RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 USP17L13C9JLJ4 530 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP17L11C9JVI0 530 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP17L18D6R9N7 530 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP17L22D6RA61 530 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP17L17D6RBQ6 530 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP17L19D6RCP7 530 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP17L20D6RJB6 530 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 MSCO60682 206 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 SURF6O75683 361 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 SLURP2P0DP57 97 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 PRKAR2AP13861 404 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 CYP7A1P22680 504 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 MCAMP43121 646 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 USP17L24Q0WX57 530 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 WDR78Q5VTH9 848 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 EDC3Q96F86 508 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 GDF15Q99988 308 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 LBHD1Q9BQE6 289 aaPredicted RBP14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 PAGR1Q9BTK6 254 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 SNRKQ9NRH2 765 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 RABGAP1Q9Y3P9 1069 aa14.97□□□□□ -0.01
HLA-DQB3-203ENST00000425319 ERVK-9P63128 1117 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 ERVK-24P63145 666 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 ATP2B2Q01814 1243 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 MAP3K12Q12852 859 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 TNNI3KQ59H18 835 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 ZKSCAN2Q63HK3 967 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 PI16Q6UXB8 463 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 TDHQ8IZJ6 230 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 CLUAP1Q96AJ1 413 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 ZNF512BQ96KM6 892 aaPredicted RBP14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 SLC5A4Q9NY91 659 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 PALD1Q9ULE6 856 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 FPGT-TNNI3KV9GXZ4 949 aa14.96□□□□□ -0.01
HLA-DQB3-203ENST00000425319 ATP8B2P98198 1209 aa14.95□□□□□ -0.02
HLA-DQB3-203ENST00000425319 GPR142Q7Z601 462 aa14.95□□□□□ -0.02
HLA-DQB3-203ENST00000425319 FTSJ3Q8IY81 847 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB3-203ENST00000425319 DEFB123Q8N688 67 aa14.95□□□□□ -0.02
HLA-DQB3-203ENST00000425319 DIS3LQ8TF46 1054 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB3-203ENST00000425319 TRIB2Q92519 343 aa14.95□□□□□ -0.02
HLA-DQB3-203ENST00000425319 ZBTB21Q9ULJ3 1066 aa14.95□□□□□ -0.02
HLA-DQB3-203ENST00000425319 PNMA6EA0A0J9YXQ4 647 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 IDH1O75874 414 aaKnown RBP14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 GDF11O95390 407 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 SYN1P17600 705 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 CNGA1P29973 690 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 CACNB2Q08289 660 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 RAB3GAP1Q15042 981 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 LRIT3Q3SXY7 679 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 CERKLQ49MI3 558 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 METTL16Q86W50 562 aaKnown RBP14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 ZNF384Q8TF68 577 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 APBA2Q99767 749 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 HOXC10Q9NYD6 342 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 RBPJLQ9UBG7 517 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 SAP30BPQ9UHR5 308 aaKnown RBP14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 SERPINB13Q9UIV8 391 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 MYH13Q9UKX3 1938 aa14.94□□□□□ -0.02
HLA-DQB3-203ENST00000425319 FLT1P17948 1338 aa14.93□□□□□ -0.02
HLA-DQB3-203ENST00000425319 CCER2I3L3R5 266 aa14.93□□□□□ -0.02
HLA-DQB3-203ENST00000425319 TRIM27P14373 513 aa14.93□□□□□ -0.02
HLA-DQB3-203ENST00000425319 ZAP70P43403 619 aa14.93□□□□□ -0.02
HLA-DQB3-203ENST00000425319 MAP2K5Q13163 448 aa14.93□□□□□ -0.02
HLA-DQB3-203ENST00000425319 TTF1Q15361 905 aaPredicted RBP14.93□□□□□ -0.02
HLA-DQB3-203ENST00000425319 MAP3K21Q5TCX8 1036 aa14.93□□□□□ -0.02
HLA-DQB3-203ENST00000425319 LRCH3Q96II8 777 aa14.93□□□□□ -0.02
HLA-DQB3-203ENST00000425319 DBNDD2Q9BQY9 259 aa14.93□□□□□ -0.02
HLA-DQB3-203ENST00000425319 MYH2Q9UKX2 1941 aa14.93□□□□□ -0.02
HLA-DQB3-203ENST00000425319 SLC15A5A6NIM6 579 aa14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 GH2P01242 217 aa14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 CYP2E1P05181 493 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 POLR3DP05423 398 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 MAGEA10P43363 369 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 TRIM32Q13049 653 aa14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 RRP1BQ14684 758 aaKnown RBP14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 ABCB5Q2M3G0 1257 aa14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 Q3C1V9 767 aa14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 HSP90AB4PQ58FF6 505 aa14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 DPP9Q86TI2 863 aa14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 ERC1Q8IUD2 1116 aa14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 ARRDC4Q8NCT1 418 aa14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 ZSWIM8A7E2V4 1837 aa14.92□□□□□ -0.02
HLA-DQB3-203ENST00000425319 STRNO43815 780 aa14.91□□□□□ -0.02
HLA-DQB3-203ENST00000425319 ZYXQ15942 572 aaKnown RBP14.91□□□□□ -0.02
HLA-DQB3-203ENST00000425319 SSH3Q8TE77 659 aa14.91□□□□□ -0.02
HLA-DQB3-203ENST00000425319 SENP6Q9GZR1 1112 aaPredicted RBP14.91□□□□□ -0.02
HLA-DQB3-203ENST00000425319 EMILIN3Q9NT22 766 aa14.91□□□□□ -0.02
HLA-DQB3-203ENST00000425319 DOCK2Q92608 1830 aa14.91□□□□□ -0.02
HLA-DQB3-203ENST00000425319 BCAR3O75815 825 aa14.9□□□□□ -0.02
HLA-DQB3-203ENST00000425319 PTPREP23469 700 aa14.9□□□□□ -0.02
HLA-DQB3-203ENST00000425319 MORN1Q5T089 497 aa14.9□□□□□ -0.02
HLA-DQB3-203ENST00000425319 CATSPERGQ6ZRH7 1159 aa14.9□□□□□ -0.02
HLA-DQB3-203ENST00000425319 AMOTL1Q8IY63 956 aa14.9□□□□□ -0.02
HLA-DQB3-203ENST00000425319 C12orf42Q96LP6 360 aa14.9□□□□□ -0.02
HLA-DQB3-203ENST00000425319 KIAA1683Q9H0B3 1180 aa14.9□□□□□ -0.02
HLA-DQB3-203ENST00000425319 EHD4Q9H223 541 aa14.9□□□□□ -0.02
HLA-DQB3-203ENST00000425319 TXNRD2Q9NNW7 524 aa14.9□□□□□ -0.02
HLA-DQB3-203ENST00000425319 STXBP5LQ9Y2K9 1186 aa14.9□□□□□ -0.02
HLA-DQB3-203ENST00000425319 HTTP42858 3142 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms