RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 CLCN1P35523 988 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 PHKA1P46020 1223 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 GYG1P46976 350 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 PDE1AP54750 535 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 NR5A1Q13285 461 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 LRRFIP1Q32MZ4 808 aaKnown RBP8.53□□□□□ -1.04
EPHA4-206ENST00000424339 SPTY2D1Q68D10 685 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-206ENST00000424339 USP17L1Q7RTZ2 530 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 TXNRD3Q86VQ6 643 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 ANP32EQ9BTT0 268 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 COL25A1Q9BXS0 654 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-206ENST00000424339 CCDC8Q9H0W5 538 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-206ENST00000424339 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 FAM217BQ9NTX9 383 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-206ENST00000424339 RNF181Q9P0P0 153 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-206ENST00000424339 TIAM2Q8IVF5 1701 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 MAST3O60307 1309 aa8.53□□□□□ -1.04
EPHA4-206ENST00000424339 SNAP23O00161 211 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 KLRK1P26718 216 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 FOXK2Q01167 660 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 RASGRF1Q13972 1273 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 C9orf131Q5VYM1 1079 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 ZNF385CQ66K41 422 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-206ENST00000424339 TTLL5Q6EMB2 1281 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 CIAPIN1Q6FI81 312 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 GPC2Q8N158 579 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 SPATA5Q8NB90 893 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 AGBL3Q8NEM8 1001 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 PRR7Q8TB68 274 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 HAUS7Q99871 368 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 DBNDD1Q9H9R9 158 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 AKAP11Q9UKA4 1901 aa8.52□□□□□ -1.05
EPHA4-206ENST00000424339 VIL1P09327 827 aaKnown RBP8.51□□□□□ -1.05
EPHA4-206ENST00000424339 MCAMP43121 646 aa8.51□□□□□ -1.05
EPHA4-206ENST00000424339 AGERQ15109 404 aa8.51□□□□□ -1.05
EPHA4-206ENST00000424339 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.51□□□□□ -1.05
EPHA4-206ENST00000424339 KANK3Q6NY19 840 aa8.51□□□□□ -1.05
EPHA4-206ENST00000424339 SLC51AQ86UW1 340 aa8.51□□□□□ -1.05
EPHA4-206ENST00000424339 CERS3Q8IU89 383 aa8.51□□□□□ -1.05
EPHA4-206ENST00000424339 PLEKHM2Q8IWE5 1019 aa8.51□□□□□ -1.05
EPHA4-206ENST00000424339 DPF2Q92785 391 aa8.51□□□□□ -1.05
EPHA4-206ENST00000424339 GPR101Q96P66 508 aaPredicted RBP8.51□□□□□ -1.05
EPHA4-206ENST00000424339 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.51□□□□□ -1.05
EPHA4-206ENST00000424339 TLR7Q9NYK1 1049 aaKnown RBP8.51□□□□□ -1.05
EPHA4-206ENST00000424339 SCN9AQ15858 1988 aa8.51□□□□□ -1.05
EPHA4-206ENST00000424339 RFX7Q2KHR2 1363 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 WTIPA6NIX2 430 aaPredicted RBP8.5□□□□□ -1.05
EPHA4-206ENST00000424339 YDJCA8MPS7 323 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 GTF2IP78347 998 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 HDLBPQ00341 1268 aaKnown RBP8.5□□□□□ -1.05
EPHA4-206ENST00000424339 CXCL9Q07325 125 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 MFSD14BQ5SR56 506 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 DACT2Q5SW24 774 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 ZSCAN25Q6NSZ9 544 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
EPHA4-206ENST00000424339 CNTROBQ8N137 903 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 OGFOD1Q8N543 542 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 PI4K2BQ8TCG2 481 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 EVI5LQ96CN4 794 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 MRIQ9BWK5 157 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 HMG20BQ9P0W2 317 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 HDAC9Q9UKV0 1011 aa8.5□□□□□ -1.05
EPHA4-206ENST00000424339 COL4A5P29400 1685 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 GOLGB1Q14789 3259 aaKnown RBP8.49□□□□□ -1.05
EPHA4-206ENST00000424339 MAST2Q6P0Q8 1798 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 IQCA1LA6NCM1 817 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 GLTPD2A6NH11 291 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 HIP1O00291 1037 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 PSMD14O00487 310 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
EPHA4-206ENST00000424339 ZFYP08048 801 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-206ENST00000424339 NR3C2P08235 984 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 PRELPP51888 382 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 GSTO1P78417 241 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 MAP3K12Q12852 859 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 CHAF1AQ13111 956 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-206ENST00000424339 DESI1Q6ICB0 168 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 C16orf71Q8IYS4 520 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-206ENST00000424339 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 BOLA2Q9H3K6 86 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 PAG1Q9NWQ8 432 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 LRP2BPQ9P2M1 347 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 ZNF646O15015 1829 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-206ENST00000424339 DOCK2Q92608 1830 aa8.49□□□□□ -1.05
EPHA4-206ENST00000424339 SCN4AP35499 1836 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 SPDYE5A6NIY4 337 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 EIF5BO60841 1220 aaKnown RBP8.48□□□□□ -1.05
EPHA4-206ENST00000424339 RAD17O75943 681 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 MAP4K4O95819 1239 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-206ENST00000424339 LDHCP07864 332 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 USP17L8P0C7I0 530 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 LMOD1P29536 600 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-206ENST00000424339 GRM5P41594 1212 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 ZAP70P43403 619 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 PTSQ03393 145 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 BMP2KLQ5H9B9 411 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 XP32Q5T750 250 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms