RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 POTEEQ6S8J3 1075 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 MAPKAPK5Q8IW41 473 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 GPRC5AQ8NFJ5 357 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 AS3MTQ9HBK9 375 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 AATFQ9NY61 560 aaKnown RBP eCLIP10.71□□□□□ -0.69
VNN3-208ENST00000427187 RBPJLQ9UBG7 517 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
VNN3-208ENST00000427187 MCAMP43121 646 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 ERVK-9P63128 1117 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 ERVK-24P63145 666 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 GSTO1P78417 241 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 PDE3AQ14432 1141 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 ZYXQ15942 572 aaKnown RBP10.7□□□□□ -0.7
VNN3-208ENST00000427187 ALDH1L2Q3SY69 923 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 GORABQ5T7V8 394 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 LHX8Q68G74 356 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 GPR142Q7Z601 462 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 ADGRA1Q86SQ6 560 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.7□□□□□ -0.7
VNN3-208ENST00000427187 TGFBRAP1Q8WUH2 860 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 SOCS4Q8WXH5 440 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 GUCD1Q96NT3 240 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 SNRKQ9NRH2 765 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 SAP30BPQ9UHR5 308 aaKnown RBP10.7□□□□□ -0.7
VNN3-208ENST00000427187 AKAP2Q9Y2D5 859 aa10.7□□□□□ -0.7
VNN3-208ENST00000427187 MYO5AQ9Y4I1 1855 aaKnown RBP10.7□□□□□ -0.7
VNN3-208ENST00000427187 ZBTB22O15209 634 aa10.69□□□□□ -0.7
VNN3-208ENST00000427187 LDHCP07864 332 aa10.69□□□□□ -0.7
VNN3-208ENST00000427187 HOXA7P31268 230 aaPredicted RBP10.69□□□□□ -0.7
VNN3-208ENST00000427187 ATN1P54259 1190 aaPredicted RBP10.69□□□□□ -0.7
VNN3-208ENST00000427187 CCAR1Q8IX12 1150 aaKnown RBP10.69□□□□□ -0.7
VNN3-208ENST00000427187 USP6NLQ92738 828 aa10.69□□□□□ -0.7
VNN3-208ENST00000427187 WDR18Q9BV38 432 aa10.69□□□□□ -0.7
VNN3-208ENST00000427187 TBC1D2Q9BYX2 928 aa10.69□□□□□ -0.7
VNN3-208ENST00000427187 CWC22Q9HCG8 908 aaKnown RBP10.69□□□□□ -0.7
VNN3-208ENST00000427187 FLRT1Q9NZU1 646 aa10.69□□□□□ -0.7
VNN3-208ENST00000427187 LRP2BPQ9P2M1 347 aa10.69□□□□□ -0.7
VNN3-208ENST00000427187 PI4KBQ9UBF8 816 aa10.69□□□□□ -0.7
VNN3-208ENST00000427187 HERC5Q9UII4 1024 aaKnown RBP10.69□□□□□ -0.7
VNN3-208ENST00000427187 PALD1Q9ULE6 856 aa10.69□□□□□ -0.7
VNN3-208ENST00000427187 MAST2Q6P0Q8 1798 aa10.69□□□□□ -0.7
VNN3-208ENST00000427187 FOCADQ5VW36 1801 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 FLT1P17948 1338 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 USP17L10C9JJH3 530 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 ASNSP08243 561 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 XRCC5P13010 732 aaKnown RBP10.68□□□□□ -0.7
VNN3-208ENST00000427187 ARID4AP29374 1257 aaPredicted RBP10.68□□□□□ -0.7
VNN3-208ENST00000427187 MAPK4P31152 587 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 RGS2P41220 211 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 MORN1Q5T089 497 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 WDR78Q5VTH9 848 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 PLEKHH3Q7Z736 793 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 CRACR2BQ8N4Y2 399 aaPredicted RBP10.68□□□□□ -0.7
VNN3-208ENST00000427187 APBA2Q99767 749 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 TRIM34Q9BYJ4 488 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 SENP6Q9GZR1 1112 aaPredicted RBP10.68□□□□□ -0.7
VNN3-208ENST00000427187 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 ZBTB21Q9ULJ3 1066 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 PRUNE2Q8WUY3 3088 aa10.68□□□□□ -0.7
VNN3-208ENST00000427187 CNMDO75829 334 aa10.67□□□□□ -0.7
VNN3-208ENST00000427187 CNGA1P29973 690 aa10.67□□□□□ -0.7
VNN3-208ENST00000427187 NAA16Q6N069 864 aaPredicted RBP10.67□□□□□ -0.7
VNN3-208ENST00000427187 NOL10Q9BSC4 688 aaKnown RBP10.67□□□□□ -0.7
VNN3-208ENST00000427187 API5Q9BZZ5 524 aaKnown RBP10.67□□□□□ -0.7
VNN3-208ENST00000427187 LTBP2Q14767 1821 aa10.66□□□□□ -0.7
VNN3-208ENST00000427187 PNMA6EA0A0J9YXQ4 647 aa10.66□□□□□ -0.7
VNN3-208ENST00000427187 C19orf81C9J6K1 198 aa10.66□□□□□ -0.7
VNN3-208ENST00000427187 POTEB2H3BUK9 544 aa10.66□□□□□ -0.7
VNN3-208ENST00000427187 MAP4K4O95819 1239 aaPredicted RBP10.66□□□□□ -0.7
VNN3-208ENST00000427187 GH2P01242 217 aa10.66□□□□□ -0.7
VNN3-208ENST00000427187 DYNLL1P63167 89 aaKnown RBP10.66□□□□□ -0.7
VNN3-208ENST00000427187 MAP2K5Q13163 448 aa10.66□□□□□ -0.7
VNN3-208ENST00000427187 TRMT44Q8IYL2 757 aaKnown RBP10.66□□□□□ -0.7
VNN3-208ENST00000427187 FEZ1Q99689 392 aa10.66□□□□□ -0.7
VNN3-208ENST00000427187 LBHD1Q9BQE6 289 aaPredicted RBP10.66□□□□□ -0.7
VNN3-208ENST00000427187 DHX36Q9H2U1 1008 aaKnown RBP10.66□□□□□ -0.7
VNN3-208ENST00000427187 TNNQ9UQP3 1299 aa10.66□□□□□ -0.7
VNN3-208ENST00000427187 MYH1P12882 1939 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 BAG3O95817 575 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
VNN3-208ENST00000427187 CYP2C19P33261 490 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 MTX1Q13505 466 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 GJC2Q5T442 439 aaPredicted RBP10.65□□□□□ -0.7
VNN3-208ENST00000427187 ZNF697Q5TEC3 545 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 ANO1Q5XXA6 986 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 USP17L2Q6R6M4 530 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 TRPV1Q8NER1 839 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 NPLOC4Q8TAT6 608 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 EDC3Q96F86 508 aaKnown RBP10.65□□□□□ -0.7
VNN3-208ENST00000427187 DBNDD2Q9BQY9 259 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 DDX20Q9UHI6 824 aaKnown RBP10.65□□□□□ -0.7
VNN3-208ENST00000427187 HDAC5Q9UQL6 1122 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 ATP11BQ9Y2G3 1177 aa10.65□□□□□ -0.7
VNN3-208ENST00000427187 TTC28Q96AY4 2481 aa10.64□□□□□ -0.71
VNN3-208ENST00000427187 CYP2E1P05181 493 aaPredicted RBP10.64□□□□□ -0.71
VNN3-208ENST00000427187 UQCRFS1P1P0C7P4 283 aa10.64□□□□□ -0.71
VNN3-208ENST00000427187 RTP1P59025 263 aa10.64□□□□□ -0.71
VNN3-208ENST00000427187 SHHQ15465 462 aa10.64□□□□□ -0.71
VNN3-208ENST00000427187 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
VNN3-208ENST00000427187 C9orf50Q5SZB4 431 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms