RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 LAMA3Q16787 3333 aa18.04■□□□□ 0.48
PDAP1-202ENST00000426447 COL2A1P02458 1487 aaPredicted RBP18.04■□□□□ 0.48
PDAP1-202ENST00000426447 CCND3P30281 292 aaPredicted RBP18.04■□□□□ 0.48
PDAP1-202ENST00000426447 LRRC26Q2I0M4 334 aa18.04■□□□□ 0.48
PDAP1-202ENST00000426447 Q3C1V9 767 aa18.04■□□□□ 0.48
PDAP1-202ENST00000426447 FOXP4Q8IVH2 680 aaPredicted RBP18.04■□□□□ 0.48
PDAP1-202ENST00000426447 LBHD1Q9BQE6 289 aaPredicted RBP18.04■□□□□ 0.48
PDAP1-202ENST00000426447 COL6A3P12111 3177 aa18.04■□□□□ 0.48
PDAP1-202ENST00000426447 GNAI3P08754 354 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 COL6A1P12109 1028 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 PLCG2P16885 1265 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 ERVK-9P63128 1117 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 ERVK-24P63145 666 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 CCL14Q16627 93 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 LHX8Q68G74 356 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 NAA16Q6N069 864 aaPredicted RBP18.03■□□□□ 0.48
PDAP1-202ENST00000426447 GPR142Q7Z601 462 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 PLEKHH3Q7Z736 793 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 GTF3C2Q8WUA4 911 aaPredicted RBP18.03■□□□□ 0.48
PDAP1-202ENST00000426447 TGFBRAP1Q8WUH2 860 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 CDCA7LQ96GN5 454 aa18.03■□□□□ 0.48
PDAP1-202ENST00000426447 AATFQ9NY61 560 aaKnown RBP eCLIP18.03■□□□□ 0.48
PDAP1-202ENST00000426447 GDF11O95390 407 aa18.02■□□□□ 0.48
PDAP1-202ENST00000426447 UQCRFS1P1P0C7P4 283 aa18.02■□□□□ 0.48
PDAP1-202ENST00000426447 ARID4AP29374 1257 aaPredicted RBP18.02■□□□□ 0.48
PDAP1-202ENST00000426447 G3BP1Q13283 466 aaKnown RBP eCLIP18.02■□□□□ 0.48
PDAP1-202ENST00000426447 DDX60LQ5H9U9 1706 aaKnown RBP18.02■□□□□ 0.48
PDAP1-202ENST00000426447 MAPKAPK5Q8IW41 473 aa18.02■□□□□ 0.48
PDAP1-202ENST00000426447 SENP6Q9GZR1 1112 aaPredicted RBP18.02■□□□□ 0.48
PDAP1-202ENST00000426447 PORCNQ9H237 461 aa18.02■□□□□ 0.48
PDAP1-202ENST00000426447 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.02■□□□□ 0.48
PDAP1-202ENST00000426447 GLRX3O76003 335 aaKnown RBP18.01■□□□□ 0.47
PDAP1-202ENST00000426447 MCAMP43121 646 aa18.01■□□□□ 0.47
PDAP1-202ENST00000426447 JAG1P78504 1218 aa18.01■□□□□ 0.47
PDAP1-202ENST00000426447 MORN1Q5T089 497 aa18.01■□□□□ 0.47
PDAP1-202ENST00000426447 WDR78Q5VTH9 848 aa18.01■□□□□ 0.47
PDAP1-202ENST00000426447 USP6NLQ92738 828 aa18.01■□□□□ 0.47
PDAP1-202ENST00000426447 EDC3Q96F86 508 aaKnown RBP18.01■□□□□ 0.47
PDAP1-202ENST00000426447 APBA2Q99767 749 aa18.01■□□□□ 0.47
PDAP1-202ENST00000426447 COL25A1Q9BXS0 654 aaPredicted RBP18.01■□□□□ 0.47
PDAP1-202ENST00000426447 GINM1Q9NU53 330 aa18.01■□□□□ 0.47
PDAP1-202ENST00000426447 PALD1Q9ULE6 856 aa18.01■□□□□ 0.47
PDAP1-202ENST00000426447 LOC285556D6RIA3 1793 aa18.01■□□□□ 0.47
PDAP1-202ENST00000426447 CNGA1P29973 690 aa18■□□□□ 0.47
PDAP1-202ENST00000426447 MFSD14CQ5VZR4 134 aa18■□□□□ 0.47
PDAP1-202ENST00000426447 USP17L2Q6R6M4 530 aa18■□□□□ 0.47
PDAP1-202ENST00000426447 PHF6Q8IWS0 365 aaKnown RBP eCLIP18■□□□□ 0.47
PDAP1-202ENST00000426447 FAM161BQ96MY7 647 aa18■□□□□ 0.47
PDAP1-202ENST00000426447 SNRKQ9NRH2 765 aa18■□□□□ 0.47
PDAP1-202ENST00000426447 PRKAG2Q9UGJ0 569 aa18■□□□□ 0.47
PDAP1-202ENST00000426447 HLA-DOAP06340 250 aa17.99■□□□□ 0.47
PDAP1-202ENST00000426447 CT47B1P0C2W7 299 aaPredicted RBP17.99■□□□□ 0.47
PDAP1-202ENST00000426447 CCNA1P78396 465 aa17.99■□□□□ 0.47
PDAP1-202ENST00000426447 MAP2K5Q13163 448 aa17.99■□□□□ 0.47
PDAP1-202ENST00000426447 MTX1Q13505 466 aa17.99■□□□□ 0.47
PDAP1-202ENST00000426447 ATF7IPQ6VMQ6 1270 aa17.99■□□□□ 0.47
PDAP1-202ENST00000426447 EMILIN3Q9NT22 766 aa17.99■□□□□ 0.47
PDAP1-202ENST00000426447 SAP30BPQ9UHR5 308 aaKnown RBP17.99■□□□□ 0.47
PDAP1-202ENST00000426447 ZBTB21Q9ULJ3 1066 aa17.99■□□□□ 0.47
PDAP1-202ENST00000426447 NDUFB9Q9Y6M9 179 aa17.99■□□□□ 0.47
PDAP1-202ENST00000426447 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
PDAP1-202ENST00000426447 POTEB2H3BUK9 544 aa17.98■□□□□ 0.47
PDAP1-202ENST00000426447 PPP4CP60510 307 aa17.98■□□□□ 0.47
PDAP1-202ENST00000426447 ATP2B2Q01814 1243 aa17.98■□□□□ 0.47
PDAP1-202ENST00000426447 ZYXQ15942 572 aaKnown RBP17.98■□□□□ 0.47
PDAP1-202ENST00000426447 SHROOM1Q2M3G4 852 aaPredicted RBP17.98■□□□□ 0.47
PDAP1-202ENST00000426447 CCDC158Q5M9N0 1113 aa17.98■□□□□ 0.47
PDAP1-202ENST00000426447 TTC39AQ5SRH9 613 aa17.98■□□□□ 0.47
PDAP1-202ENST00000426447 FAM109BQ6ICB4 259 aaPredicted RBP17.98■□□□□ 0.47
PDAP1-202ENST00000426447 FEZ1Q99689 392 aa17.98■□□□□ 0.47
PDAP1-202ENST00000426447 DNAJC18Q9H819 358 aa17.98■□□□□ 0.47
PDAP1-202ENST00000426447 FLT1P17948 1338 aa17.98■□□□□ 0.47
PDAP1-202ENST00000426447 A0A0C4DFX4 3053 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 USP17L15C9J2P7 530 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 USP17L13C9JLJ4 530 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 USP17L11C9JVI0 530 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 USP17L18D6R9N7 530 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 USP17L22D6RA61 530 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 USP17L17D6RBQ6 530 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 USP17L19D6RCP7 530 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 USP17L20D6RJB6 530 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 ATN1P54259 1190 aaPredicted RBP17.97■□□□□ 0.47
PDAP1-202ENST00000426447 USP17L24Q0WX57 530 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 METTL16Q86W50 562 aaKnown RBP17.97■□□□□ 0.47
PDAP1-202ENST00000426447 RABGAP1Q9Y3P9 1069 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 IVNS1ABPQ9Y6Y0 642 aa17.97■□□□□ 0.47
PDAP1-202ENST00000426447 PLXNB2O15031 1838 aa17.96■□□□□ 0.47
PDAP1-202ENST00000426447 ATAD5Q96QE3 1844 aa17.96■□□□□ 0.47
PDAP1-202ENST00000426447 MSCO60682 206 aa17.96■□□□□ 0.47
PDAP1-202ENST00000426447 GH2P01242 217 aa17.96■□□□□ 0.47
PDAP1-202ENST00000426447 ZNF697Q5TEC3 545 aa17.96■□□□□ 0.47
PDAP1-202ENST00000426447 GUCD1Q96NT3 240 aa17.96■□□□□ 0.47
PDAP1-202ENST00000426447 DDX20Q9UHI6 824 aaKnown RBP17.96■□□□□ 0.47
PDAP1-202ENST00000426447 SLC15A5A6NIM6 579 aa17.95■□□□□ 0.46
PDAP1-202ENST00000426447 GNAI2P04899 355 aa17.95■□□□□ 0.46
PDAP1-202ENST00000426447 ARHGAP45Q92619 1136 aa17.95■□□□□ 0.46
PDAP1-202ENST00000426447 FLRT1Q9NZU1 646 aa17.95■□□□□ 0.46
PDAP1-202ENST00000426447 PTPREP23469 700 aa17.94■□□□□ 0.46
PDAP1-202ENST00000426447 RAB3GAP1Q15042 981 aa17.94■□□□□ 0.46
PDAP1-202ENST00000426447 POTEEQ6S8J3 1075 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms