RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 SIPA1L1O43166 1804 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 SHTN1A0MZ66 631 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 LIFRP42702 1097 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 WTAPQ15007 396 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 FOXD4L5Q5VV16 416 aaPredicted RBP17.54■□□□□ 0.4
CALD1-206ENST00000424922 C16orf86Q6ZW13 317 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 RAB11FIP4Q86YS3 637 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 FOXD4L4Q8WXT5 416 aaPredicted RBP17.54■□□□□ 0.4
CALD1-206ENST00000424922 MTA3Q9BTC8 594 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 FAM198AQ9UFP1 575 aa17.54■□□□□ 0.4
CALD1-206ENST00000424922 TNKSO95271 1327 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 ZNF541Q9H0D2 1346 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 TSPY2A6NKD2 308 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 GOLGA8BA8MQT2 603 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 STX6O43752 255 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 CDK8P49336 464 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 IQCA1Q86XH1 822 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 ZSCAN10Q96SZ4 725 aaPredicted RBP17.53■□□□□ 0.4
CALD1-206ENST00000424922 NCOA5Q9HCD5 579 aaKnown RBP17.53■□□□□ 0.4
CALD1-206ENST00000424922 SYT1P21579 422 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 RPS12P25398 132 aaKnown RBP17.53■□□□□ 0.4
CALD1-206ENST00000424922 SGMS1Q86VZ5 419 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 ZNF287Q9HBT7 754 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 HPS5Q9UPZ3 1129 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 ATP6V1DQ9Y5K8 247 aa17.53■□□□□ 0.4
CALD1-206ENST00000424922 CLRN2A0PK11 232 aa17.52■□□□□ 0.4
CALD1-206ENST00000424922 CCDC69A6NI79 296 aa17.52■□□□□ 0.4
CALD1-206ENST00000424922 NMT2O60551 498 aa17.52■□□□□ 0.4
CALD1-206ENST00000424922 GJB2P29033 226 aa17.52■□□□□ 0.4
CALD1-206ENST00000424922 GMPSP49915 693 aaPredicted RBP17.52■□□□□ 0.4
CALD1-206ENST00000424922 TFAP4Q01664 338 aa17.52■□□□□ 0.4
CALD1-206ENST00000424922 APOA5Q6Q788 366 aa17.52■□□□□ 0.4
CALD1-206ENST00000424922 ZNF444Q8N0Y2 327 aaPredicted RBP17.52■□□□□ 0.4
CALD1-206ENST00000424922 RASA1P20936 1047 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 SEC23AQ15436 765 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 ENAHQ8N8S7 591 aaPredicted RBP17.51■□□□□ 0.39
CALD1-206ENST00000424922 MTMR14Q8NCE2 650 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 MYOZ2Q9NPC6 264 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 TMOD2Q9NZR1 351 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 ZNF70Q9UC06 446 aaPredicted RBP17.51■□□□□ 0.39
CALD1-206ENST00000424922 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
CALD1-206ENST00000424922 HLA-DOAP06340 250 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 ZSCAN29Q8IWY8 852 aaPredicted RBP17.51■□□□□ 0.39
CALD1-206ENST00000424922 TMTC2Q8N394 836 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 CHAMP1Q96JM3 812 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 MYL10Q9BUA6 226 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 SERPINB13Q9UIV8 391 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 SLC12A7Q9Y666 1083 aa17.51■□□□□ 0.39
CALD1-206ENST00000424922 DDTLA6NHG4 134 aaPredicted RBP17.5■□□□□ 0.39
CALD1-206ENST00000424922 TCP10L2B9ZVM9 353 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 F13A1P00488 732 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 TSPY3P0CV98 308 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 TSPY8P0CW00 308 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 RXRAP19793 462 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 GABPAQ06546 454 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 MICU3Q86XE3 530 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 SYAP1Q96A49 352 aaPredicted RBP17.5■□□□□ 0.39
CALD1-206ENST00000424922 DHX36Q9H2U1 1008 aaKnown RBP17.5■□□□□ 0.39
CALD1-206ENST00000424922 TMEM63CQ9P1W3 806 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 ZBTB43O43298 467 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 JAK2O60674 1132 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 NASPP49321 788 aaPredicted RBP17.5■□□□□ 0.39
CALD1-206ENST00000424922 ZNF280AP59817 542 aaPredicted RBP17.5■□□□□ 0.39
CALD1-206ENST00000424922 NBPF9Q3BBW0 867 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 SPDYE2Q495Y8 402 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 IFIT1BQ5T764 474 aaKnown RBP17.5■□□□□ 0.39
CALD1-206ENST00000424922 RBM26Q5T8P6 1007 aaKnown RBP17.5■□□□□ 0.39
CALD1-206ENST00000424922 SH3BP5LQ7L8J4 393 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 MICALL2Q8IY33 904 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 DPF2Q92785 391 aa17.5■□□□□ 0.39
CALD1-206ENST00000424922 ZBED3Q96IU2 234 aaPredicted RBP17.5■□□□□ 0.39
CALD1-206ENST00000424922 CNOT7Q9UIV1 285 aaKnown RBP17.5■□□□□ 0.39
CALD1-206ENST00000424922 WNT10BO00744 389 aa17.49■□□□□ 0.39
CALD1-206ENST00000424922 ENTPD3O75355 529 aa17.49■□□□□ 0.39
CALD1-206ENST00000424922 CTDNEP1O95476 244 aa17.49■□□□□ 0.39
CALD1-206ENST00000424922 NT5C2P49902 561 aa17.49■□□□□ 0.39
CALD1-206ENST00000424922 METAP2P50579 478 aaKnown RBP eCLIP17.49■□□□□ 0.39
CALD1-206ENST00000424922 CCDC173Q0VFZ6 552 aa17.49■□□□□ 0.39
CALD1-206ENST00000424922 LRSAM1Q6UWE0 723 aa17.49■□□□□ 0.39
CALD1-206ENST00000424922 SYNE3Q6ZMZ3 975 aa17.49■□□□□ 0.39
CALD1-206ENST00000424922 CCDC144CPQ8IYA2 1237 aa17.49■□□□□ 0.39
CALD1-206ENST00000424922 PPP1R9BQ96SB3 815 aa17.49■□□□□ 0.39
CALD1-206ENST00000424922 VEZTQ9HBM0 779 aa17.49■□□□□ 0.39
CALD1-206ENST00000424922 MYO1BO43795 1136 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 EGFRP00533 1210 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 MMP14P50281 582 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 LLPHQ9BRT6 129 aaKnown RBP17.48■□□□□ 0.39
CALD1-206ENST00000424922 IL17RBQ9NRM6 502 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 RNF181Q9P0P0 153 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 RBM27Q9P2N5 1060 aaKnown RBP17.48■□□□□ 0.39
CALD1-206ENST00000424922 MYH6P13533 1939 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 SLURP2P0DP57 97 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 USP48Q86UV5 1035 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 ZNF654Q8IZM8 581 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 NSUN7Q8NE18 718 aaKnown RBP17.48■□□□□ 0.39
CALD1-206ENST00000424922 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 PI4KBQ9UBF8 816 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 SWAP70Q9UH65 585 aa17.48■□□□□ 0.39
CALD1-206ENST00000424922 MTMR6Q9Y217 621 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms