RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 CPLX2Q6PUV4 134 aaKnown RBP17.68■□□□□ 0.42
GINS3-203ENST00000426538 RAB11FIP4Q86YS3 637 aa17.68■□□□□ 0.42
GINS3-203ENST00000426538 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
GINS3-203ENST00000426538 CNOT7Q9UIV1 285 aaKnown RBP17.68■□□□□ 0.42
GINS3-203ENST00000426538 KIF3AQ9Y496 699 aa17.68■□□□□ 0.42
GINS3-203ENST00000426538 DDX60LQ5H9U9 1706 aaKnown RBP17.68■□□□□ 0.42
GINS3-203ENST00000426538 TCP10L2B9ZVM9 353 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 WNT10BO00744 389 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 YBX3P16989 372 aaKnown RBP eCLIP17.67■□□□□ 0.42
GINS3-203ENST00000426538 PDCP20941 246 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 ZNF280AP59817 542 aaPredicted RBP17.67■□□□□ 0.42
GINS3-203ENST00000426538 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 CATIPQ7Z7H3 387 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 FAM184AQ8NB25 1140 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 EHD4Q9H223 541 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 VEZTQ9HBM0 779 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 TCP11L1Q9NUJ3 509 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 DDTLA6NHG4 134 aaPredicted RBP17.67■□□□□ 0.42
GINS3-203ENST00000426538 GOLGA8AA7E2F4 631 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 RBM26Q5T8P6 1007 aaKnown RBP17.67■□□□□ 0.42
GINS3-203ENST00000426538 LARP1BQ659C4 914 aaKnown RBP17.67■□□□□ 0.42
GINS3-203ENST00000426538 FOXP4Q8IVH2 680 aaPredicted RBP17.67■□□□□ 0.42
GINS3-203ENST00000426538 MICALL2Q8IY33 904 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 ZNF654Q8IZM8 581 aa17.67■□□□□ 0.42
GINS3-203ENST00000426538 NSUN7Q8NE18 718 aaKnown RBP17.67■□□□□ 0.42
GINS3-203ENST00000426538 UTRNP46939 3433 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 WDR33Q9C0J8 1336 aaKnown RBP17.66■□□□□ 0.42
GINS3-203ENST00000426538 ZNF541Q9H0D2 1346 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 CCDC196A0A1B0GTZ2 297 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 H7C1D1 291 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 NMT2O60551 498 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 DTNBO60941 627 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 RXRAP19793 462 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 SYT1P21579 422 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 RCAN1P53805 252 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 PKP1Q13835 747 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 NBPF9Q3BBW0 867 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 FKBP1CQ5VVH2 108 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 CCDC144CPQ8IYA2 1237 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 GPC2Q8N158 579 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 NUP133Q8WUM0 1156 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 TNPO1Q92973 898 aaKnown RBP17.66■□□□□ 0.42
GINS3-203ENST00000426538 MYL10Q9BUA6 226 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 RNF181Q9P0P0 153 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 TAOK2Q9UL54 1235 aa17.66■□□□□ 0.42
GINS3-203ENST00000426538 STX6O43752 255 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 JAK2O60674 1132 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 CDKL5O76039 1030 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 CALM1P0DP23 149 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 CALM2P0DP24 149 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 CALM3P0DP25 149 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 ADD1P35611 737 aaKnown RBP17.65■□□□□ 0.42
GINS3-203ENST00000426538 PPP2R5BQ15173 497 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 GPR162Q16538 588 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 NEDD1Q8NHV4 660 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 FAM151AQ8WW52 585 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 DDX11Q96FC9 970 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 ZBED3Q96IU2 234 aaPredicted RBP17.65■□□□□ 0.42
GINS3-203ENST00000426538 IL17RBQ9NRM6 502 aa17.65■□□□□ 0.42
GINS3-203ENST00000426538 SHTN1A0MZ66 631 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 CTDNEP1O95476 244 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 CSRNP1Q96S65 589 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 KAT14Q9H8E8 782 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 DICER1Q9UPY3 1922 aaKnown RBP17.64■□□□□ 0.41
GINS3-203ENST00000426538 BRD1O95696 1058 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 TNNI2P48788 182 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 RTN1Q16799 776 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 SH3BP5LQ7L8J4 393 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 FAM83AQ86UY5 434 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 FANCBQ8NB91 859 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 CCDC17Q96LX7 622 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 STX8Q9UNK0 236 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.41
GINS3-203ENST00000426538 ATRNL1Q5VV63 1379 aa17.63■□□□□ 0.41
GINS3-203ENST00000426538 CDC27P30260 824 aa17.63■□□□□ 0.41
GINS3-203ENST00000426538 TBC1D10BQ4KMP7 808 aaPredicted RBP17.63■□□□□ 0.41
GINS3-203ENST00000426538 FOXD4L5Q5VV16 416 aaPredicted RBP17.63■□□□□ 0.41
GINS3-203ENST00000426538 SAMD7Q7Z3H4 446 aa17.63■□□□□ 0.41
GINS3-203ENST00000426538 FOXD4L4Q8WXT5 416 aaPredicted RBP17.63■□□□□ 0.41
GINS3-203ENST00000426538 ANKS1AQ92625 1134 aa17.63■□□□□ 0.41
GINS3-203ENST00000426538 GBP4Q96PP9 640 aa17.63■□□□□ 0.41
GINS3-203ENST00000426538 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
GINS3-203ENST00000426538 SBF1O95248 1867 aa17.62■□□□□ 0.41
GINS3-203ENST00000426538 COL2A1P02458 1487 aaPredicted RBP17.62■□□□□ 0.41
GINS3-203ENST00000426538 DDAH1O94760 285 aa17.62■□□□□ 0.41
GINS3-203ENST00000426538 SHMT1P34896 483 aa17.62■□□□□ 0.41
GINS3-203ENST00000426538 TNFAIP1Q13829 316 aa17.62■□□□□ 0.41
GINS3-203ENST00000426538 NFKBIBQ15653 356 aa17.62■□□□□ 0.41
GINS3-203ENST00000426538 RCSD1Q6JBY9 416 aa17.62■□□□□ 0.41
GINS3-203ENST00000426538 NID2Q14112 1375 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 VPS37CA5D8V6 355 aaPredicted RBP17.61■□□□□ 0.41
GINS3-203ENST00000426538 H3BQV1 296 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 MPHOSPH10O00566 681 aaKnown RBP17.61■□□□□ 0.41
GINS3-203ENST00000426538 KIF4BQ2VIQ3 1234 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 CERKLQ49MI3 558 aaPredicted RBP17.61■□□□□ 0.41
GINS3-203ENST00000426538 IFFO2Q5TF58 517 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 C9orf131Q5VYM1 1079 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms