RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 EPB41L4AQ9HCS5 686 aaPredicted RBP17.12■□□□□ 0.33
SCAP-206ENST00000428413 CIAO1O76071 339 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 CYP19A1P11511 503 aaPredicted RBP17.12■□□□□ 0.33
SCAP-206ENST00000428413 CCDC150Q8NCX0 1101 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 CCDC102AQ96A19 550 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 CDK5RAP3Q96JB5 506 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 USP17L8P0C7I0 530 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 TFAP4Q01664 338 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 MTF1Q14872 753 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 IGSF22Q8N9C0 903 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 TGFBRAP1Q8WUH2 860 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 CEP131Q9UPN4 1083 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 UBN2Q6ZU65 1347 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 NEMFO60524 1076 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 KRT2P35908 639 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 ARID5AQ03989 594 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 PDE4BQ07343 736 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 ARMCX5Q6P1M9 558 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 RABEP2Q9H5N1 569 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 MAGEC2Q9UBF1 373 aaPredicted RBP17.11■□□□□ 0.33
SCAP-206ENST00000428413 NRXN3Q9Y4C0 1643 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 GSG1L2A8MUP6 293 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 BRD2P25440 801 aaKnown RBP17.11■□□□□ 0.33
SCAP-206ENST00000428413 KLRK1P26718 216 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 EVCP57679 992 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 PTGDRQ13258 359 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 MRFAP1L1Q96HT8 127 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 PPP1R13BQ96KQ4 1090 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 CALCOCO1Q9P1Z2 691 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 DEXIO95424 95 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 LRRN4CLQ8ND94 238 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 DACH1Q9UI36 760 aa17.11■□□□□ 0.33
SCAP-206ENST00000428413 ZSCAN12O43309 604 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 STAT6P42226 847 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 MRPS25P82663 173 aaKnown RBP17.1■□□□□ 0.33
SCAP-206ENST00000428413 JAKMIP3Q5VZ66 844 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
SCAP-206ENST00000428413 KCNB2Q92953 911 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 TRIM47Q96LD4 638 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 SLC4A9Q96Q91 983 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 LY9Q9HBG7 655 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 POLR3EQ9NVU0 708 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 PTPROQ16827 1216 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 SOGA3Q5TF21 947 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.1■□□□□ 0.33
SCAP-206ENST00000428413 UBA5Q9GZZ9 404 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 GPR108Q9NPR9 543 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 ANKRD26Q9UPS8 1709 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 C3P01024 1663 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 RFC4P35249 363 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 GYS2P54840 703 aa17.1■□□□□ 0.33
SCAP-206ENST00000428413 UBE3CQ15386 1083 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 KIAA1328Q86T90 577 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 SLF1Q9BQI6 1058 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 CRNKL1Q9BZJ0 848 aaKnown RBP17.09■□□□□ 0.33
SCAP-206ENST00000428413 TEX33O43247 280 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 USP17L3A6NCW0 530 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 USP17L4A6NCW7 530 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 PP2D1A8MPX8 630 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 CUTAO60888 179 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 HIBADHP31937 336 aaKnown RBP17.09■□□□□ 0.33
SCAP-206ENST00000428413 RILPL1Q5EBL4 403 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 USP17L1Q7RTZ2 530 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 LRP10Q7Z4F1 713 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 TEX2Q8IWB9 1127 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 ENGASEQ8NFI3 743 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 DEF6Q9H4E7 631 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
SCAP-206ENST00000428413 UBXN1Q04323 297 aa17.08■□□□□ 0.33
SCAP-206ENST00000428413 TTC38Q5R3I4 469 aa17.08■□□□□ 0.33
SCAP-206ENST00000428413 FBXO38Q6PIJ6 1188 aa17.08■□□□□ 0.33
SCAP-206ENST00000428413 SOWAHDA6NJG2 315 aa17.08■□□□□ 0.32
SCAP-206ENST00000428413 INF2Q27J81 1249 aa17.08■□□□□ 0.32
SCAP-206ENST00000428413 SLC51AQ86UW1 340 aa17.08■□□□□ 0.32
SCAP-206ENST00000428413 KIF5CO60282 957 aa17.08■□□□□ 0.32
SCAP-206ENST00000428413 RNASE9P60153 205 aaKnown RBP17.08■□□□□ 0.32
SCAP-206ENST00000428413 DYMQ7RTS9 669 aa17.08■□□□□ 0.32
SCAP-206ENST00000428413 METTL16Q86W50 562 aaKnown RBP17.08■□□□□ 0.32
SCAP-206ENST00000428413 TBC1D7Q9P0N9 293 aa17.08■□□□□ 0.32
SCAP-206ENST00000428413 KRT18P05783 430 aaKnown RBP17.07■□□□□ 0.32
SCAP-206ENST00000428413 MTIF2P46199 727 aaKnown RBP17.07■□□□□ 0.32
SCAP-206ENST00000428413 ZCCHC17Q9NP64 241 aaKnown RBP17.07■□□□□ 0.32
SCAP-206ENST00000428413 MAN1B1Q9UKM7 699 aa17.07■□□□□ 0.32
SCAP-206ENST00000428413 FMR1Q06787 632 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCAP-206ENST00000428413 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
SCAP-206ENST00000428413 GPCPD1Q9NPB8 672 aa17.07■□□□□ 0.32
SCAP-206ENST00000428413 SPTLC3Q9NUV7 552 aa17.07■□□□□ 0.32
SCAP-206ENST00000428413 OGFRQ9NZT2 677 aa17.07■□□□□ 0.32
SCAP-206ENST00000428413 KDM4FA0A1W2PPD8 638 aa17.07■□□□□ 0.32
SCAP-206ENST00000428413 NAPAP54920 295 aa17.07■□□□□ 0.32
SCAP-206ENST00000428413 RPS8P62241 208 aaKnown RBP17.07■□□□□ 0.32
SCAP-206ENST00000428413 ADGRA1Q86SQ6 560 aa17.07■□□□□ 0.32
SCAP-206ENST00000428413 IGDCC4Q8TDY8 1250 aa17.07■□□□□ 0.32
SCAP-206ENST00000428413 ZSCAN10Q96SZ4 725 aaPredicted RBP17.07■□□□□ 0.32
SCAP-206ENST00000428413 ENC1O14682 589 aa17.06■□□□□ 0.32
SCAP-206ENST00000428413 TFRCP02786 760 aaKnown RBP17.06■□□□□ 0.32
SCAP-206ENST00000428413 VEGFAP15692 232 aaPredicted RBP17.06■□□□□ 0.32
SCAP-206ENST00000428413 E4F1Q66K89 784 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms