.09
CNOT4-206ENST00000428680 SLC8A3P57103 927 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms