RNA–Protein interactions for RNA: ENST00000427419.5

SLC40A1-204, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-204ENST00000427419 ERC2O15083 957 aa12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 CYP2C8P10632 490 aa12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 PSMC4P43686 418 aa12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 BCL11AQ9H165 835 aa12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 DNAJC18Q9H819 358 aa12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 CABP5Q9NP86 173 aa12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 MCM9Q9NXL9 1143 aa12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 SRRDQ9UH36 339 aa12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 SWAP70Q9UH65 585 aa12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 RBBP6Q7Z6E9 1792 aaKnown RBP12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 DDX60LQ5H9U9 1706 aaKnown RBP12.14□□□□□ -0.47
SLC40A1-204ENST00000427419 MGAMO43451 1857 aa12.13□□□□□ -0.47
SLC40A1-204ENST00000427419 ZFYP08048 801 aaPredicted RBP12.13□□□□□ -0.47
SLC40A1-204ENST00000427419 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
SLC40A1-204ENST00000427419 HOXA7P31268 230 aaPredicted RBP12.13□□□□□ -0.47
SLC40A1-204ENST00000427419 USP14P54578 494 aa12.13□□□□□ -0.47
SLC40A1-204ENST00000427419 HMGCS2P54868 508 aa12.13□□□□□ -0.47
SLC40A1-204ENST00000427419 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
SLC40A1-204ENST00000427419 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
SLC40A1-204ENST00000427419 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
SLC40A1-204ENST00000427419 PTCH2Q9Y6C5 1203 aa12.13□□□□□ -0.47
SLC40A1-204ENST00000427419 SMARCA5O60264 1052 aaPredicted RBP12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 MTMR2Q13614 643 aa12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 RRP1BQ14684 758 aaKnown RBP12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 ABCB5Q2M3G0 1257 aa12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 USP17L2Q6R6M4 530 aa12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 LCORLQ8N3X6 602 aa12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 KBTBD3Q8NAB2 608 aa12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 RAET1EQ8TD07 263 aa12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 GCC1Q96CN9 775 aa12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 ZNF333Q96JL9 665 aa12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 DCP1AQ9NPI6 582 aaPredicted RBP12.12□□□□□ -0.47
SLC40A1-204ENST00000427419 MYPNQ86TC9 1320 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 GLRX3O76003 335 aaKnown RBP12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 MBD4O95243 580 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 GDF11O95390 407 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 GH2P01242 217 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 CAPN2P17655 700 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 GABPAQ06546 454 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 TREML2Q5T2D2 321 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 CCDC84Q86UT8 332 aaPredicted RBP12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 COA7Q96BR5 231 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 EDC3Q96F86 508 aaKnown RBP12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 TRIM47Q96LD4 638 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 C12orf42Q96LP6 360 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 YTHDC1Q96MU7 727 aaKnown RBP12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 FEZ1Q99689 392 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 ARHGAP39Q9C0H5 1083 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 PCDHB15Q9Y5E8 787 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 MYH8P13535 1937 aa12.11□□□□□ -0.47
SLC40A1-204ENST00000427419 TNPO2O14787 897 aaKnown RBP12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 GNAT2P19087 354 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 PLCD1P51178 756 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 UBXN2AP68543 259 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 CAP1Q01518 475 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 SLC4A8Q2Y0W8 1093 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 GIMAP6Q6P9H5 292 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 SLAIN1Q8ND83 568 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 SDR42E1Q8WUS8 393 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 CCDC17Q96LX7 622 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 KIAA1683Q9H0B3 1180 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 ASCC2Q9H1I8 757 aaPredicted RBP12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 ARMT1Q9H993 441 aa12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 ARPP21Q9UBL0 812 aaPredicted RBP12.1□□□□□ -0.47
SLC40A1-204ENST00000427419 KIAA0100Q14667 2235 aaKnown RBP12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 GRK4P32298 578 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 SHMT1P34896 483 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 IRF5Q13568 498 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 RAB3GAP1Q15042 981 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 TMEM179Q6ZVK1 233 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 NKX2-3Q8TAU0 364 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 PXYLP1Q8TE99 480 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 APPBP2Q92624 585 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 CRBNQ96SW2 442 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 SH2D4AQ9H788 454 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 MORF4L1Q9UBU8 362 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 SLC4A4Q9Y6R1 1079 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 ZSWIM8A7E2V4 1837 aa12.09□□□□□ -0.47
SLC40A1-204ENST00000427419 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 RNF113AO15541 343 aaKnown RBP12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 MX1P20591 662 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 CTGFP29279 349 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 USP17L24Q0WX57 530 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 TICAM2Q86XR7 235 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 ZNF287Q9HBT7 754 aa12.08□□□□□ -0.48
SLC40A1-204ENST00000427419 BAZ2AQ9UIF9 1905 aaKnown RBP12.07□□□□□ -0.48
SLC40A1-204ENST00000427419 MPHOSPH10O00566 681 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms