RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TCRBV5S4A2TA0A5A2 114 aa22.31■■□□□ 1.16
PSPC1-202ENST00000427943 ATP5JP18859 108 aa22.31■■□□□ 1.16
PSPC1-202ENST00000427943 MTMR2Q13614 643 aa22.31■■□□□ 1.16
PSPC1-202ENST00000427943 SRRDQ9UH36 339 aa22.31■■□□□ 1.16
PSPC1-202ENST00000427943 MYPNQ86TC9 1320 aa22.31■■□□□ 1.16
PSPC1-202ENST00000427943 PRMT2P55345 433 aa22.3■■□□□ 1.16
PSPC1-202ENST00000427943 SLFNL1Q499Z3 407 aa22.3■■□□□ 1.16
PSPC1-202ENST00000427943 NBPF11Q86T75 865 aa22.3■■□□□ 1.16
PSPC1-202ENST00000427943 PNMA3Q9UL41 463 aa22.3■■□□□ 1.16
PSPC1-202ENST00000427943 BRCA2P51587 3418 aa22.29■■□□□ 1.16
PSPC1-202ENST00000427943 FCGRTP55899 365 aa22.29■■□□□ 1.16
PSPC1-202ENST00000427943 SH3D19Q5HYK7 790 aa22.29■■□□□ 1.16
PSPC1-202ENST00000427943 LCORLQ8N3X6 602 aa22.29■■□□□ 1.16
PSPC1-202ENST00000427943 ANKRD13CQ8N6S4 541 aa22.29■■□□□ 1.16
PSPC1-202ENST00000427943 YTHDC1Q96MU7 727 aaKnown RBP22.29■■□□□ 1.16
PSPC1-202ENST00000427943 HAUS7Q99871 368 aa22.29■■□□□ 1.16
PSPC1-202ENST00000427943 WDR18Q9BV38 432 aa22.29■■□□□ 1.16
PSPC1-202ENST00000427943 CRNKL1Q9BZJ0 848 aaKnown RBP22.29■■□□□ 1.16
PSPC1-202ENST00000427943 SERPINB13Q9UIV8 391 aa22.29■■□□□ 1.16
PSPC1-202ENST00000427943 GH2P01242 217 aa22.28■■□□□ 1.16
PSPC1-202ENST00000427943 HOXD10P28358 340 aa22.28■■□□□ 1.16
PSPC1-202ENST00000427943 EVX2Q03828 476 aa22.28■■□□□ 1.16
PSPC1-202ENST00000427943 PRKCZQ05513 592 aa22.28■■□□□ 1.16
PSPC1-202ENST00000427943 TTC6Q86TZ1 520 aa22.28■■□□□ 1.16
PSPC1-202ENST00000427943 RAET1EQ8TD07 263 aa22.28■■□□□ 1.16
PSPC1-202ENST00000427943 SDR42E1Q8WUS8 393 aa22.28■■□□□ 1.16
PSPC1-202ENST00000427943 EHD4Q9H223 541 aa22.28■■□□□ 1.16
PSPC1-202ENST00000427943 CHGBP05060 677 aa22.27■■□□□ 1.16
PSPC1-202ENST00000427943 EN2P19622 333 aaPredicted RBP22.27■■□□□ 1.16
PSPC1-202ENST00000427943 ADD2P35612 726 aa22.27■■□□□ 1.16
PSPC1-202ENST00000427943 PLCD1P51178 756 aa22.27■■□□□ 1.16
PSPC1-202ENST00000427943 RRP1P56182 461 aaKnown RBP22.27■■□□□ 1.16
PSPC1-202ENST00000427943 BACE1P56817 501 aa22.27■■□□□ 1.16
PSPC1-202ENST00000427943 TATDN1Q6P1N9 297 aa22.27■■□□□ 1.16
PSPC1-202ENST00000427943 TMEM106CQ9BVX2 250 aa22.27■■□□□ 1.16
PSPC1-202ENST00000427943 ARMT1Q9H993 441 aa22.27■■□□□ 1.16
PSPC1-202ENST00000427943 TMOD4Q9NZQ9 345 aa22.27■■□□□ 1.16
PSPC1-202ENST00000427943 GABRQQ9UN88 632 aa22.27■■□□□ 1.16
PSPC1-202ENST00000427943 POLR3DP05423 398 aaPredicted RBP22.26■■□□□ 1.15
PSPC1-202ENST00000427943 PABPC4Q13310 644 aaKnown RBP eCLIP22.26■■□□□ 1.15
PSPC1-202ENST00000427943 ASCC2Q9H1I8 757 aaPredicted RBP22.26■■□□□ 1.15
PSPC1-202ENST00000427943 DCTPP1Q9H773 170 aa22.26■■□□□ 1.15
PSPC1-202ENST00000427943 GINM1Q9NU53 330 aa22.26■■□□□ 1.15
PSPC1-202ENST00000427943 MCM9Q9NXL9 1143 aa22.26■■□□□ 1.15
PSPC1-202ENST00000427943 USP17L10C9JJH3 530 aa22.25■■□□□ 1.15
PSPC1-202ENST00000427943 MBD4O95243 580 aa22.25■■□□□ 1.15
PSPC1-202ENST00000427943 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.25■■□□□ 1.15
PSPC1-202ENST00000427943 PLXNB2O15031 1838 aa22.24■■□□□ 1.15
PSPC1-202ENST00000427943 TNPO2O14787 897 aaKnown RBP22.24■■□□□ 1.15
PSPC1-202ENST00000427943 GRK4P32298 578 aa22.24■■□□□ 1.15
PSPC1-202ENST00000427943 ZYXQ15942 572 aaKnown RBP22.24■■□□□ 1.15
PSPC1-202ENST00000427943 FAM110CQ1W6H9 321 aa22.24■■□□□ 1.15
PSPC1-202ENST00000427943 TSHZ3Q63HK5 1081 aa22.24■■□□□ 1.15
PSPC1-202ENST00000427943 DCP1AQ9NPI6 582 aaPredicted RBP22.24■■□□□ 1.15
PSPC1-202ENST00000427943 PCDHB15Q9Y5E8 787 aa22.24■■□□□ 1.15
PSPC1-202ENST00000427943 MKI67P46013 3256 aaKnown RBP22.24■■□□□ 1.15
PSPC1-202ENST00000427943 C19orf81C9J6K1 198 aa22.23■■□□□ 1.15
PSPC1-202ENST00000427943 PRKAB2O43741 272 aa22.23■■□□□ 1.15
PSPC1-202ENST00000427943 CYP2D6P10635 497 aa22.23■■□□□ 1.15
PSPC1-202ENST00000427943 SHMT1P34896 483 aa22.23■■□□□ 1.15
PSPC1-202ENST00000427943 IRX3P78415 501 aaPredicted RBP22.23■■□□□ 1.15
PSPC1-202ENST00000427943 RAB3GAP1Q15042 981 aa22.23■■□□□ 1.15
PSPC1-202ENST00000427943 ABCB5Q2M3G0 1257 aa22.23■■□□□ 1.15
PSPC1-202ENST00000427943 CERKLQ49MI3 558 aaPredicted RBP22.23■■□□□ 1.15
PSPC1-202ENST00000427943 FEZ1Q99689 392 aa22.23■■□□□ 1.15
PSPC1-202ENST00000427943 ECHDC1Q9NTX5 307 aa22.23■■□□□ 1.15
PSPC1-202ENST00000427943 GCLCP48506 637 aaPredicted RBP22.22■■□□□ 1.15
PSPC1-202ENST00000427943 MTFR1Q15390 333 aa22.22■■□□□ 1.15
PSPC1-202ENST00000427943 FLT3LGP49771 235 aa22.21■■□□□ 1.15
PSPC1-202ENST00000427943 GABPAQ06546 454 aa22.21■■□□□ 1.15
PSPC1-202ENST00000427943 EMILIN3Q9NT22 766 aa22.21■■□□□ 1.15
PSPC1-202ENST00000427943 BIN2Q9UBW5 565 aaPredicted RBP22.21■■□□□ 1.15
PSPC1-202ENST00000427943 PEX10O60683 326 aa22.2■■□□□ 1.14
PSPC1-202ENST00000427943 UBE3CQ15386 1083 aa22.2■■□□□ 1.14
PSPC1-202ENST00000427943 USP17L2Q6R6M4 530 aa22.2■■□□□ 1.14
PSPC1-202ENST00000427943 SLC44A5Q8NCS7 719 aa22.2■■□□□ 1.14
PSPC1-202ENST00000427943 GPATCH3Q96I76 525 aa22.2■■□□□ 1.14
PSPC1-202ENST00000427943 CRBNQ96SW2 442 aa22.2■■□□□ 1.14
PSPC1-202ENST00000427943 CABP5Q9NP86 173 aa22.2■■□□□ 1.14
PSPC1-202ENST00000427943 TAOK2Q9UL54 1235 aa22.2■■□□□ 1.14
PSPC1-202ENST00000427943 HOXA7P31268 230 aaPredicted RBP22.19■■□□□ 1.14
PSPC1-202ENST00000427943 ZSCAN25Q6NSZ9 544 aa22.19■■□□□ 1.14
PSPC1-202ENST00000427943 SLAIN1Q8ND83 568 aa22.19■■□□□ 1.14
PSPC1-202ENST00000427943 ACER1Q8TDN7 264 aa22.19■■□□□ 1.14
PSPC1-202ENST00000427943 COA7Q96BR5 231 aa22.19■■□□□ 1.14
PSPC1-202ENST00000427943 P2RX7Q99572 595 aaKnown RBP22.19■■□□□ 1.14
PSPC1-202ENST00000427943 CYP2D7A0A087X1C5 515 aa22.18■■□□□ 1.14
PSPC1-202ENST00000427943 MPHOSPH10O00566 681 aaKnown RBP22.18■■□□□ 1.14
PSPC1-202ENST00000427943 ADCY3O60266 1144 aa22.18■■□□□ 1.14
PSPC1-202ENST00000427943 ELNP15502 786 aa22.18■■□□□ 1.14
PSPC1-202ENST00000427943 GUCY1A2P33402 732 aa22.18■■□□□ 1.14
PSPC1-202ENST00000427943 HERVK_113P62684 666 aa22.18■■□□□ 1.14
PSPC1-202ENST00000427943 DYNLL2Q96FJ2 89 aa22.18■■□□□ 1.14
PSPC1-202ENST00000427943 PUS7LQ9H0K6 701 aaKnown RBP22.18■■□□□ 1.14
PSPC1-202ENST00000427943 ATP8A2Q9NTI2 1148 aa22.18■■□□□ 1.14
PSPC1-202ENST00000427943 MORF4L1Q9UBU8 362 aa22.18■■□□□ 1.14
PSPC1-202ENST00000427943 SMIM22K7EJ46 135 aa22.17■■□□□ 1.14
PSPC1-202ENST00000427943 CCL5P13501 91 aa22.17■■□□□ 1.14
PSPC1-202ENST00000427943 SEPT2Q15019 361 aa22.17■■□□□ 1.14
PSPC1-202ENST00000427943 PRPF38BQ5VTL8 546 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms