RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 FAM200AQ8TCP9 573 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 SUCLG2Q96I99 432 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 KCNG1Q9UIX4 513 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 KIAA0232Q92628 1395 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 ROBO2Q9HCK4 1378 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 KDM6BO15054 1643 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 FAM135BQ49AJ0 1406 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 TTC36A6NLP5 189 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 TAF5LO75529 589 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 UBLCP1Q8WVY7 318 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-208ENST00000428599 KDM5CP41229 1560 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 SHROOM2Q13796 1616 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 STX17P56962 302 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 GCKRQ14397 625 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 MCM6Q14566 821 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 ARHGEF6Q15052 776 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 XAGE2Q96GT9 111 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 TRERF1Q96PN7 1200 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 YWHAEP62258 255 aaKnown RBP9.96□□□□□ -0.82
CTNND1-208ENST00000428599 CNPY2Q9Y2B0 182 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 INSRP06213 1382 aa9.96□□□□□ -0.82
CTNND1-208ENST00000428599 WDR46O15213 610 aaKnown RBP9.95□□□□□ -0.82
CTNND1-208ENST00000428599 PRKG1Q13976 671 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 PPP2R5DQ14738 602 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 PLCB4Q15147 1175 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 MUM1L1Q5H9M0 696 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 CREB3L3Q68CJ9 461 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 RSPH14Q9UHP6 348 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 ZMYM4Q5VZL5 1548 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 OATP04181 439 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 KRT19P08727 400 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 ZYXQ15942 572 aaKnown RBP9.95□□□□□ -0.82
CTNND1-208ENST00000428599 DBNDD2Q9BQY9 259 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 NOC4LQ9BVI4 516 aaKnown RBP9.95□□□□□ -0.82
CTNND1-208ENST00000428599 PALM3A6NDB9 673 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-208ENST00000428599 KCNQ3O43525 872 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 USP48Q86UV5 1035 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 CNGA4Q8IV77 575 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 AS3MTQ9HBK9 375 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 PRDM10Q9NQV6 1147 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 GOLGA6CA6NDK9 693 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 GOLGA6BA6NDN3 693 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 ACTN4O43707 911 aaKnown RBP9.95□□□□□ -0.82
CTNND1-208ENST00000428599 GOLGA6DP0CG33 693 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 GPR162Q16538 588 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 LGSNQ5TDP6 509 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 SMC5Q8IY18 1101 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 QTRT2Q9H974 415 aaKnown RBP9.95□□□□□ -0.82
CTNND1-208ENST00000428599 GOLGA6AQ9NYA3 693 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 CSADQ9Y600 493 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 PPP2R5CQ13362 524 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 IL17REQ8NFR9 667 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 GTF3C6Q969F1 213 aa9.95□□□□□ -0.82
CTNND1-208ENST00000428599 H7C1D1 291 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 CASQ2O14958 399 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 CCNT1O60563 726 aaKnown RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 F13A1P00488 732 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 SLC12A2P55011 1212 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 LACTBP83111 547 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 ASIC2Q16515 512 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 ZSCAN23Q3MJ62 389 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 NCAPH2Q6IBW4 605 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 DCUN1D2Q6PH85 259 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 KRT222Q8N1A0 295 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 FAM193BQ96PV7 902 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 CHMLP26374 656 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 IRX5P78411 483 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 KLHL40Q2TBA0 621 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 FAM47CQ5HY64 1035 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 UTP14CQ5TAP6 766 aaKnown RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 SDCCAG8Q86SQ7 713 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 DNAJC25Q9H1X3 360 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 DACT1Q9NYF0 836 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 TRPC5Q9UL62 973 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 RAD50Q92878 1312 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 ZNF335Q9H4Z2 1342 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 MYOM2P54296 1465 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 VWA3AA6NCI4 1184 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 SARNPP82979 210 aaKnown RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 APOBRQ0VD83 1088 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 ZNF569Q5MCW4 686 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 NUF2Q9BZD4 464 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 HELLSQ9NRZ9 838 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 PDE4DQ08499 809 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 ZNF174Q15697 407 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 DPY19L2Q6NUT2 758 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 WDR66Q8TBY9 1149 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 DDX39AO00148 427 aaKnown RBP9.94□□□□□ -0.82
CTNND1-208ENST00000428599 XRCC6P12956 609 aaKnown RBP eCLIP9.94□□□□□ -0.822e-8■□□□□ 8.5
CTNND1-208ENST00000428599 NBPF3Q9H094 633 aa9.94□□□□□ -0.82
CTNND1-208ENST00000428599 CETN3O15182 167 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 GIGYF1O75420 1035 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-208ENST00000428599 TUBBP07437 444 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 NEDD9Q14511 834 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 CEP85LQ5SZL2 805 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 NSMFQ6X4W1 530 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 DHX32Q7L7V1 743 aaKnown RBP9.93□□□□□ -0.82
CTNND1-208ENST00000428599 NLRX1Q86UT6 975 aa9.93□□□□□ -0.82
CTNND1-208ENST00000428599 ANO3Q9BYT9 981 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms