RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 GRAMD1CQ8IYS0 662 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 ZNF579Q8NAF0 562 aaKnown RBP12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 FAM237AA0A1B0GTK4 181 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 ADD2P35612 726 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 FMR1Q06787 632 aaKnown RBP eCLIP12.18□□□□□ -0.462e-20■■■■■ 71.1
ATP2C1-204ENST00000428331 MTF1Q14872 753 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 MRPL44Q9H9J2 332 aaKnown RBP12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 SRPRBQ9Y5M8 271 aaKnown RBP12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 EIF5P55010 431 aaKnown RBP12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 CASP7P55210 303 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 CASP8Q14790 479 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 NR1I3Q14994 352 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 CYB5R4Q7L1T6 521 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 IQUBQ8NA54 791 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 AFAP1L1Q8TED9 768 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 FAM89AQ96GI7 184 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 VPS16Q9H269 839 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 EFCC1Q9HA90 598 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 RMND1Q9NWS8 449 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 MYO6Q9UM54 1294 aa12.18□□□□□ -0.46
ATP2C1-204ENST00000428331 STK36Q9NRP7 1315 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 ATF3P18847 181 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 PI16Q6UXB8 463 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 FOXP4Q8IVH2 680 aaPredicted RBP12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 DHX37Q8IY37 1157 aaKnown RBP12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 A0A1B0GTH6 734 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 MFAP3LO75121 409 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 GSDMAQ96QA5 445 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 SLF1Q9BQI6 1058 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 TBC1D10CQ8IV04 446 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 IPO4Q8TEX9 1081 aaKnown RBP12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 FERMT2Q96AC1 680 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 MAP3K14Q99558 947 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 UBR1Q8IWV7 1749 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 GTF2A1P52655 376 aaPredicted RBP12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 KRT83P78385 493 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 SETQ01105 290 aaPredicted RBP12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 CHRNA2Q15822 529 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 CSRNP2Q9H175 543 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 HSD3B7Q9H2F3 369 aa12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 LUC7L2Q9Y383 392 aaKnown RBP12.17□□□□□ -0.46
ATP2C1-204ENST00000428331 UBN2Q6ZU65 1347 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 TEX33O43247 280 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 PDE6AP16499 860 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 SRLQ86TD4 932 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 SGMS1Q86VZ5 419 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 PPM1EQ8WY54 764 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 ZKSCAN3Q9BRR0 538 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 CTNND2Q9UQB3 1225 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 ABCC12Q96J65 1359 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 MINDY4BA8MYZ0 360 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 PATL2C9JE40 543 aaKnown RBP12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 SEMA3EO15041 775 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 KRT86O43790 486 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 MBD4O95243 580 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 ZNF18P17022 549 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 KRT2P35908 639 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 UBXN1Q04323 297 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 TOM1L2Q6ZVM7 507 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 TMEM139Q8IV31 216 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 KIFC2Q96AC6 838 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 LRP2BPQ9P2M1 347 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 MED1Q15648 1581 aaPredicted RBP12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 CYLC1P35663 651 aaPredicted RBP12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 DNAJC21Q5F1R6 531 aaKnown RBP12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 CDC5LQ99459 802 aaKnown RBP12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
ATP2C1-204ENST00000428331 SLC5A1P13866 664 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 GNAT2P19087 354 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 CTDSPL2Q05D32 466 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 SCARF1Q14162 830 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 BEND6Q5SZJ8 279 aaPredicted RBP12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 CATIPQ7Z7H3 387 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 INTS13Q9NVM9 706 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 SHTN1A0MZ66 631 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 CCDC122Q5T0U0 273 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 RPGRIP1Q96KN7 1286 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 STARD3NLO95772 234 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 GPTP24298 496 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 NR5A1Q13285 461 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 RAD9BQ6WBX8 426 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 IFNL3Q8IZI9 196 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 MAGEB6Q8N7X4 407 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 ACRBPQ8NEB7 543 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 ESR2Q92731 530 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 ZSWIM5Q9P217 1185 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 SLC4A4Q9Y6R1 1079 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 USP8P40818 1118 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 PAK1Q13153 545 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 RASGRP2Q7LDG7 609 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 ZCRB1Q8TBF4 217 aaKnown RBP12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 HAUS4Q9H6D7 363 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 FAM204AQ9H8W3 233 aa12.15□□□□□ -0.46
ATP2C1-204ENST00000428331 CYP27B1O15528 508 aa12.14□□□□□ -0.47
ATP2C1-204ENST00000428331 ITGA6P23229 1130 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms