RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 PRR33A8MZF0 331 aa9.29□□□□□ -0.92
LINC01040-201ENST00000425048 GLI1P08151 1106 aa9.29□□□□□ -0.92
LINC01040-201ENST00000425048 ZNF746Q6NUN9 644 aaPredicted RBP9.29□□□□□ -0.92
LINC01040-201ENST00000425048 KIRREL1Q96J84 757 aa9.29□□□□□ -0.92
LINC01040-201ENST00000425048 GDNFP39905 211 aa9.28□□□□□ -0.92
LINC01040-201ENST00000425048 NKG7Q16617 165 aa9.28□□□□□ -0.92
LINC01040-201ENST00000425048 TMEM67Q5HYA8 995 aa9.28□□□□□ -0.92
LINC01040-201ENST00000425048 RIN3Q8TB24 985 aa9.28□□□□□ -0.92
LINC01040-201ENST00000425048 TTF2Q9UNY4 1162 aaKnown RBP9.28□□□□□ -0.92
LINC01040-201ENST00000425048 H3BS24 57 aa9.27□□□□□ -0.93
LINC01040-201ENST00000425048 CYP7A1P22680 504 aa9.27□□□□□ -0.93
LINC01040-201ENST00000425048 RAP1GAPP47736 663 aa9.27□□□□□ -0.93
LINC01040-201ENST00000425048 FGD1P98174 961 aa9.27□□□□□ -0.93
LINC01040-201ENST00000425048 KRTAP19-4Q3LI73 84 aa9.27□□□□□ -0.93
LINC01040-201ENST00000425048 TTBK2Q6IQ55 1244 aa9.27□□□□□ -0.93
LINC01040-201ENST00000425048 LETMD1Q6P1Q0 360 aa9.27□□□□□ -0.93
LINC01040-201ENST00000425048 MPZL3Q6UWV2 235 aa9.27□□□□□ -0.93
LINC01040-201ENST00000425048 CCDC120Q96HB5 630 aa9.27□□□□□ -0.93
LINC01040-201ENST00000425048 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.26□□□□□ -0.93
LINC01040-201ENST00000425048 WIPI1Q5MNZ9 446 aaPredicted RBP9.26□□□□□ -0.93
LINC01040-201ENST00000425048 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.26□□□□□ -0.93
LINC01040-201ENST00000425048 SPOCD1Q6ZMY3 1216 aa9.26□□□□□ -0.93
LINC01040-201ENST00000425048 GAL3ST3Q96A11 431 aa9.26□□□□□ -0.93
LINC01040-201ENST00000425048 PPP1R16BQ96T49 567 aa9.26□□□□□ -0.93
LINC01040-201ENST00000425048 ST14Q9Y5Y6 855 aa9.26□□□□□ -0.93
LINC01040-201ENST00000425048 CAPN6Q9Y6Q1 641 aa9.26□□□□□ -0.93
LINC01040-201ENST00000425048 IVNS1ABPQ9Y6Y0 642 aa9.26□□□□□ -0.93
LINC01040-201ENST00000425048 CBX7O95931 251 aa9.25□□□□□ -0.93
LINC01040-201ENST00000425048 CST3P01034 146 aaPredicted RBP9.25□□□□□ -0.93
LINC01040-201ENST00000425048 LDHBP07195 334 aaKnown RBP9.25□□□□□ -0.93
LINC01040-201ENST00000425048 LMNB1P20700 586 aa9.25□□□□□ -0.93
LINC01040-201ENST00000425048 THAP5Q7Z6K1 395 aa9.25□□□□□ -0.93
LINC01040-201ENST00000425048 COX4I2Q96KJ9 171 aa9.25□□□□□ -0.93
LINC01040-201ENST00000425048 GRK4P32298 578 aa9.24□□□□□ -0.93
LINC01040-201ENST00000425048 RPS26P62854 115 aaKnown RBP9.24□□□□□ -0.93
LINC01040-201ENST00000425048 PRR23BQ6ZRT6 265 aa9.24□□□□□ -0.93
LINC01040-201ENST00000425048 UBE2FQ969M7 185 aa9.24□□□□□ -0.93
LINC01040-201ENST00000425048 TOX2Q96NM4 488 aa9.24□□□□□ -0.93
LINC01040-201ENST00000425048 C19orf73Q9NVV2 129 aa9.24□□□□□ -0.93
LINC01040-201ENST00000425048 TACC3Q9Y6A5 838 aa9.24□□□□□ -0.93
LINC01040-201ENST00000425048 EIF4BP23588 611 aaKnown RBP9.23□□□□□ -0.93
LINC01040-201ENST00000425048 KIR3DL1P43629 444 aa9.23□□□□□ -0.93
LINC01040-201ENST00000425048 CDK8P49336 464 aa9.23□□□□□ -0.93
LINC01040-201ENST00000425048 PRAMEF13Q5VWM6 474 aa9.23□□□□□ -0.93
LINC01040-201ENST00000425048 SYDE1Q6ZW31 735 aaPredicted RBP9.23□□□□□ -0.93
LINC01040-201ENST00000425048 XAGE3Q8WTP9 111 aa9.23□□□□□ -0.93
LINC01040-201ENST00000425048 ZSWIM5Q9P217 1185 aa9.23□□□□□ -0.93
LINC01040-201ENST00000425048 GFRA2O00451 464 aa9.22□□□□□ -0.93
LINC01040-201ENST00000425048 TSPAN15O95858 294 aa9.22□□□□□ -0.93
LINC01040-201ENST00000425048 P4HBP07237 508 aaKnown RBP9.22□□□□□ -0.93
LINC01040-201ENST00000425048 CCDC85BQ15834 202 aaPredicted RBP9.22□□□□□ -0.93
LINC01040-201ENST00000425048 ALPK1Q96QP1 1244 aa9.22□□□□□ -0.93
LINC01040-201ENST00000425048 GNA15P30679 374 aa9.21□□□□□ -0.94
LINC01040-201ENST00000425048 KCNA1Q09470 495 aa9.21□□□□□ -0.94
LINC01040-201ENST00000425048 CDH24Q86UP0 819 aa9.21□□□□□ -0.94
LINC01040-201ENST00000425048 ANKLE2Q86XL3 938 aa9.21□□□□□ -0.94
LINC01040-201ENST00000425048 CILP2Q8IUL8 1156 aa9.2□□□□□ -0.94
LINC01040-201ENST00000425048 ZSCAN18Q8TBC5 510 aaPredicted RBP9.2□□□□□ -0.94
LINC01040-201ENST00000425048 PCDHB5Q9Y5E4 795 aa9.2□□□□□ -0.94
LINC01040-201ENST00000425048 CFPP27918 469 aa9.19□□□□□ -0.94
LINC01040-201ENST00000425048 TNK2Q07912 1038 aa9.19□□□□□ -0.94
LINC01040-201ENST00000425048 TTC6Q86TZ1 520 aa9.19□□□□□ -0.94
LINC01040-201ENST00000425048 AK5Q9Y6K8 562 aa9.19□□□□□ -0.94
LINC01040-201ENST00000425048 RAC2P15153 192 aa9.18□□□□□ -0.94
LINC01040-201ENST00000425048 SEPT6Q14141 434 aa9.18□□□□□ -0.94
LINC01040-201ENST00000425048 SLC6A19Q695T7 634 aa9.18□□□□□ -0.94
LINC01040-201ENST00000425048 AGMOQ6ZNB7 445 aa9.18□□□□□ -0.94
LINC01040-201ENST00000425048 TMPRSS7Q7RTY8 843 aa9.18□□□□□ -0.94
LINC01040-201ENST00000425048 MRPL41Q8IXM3 137 aaKnown RBP9.18□□□□□ -0.94
LINC01040-201ENST00000425048 FBXO15Q8NCQ5 510 aaPredicted RBP9.18□□□□□ -0.94
LINC01040-201ENST00000425048 PIWIL2Q8TC59 973 aaKnown RBP9.18□□□□□ -0.94
LINC01040-201ENST00000425048 SLAMF8Q9P0V8 285 aa9.18□□□□□ -0.94
LINC01040-201ENST00000425048 PRPF40AO75400 957 aaKnown RBP9.17□□□□□ -0.94
LINC01040-201ENST00000425048 PGRP06401 933 aa9.17□□□□□ -0.94
LINC01040-201ENST00000425048 LCE4AQ5TA78 99 aa9.17□□□□□ -0.94
LINC01040-201ENST00000425048 ABHD4Q8TB40 342 aa9.17□□□□□ -0.94
LINC01040-201ENST00000425048 DIRC2Q96SL1 478 aa9.17□□□□□ -0.94
LINC01040-201ENST00000425048 MIR1-1HGQ9H1L0 117 aa9.17□□□□□ -0.94
LINC01040-201ENST00000425048 NSUN3Q9H649 340 aaKnown RBP9.17□□□□□ -0.94
LINC01040-201ENST00000425048 TJP2Q9UDY2 1190 aa9.17□□□□□ -0.94
LINC01040-201ENST00000425048 NFIBO00712 420 aa9.16□□□□□ -0.94
LINC01040-201ENST00000425048 ETV3P41162 512 aa9.16□□□□□ -0.94
LINC01040-201ENST00000425048 PDE4BQ07343 736 aa9.16□□□□□ -0.94
LINC01040-201ENST00000425048 TMEM87BQ96K49 555 aa9.16□□□□□ -0.94
LINC01040-201ENST00000425048 C1QTNF9P0C862 333 aa9.15□□□□□ -0.94
LINC01040-201ENST00000425048 LIG3P49916 1009 aa9.15□□□□□ -0.94
LINC01040-201ENST00000425048 SIAH1Q8IUQ4 282 aa9.15□□□□□ -0.94
LINC01040-201ENST00000425048 LRRC56Q8IYG6 542 aaPredicted RBP9.15□□□□□ -0.94
LINC01040-201ENST00000425048 DPH2Q9BQC3 489 aaPredicted RBP9.15□□□□□ -0.94
LINC01040-201ENST00000425048 KRTAP4-9Q9BYQ8 210 aa9.15□□□□□ -0.94
LINC01040-201ENST00000425048 DNAJC25-GNG10A0A024R161 153 aa9.14□□□□□ -0.95
LINC01040-201ENST00000425048 ESR1P03372 595 aa9.14□□□□□ -0.95
LINC01040-201ENST00000425048 TMEM253P0C7T8 217 aa9.14□□□□□ -0.95
LINC01040-201ENST00000425048 MAP3K11Q16584 847 aa9.14□□□□□ -0.95
LINC01040-201ENST00000425048 TSNAXIP1Q2TAA8 658 aa9.14□□□□□ -0.95
LINC01040-201ENST00000425048 MCATQ8IVS2 390 aaKnown RBP9.14□□□□□ -0.95
LINC01040-201ENST00000425048 MYLIPQ8WY64 445 aa9.14□□□□□ -0.95
LINC01040-201ENST00000425048 TMEM59LQ9UK28 342 aa9.14□□□□□ -0.95
LINC01040-201ENST00000425048 CEP131Q9UPN4 1083 aa9.14□□□□□ -0.95
LINC01040-201ENST00000425048 RLBP1P12271 317 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms