RNA–Protein interactions for RNA: ENST00000423966.5

AFF3-206, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-206ENST00000423966 LIMCH1Q9UPQ0 1083 aa11.2□□□□□ -0.62
AFF3-206ENST00000423966 DDX60LQ5H9U9 1706 aaKnown RBP11.2□□□□□ -0.62
AFF3-206ENST00000423966 COL2A1P02458 1487 aaPredicted RBP11.19□□□□□ -0.62
AFF3-206ENST00000423966 ROBO3Q96MS0 1386 aa11.19□□□□□ -0.62
AFF3-206ENST00000423966 PRC1O43663 620 aa11.19□□□□□ -0.62
AFF3-206ENST00000423966 RRP12Q5JTH9 1297 aaKnown RBP11.19□□□□□ -0.62
AFF3-206ENST00000423966 ZSCAN29Q8IWY8 852 aaPredicted RBP11.19□□□□□ -0.62
AFF3-206ENST00000423966 MB21D2Q8IYB1 491 aaPredicted RBP11.19□□□□□ -0.62
AFF3-206ENST00000423966 TMEM87BQ96K49 555 aa11.19□□□□□ -0.62
AFF3-206ENST00000423966 TTC14Q96N46 770 aa11.19□□□□□ -0.62
AFF3-206ENST00000423966 UBAC1Q9BSL1 405 aa11.19□□□□□ -0.62
AFF3-206ENST00000423966 SH2B1Q9NRF2 756 aaPredicted RBP11.19□□□□□ -0.62
AFF3-206ENST00000423966 SWAP70Q9UH65 585 aa11.19□□□□□ -0.62
AFF3-206ENST00000423966 TAF6LQ9Y6J9 622 aa11.19□□□□□ -0.62
AFF3-206ENST00000423966 CYP2D7A0A087X1C5 515 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 B4E1Z4 1266 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 RANBP6O60518 1105 aaKnown RBP11.18□□□□□ -0.62
AFF3-206ENST00000423966 KDM4AO75164 1064 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 FGRP09769 529 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 CYP2D6P10635 497 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 AK2P54819 239 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 EXOSC10Q01780 885 aaKnown RBP11.18□□□□□ -0.62
AFF3-206ENST00000423966 KIF4BQ2VIQ3 1234 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 PPP4R3BQ5MIZ7 849 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 Q6ZUG5 572 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 FAM83AQ86UY5 434 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 IQCA1Q86XH1 822 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 ZNF444Q8N0Y2 327 aaPredicted RBP11.18□□□□□ -0.62
AFF3-206ENST00000423966 TMTC2Q8N394 836 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 FBXL16Q8N461 479 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 CRACR2BQ8N4Y2 399 aaPredicted RBP11.18□□□□□ -0.62
AFF3-206ENST00000423966 FAM151AQ8WW52 585 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 ZBED3Q96IU2 234 aaPredicted RBP11.18□□□□□ -0.62
AFF3-206ENST00000423966 NBPF3Q9H094 633 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 EHD4Q9H223 541 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 VEZTQ9HBM0 779 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 GPRC5DQ9NZD1 345 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 PI4KBQ9UBF8 816 aa11.18□□□□□ -0.62
AFF3-206ENST00000423966 NEDD4P46934 1319 aa11.17□□□□□ -0.62
AFF3-206ENST00000423966 WNT10BO00744 389 aa11.17□□□□□ -0.62
AFF3-206ENST00000423966 IFIT3O14879 490 aaKnown RBP11.17□□□□□ -0.62
AFF3-206ENST00000423966 CPA1P15085 419 aa11.17□□□□□ -0.62
AFF3-206ENST00000423966 RBM26Q5T8P6 1007 aaKnown RBP11.17□□□□□ -0.62
AFF3-206ENST00000423966 SYNE3Q6ZMZ3 975 aa11.17□□□□□ -0.62
AFF3-206ENST00000423966 C16orf86Q6ZW13 317 aa11.17□□□□□ -0.62
AFF3-206ENST00000423966 APOBEC3FQ8IUX4 373 aaKnown RBP11.17□□□□□ -0.62
AFF3-206ENST00000423966 FOXP4Q8IVH2 680 aaPredicted RBP11.17□□□□□ -0.62
AFF3-206ENST00000423966 STK11IPQ8N1F8 1099 aa11.17□□□□□ -0.62
AFF3-206ENST00000423966 HOOK2Q96ED9 719 aa11.17□□□□□ -0.62
AFF3-206ENST00000423966 DDX4Q9NQI0 724 aaKnown RBP11.17□□□□□ -0.62
AFF3-206ENST00000423966 SERPINB13Q9UIV8 391 aa11.17□□□□□ -0.62
AFF3-206ENST00000423966 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.17□□□□□ -0.62
AFF3-206ENST00000423966 GOLGB1Q14789 3259 aaKnown RBP11.17□□□□□ -0.62
AFF3-206ENST00000423966 CLRN2A0PK11 232 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 TSPY2A6NKD2 308 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 TCP10L2B9ZVM9 353 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 CDK8P49336 464 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 PLCD1P51178 756 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 TCP10Q12799 353 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 NFIAQ12857 509 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 PDAP1Q13442 181 aaKnown RBP11.16□□□□□ -0.62
AFF3-206ENST00000423966 TBC1D10BQ4KMP7 808 aaPredicted RBP11.16□□□□□ -0.62
AFF3-206ENST00000423966 TMEM67Q5HYA8 995 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 NFXL1Q6ZNB6 911 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 NOL8Q76FK4 1167 aaKnown RBP11.16□□□□□ -0.62
AFF3-206ENST00000423966 ADARB2Q9NS39 739 aaKnown RBP11.16□□□□□ -0.62
AFF3-206ENST00000423966 ZSWIM5Q9P217 1185 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 ANGEL1Q9UNK9 670 aaKnown RBP11.16□□□□□ -0.62
AFF3-206ENST00000423966 PCDHAC2Q9Y5I4 1007 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 SCN4AP35499 1836 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 ATRNL1Q5VV63 1379 aa11.16□□□□□ -0.62
AFF3-206ENST00000423966 IQCA1LA6NCM1 817 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 CCDC69A6NI79 296 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 DDNO94850 711 aaPredicted RBP11.15□□□□□ -0.62
AFF3-206ENST00000423966 TSPY3P0CV98 308 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 TSPY8P0CW00 308 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 LIFRP42702 1097 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 CACNB3P54284 484 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 WTAPQ15007 396 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 SLC4A8Q2Y0W8 1093 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 NBPF9Q3BBW0 867 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 SAMD7Q7Z3H4 446 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 BRF1Q92994 677 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 ZNF274Q96GC6 653 aaPredicted RBP11.15□□□□□ -0.62
AFF3-206ENST00000423966 TMX3Q96JJ7 454 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 CCDC17Q96LX7 622 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 TCEANC2Q96MN5 208 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 CSRNP1Q96S65 589 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 AGXT2Q9BYV1 514 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 HERC5Q9UII4 1024 aaKnown RBP11.15□□□□□ -0.62
AFF3-206ENST00000423966 HACL1Q9UJ83 578 aa11.15□□□□□ -0.62
AFF3-206ENST00000423966 NAP1L2Q9ULW6 460 aaPredicted RBP11.15□□□□□ -0.62
AFF3-206ENST00000423966 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.15□□□□□ -0.62
AFF3-206ENST00000423966 GLTPD2A6NH11 291 aa11.14□□□□□ -0.63
AFF3-206ENST00000423966 SH2B2O14492 632 aaPredicted RBP11.14□□□□□ -0.63
AFF3-206ENST00000423966 DHX16O60231 1041 aaKnown RBP11.14□□□□□ -0.63
AFF3-206ENST00000423966 PRDM1O75626 825 aa11.14□□□□□ -0.63
AFF3-206ENST00000423966 CD2BP2O95400 341 aaKnown RBP11.14□□□□□ -0.63
AFF3-206ENST00000423966 ANTXR2P58335 489 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms