RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 CYP7A1P22680 504 aa12.29□□□□□ -0.44
GACAT3-201ENST00000426539 UBXN2AP68543 259 aa12.29□□□□□ -0.44
GACAT3-201ENST00000426539 MTMR2Q13614 643 aa12.29□□□□□ -0.44
GACAT3-201ENST00000426539 FOXP4Q8IVH2 680 aaPredicted RBP12.29□□□□□ -0.44
GACAT3-201ENST00000426539 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
GACAT3-201ENST00000426539 PXYLP1Q8TE99 480 aa12.29□□□□□ -0.44
GACAT3-201ENST00000426539 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
GACAT3-201ENST00000426539 SAP30BPQ9UHR5 308 aaKnown RBP12.29□□□□□ -0.44
GACAT3-201ENST00000426539 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
GACAT3-201ENST00000426539 EXOC6BQ9Y2D4 811 aa12.29□□□□□ -0.44
GACAT3-201ENST00000426539 LOC285556D6RIA3 1793 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 MGAMO43451 1857 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 PEX10O60683 326 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 IDH1O75874 414 aaKnown RBP12.28□□□□□ -0.44
GACAT3-201ENST00000426539 GDF11O95390 407 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 SGPL1O95470 568 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 GCLCP48506 637 aaPredicted RBP12.28□□□□□ -0.44
GACAT3-201ENST00000426539 FXR1P51114 621 aaKnown RBP eCLIP12.28□□□□□ -0.44
GACAT3-201ENST00000426539 BACE1P56817 501 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 PIP4P2Q8N4L2 257 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 MIGA1Q8NAN2 632 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 AS3MTQ9HBK9 375 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
GACAT3-201ENST00000426539 GJD2Q9UKL4 321 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 ZBED9Q6R2W3 1325 aa12.28□□□□□ -0.44
GACAT3-201ENST00000426539 ASNSP08243 561 aa12.27□□□□□ -0.45
GACAT3-201ENST00000426539 HOXA7P31268 230 aaPredicted RBP12.27□□□□□ -0.45
GACAT3-201ENST00000426539 DIEXFQ68CQ4 756 aaKnown RBP12.27□□□□□ -0.45
GACAT3-201ENST00000426539 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
GACAT3-201ENST00000426539 AACSQ86V21 672 aa12.27□□□□□ -0.45
GACAT3-201ENST00000426539 MAGEB6Q8N7X4 407 aa12.27□□□□□ -0.45
GACAT3-201ENST00000426539 COA7Q96BR5 231 aa12.27□□□□□ -0.45
GACAT3-201ENST00000426539 P2RX7Q99572 595 aaKnown RBP12.27□□□□□ -0.45
GACAT3-201ENST00000426539 TXNRD2Q9NNW7 524 aa12.27□□□□□ -0.45
GACAT3-201ENST00000426539 PAK6Q9NQU5 681 aaPredicted RBP12.27□□□□□ -0.45
GACAT3-201ENST00000426539 MORF4L1Q9UBU8 362 aa12.27□□□□□ -0.45
GACAT3-201ENST00000426539 ZBTB21Q9ULJ3 1066 aa12.27□□□□□ -0.45
GACAT3-201ENST00000426539 FARP2O94887 1054 aaPredicted RBP12.26□□□□□ -0.45
GACAT3-201ENST00000426539 PABPC4Q13310 644 aaKnown RBP eCLIP12.26□□□□□ -0.45
GACAT3-201ENST00000426539 CRACR2BQ8N4Y2 399 aaPredicted RBP12.26□□□□□ -0.45
GACAT3-201ENST00000426539 DPF3Q92784 378 aa12.26□□□□□ -0.45
GACAT3-201ENST00000426539 DEFB118Q96PH6 123 aa12.26□□□□□ -0.45
GACAT3-201ENST00000426539 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
GACAT3-201ENST00000426539 IL1RAPL2Q9NP60 686 aa12.26□□□□□ -0.45
GACAT3-201ENST00000426539 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
GACAT3-201ENST00000426539 GINM1Q9NU53 330 aa12.26□□□□□ -0.45
GACAT3-201ENST00000426539 TAOK2Q9UL54 1235 aa12.26□□□□□ -0.45
GACAT3-201ENST00000426539 ATAD5Q96QE3 1844 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 MYO5AQ9Y4I1 1855 aaKnown RBP12.25□□□□□ -0.45
GACAT3-201ENST00000426539 C19orf81C9J6K1 198 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 USP17L10C9JJH3 530 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 GH2P01242 217 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 HLA-DOAP06340 250 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
GACAT3-201ENST00000426539 TRIM32Q13049 653 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 TATDN1Q6P1N9 297 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 SIRT2Q8IXJ6 389 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 RHPN1Q8TCX5 695 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 RIOK1Q9BRS2 568 aaKnown RBP12.25□□□□□ -0.45
GACAT3-201ENST00000426539 TMOD4Q9NZQ9 345 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 RBPJLQ9UBG7 517 aa12.25□□□□□ -0.45
GACAT3-201ENST00000426539 USP5P45974 858 aa12.24□□□□□ -0.45
GACAT3-201ENST00000426539 HERVK_113P62684 666 aa12.24□□□□□ -0.45
GACAT3-201ENST00000426539 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
GACAT3-201ENST00000426539 EVX2Q03828 476 aa12.24□□□□□ -0.45
GACAT3-201ENST00000426539 Q3C1V9 767 aa12.24□□□□□ -0.45
GACAT3-201ENST00000426539 FOCADQ5VW36 1801 aa12.24□□□□□ -0.45
GACAT3-201ENST00000426539 ERC1Q8IUD2 1116 aa12.24□□□□□ -0.45
GACAT3-201ENST00000426539 CDK5RAP2Q96SN8 1893 aa12.24□□□□□ -0.45
GACAT3-201ENST00000426539 TRIM34Q9BYJ4 488 aa12.24□□□□□ -0.45
GACAT3-201ENST00000426539 EHD4Q9H223 541 aa12.24□□□□□ -0.45
GACAT3-201ENST00000426539 DOCK3Q8IZD9 2030 aa12.23□□□□□ -0.45
GACAT3-201ENST00000426539 TFRCP02786 760 aaKnown RBP12.23□□□□□ -0.45
GACAT3-201ENST00000426539 HMGCRP04035 888 aa12.23□□□□□ -0.45
GACAT3-201ENST00000426539 PLCD1P51178 756 aa12.23□□□□□ -0.45
GACAT3-201ENST00000426539 MAP3K12Q12852 859 aa12.23□□□□□ -0.45
GACAT3-201ENST00000426539 DIS3LQ8TF46 1054 aaKnown RBP12.23□□□□□ -0.45
GACAT3-201ENST00000426539 TRIB2Q92519 343 aa12.23□□□□□ -0.45
GACAT3-201ENST00000426539 HTATIP2Q9BUP3 242 aa12.23□□□□□ -0.45
GACAT3-201ENST00000426539 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.23□□□□□ -0.45
GACAT3-201ENST00000426539 PRO3102Q9H379 93 aa12.23□□□□□ -0.45
GACAT3-201ENST00000426539 ZBTB40Q9NUA8 1239 aa12.23□□□□□ -0.45
GACAT3-201ENST00000426539 RBM27Q9P2N5 1060 aaKnown RBP12.23□□□□□ -0.45
GACAT3-201ENST00000426539 SERPINB13Q9UIV8 391 aa12.23□□□□□ -0.45
GACAT3-201ENST00000426539 CNMDO75829 334 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 PDE6AP16499 860 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 CYP2B6P20813 491 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 GUCY1A2P33402 732 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 SHMT1P34896 483 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
GACAT3-201ENST00000426539 HSP90AB4PQ58FF6 505 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 USP17L2Q6R6M4 530 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 CERS3Q8IU89 383 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 GPRC5AQ8NFJ5 357 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 ACER1Q8TDN7 264 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 USP6NLQ92738 828 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 EDC3Q96F86 508 aaKnown RBP12.22□□□□□ -0.45
GACAT3-201ENST00000426539 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 PORCNQ9H237 461 aa12.22□□□□□ -0.45
GACAT3-201ENST00000426539 COG6Q9Y2V7 657 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms