RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 TSPYL6Q8N831 410 aa12.34□□□□□ -0.43
TNC-203ENST00000423613 GABPAQ06546 454 aa12.34□□□□□ -0.43
TNC-203ENST00000423613 hCG_2014768A0A024R1R8 64 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 PPP2R5CQ13362 524 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 LONRF3Q496Y0 759 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 HSP90AA5PQ58FG0 334 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.33□□□□□ -0.44
TNC-203ENST00000423613 TSC22D3Q99576 134 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 DCTPP1Q9H773 170 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 DENND4BO75064 1496 aaPredicted RBP12.33□□□□□ -0.44
TNC-203ENST00000423613 PCYT1AP49585 367 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 ITIH3Q06033 890 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 SMC5Q8IY18 1101 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 ANKFY1Q9P2R3 1169 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 SAP30BPQ9UHR5 308 aaKnown RBP12.33□□□□□ -0.44
TNC-203ENST00000423613 GRIN2AQ12879 1464 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 CWF19L2Q2TBE0 894 aaKnown RBP12.33□□□□□ -0.44
TNC-203ENST00000423613 EFCC1Q9HA90 598 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 MKL2Q9ULH7 1088 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 SCINQ9Y6U3 715 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 TFCP2Q12800 502 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 ZBTB41Q5SVQ8 909 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 ANKRD20A3Q5VUR7 823 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 RUFY4Q6ZNE9 571 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 MIGA1Q8NAN2 632 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 ATG3Q9NT62 314 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 RXRAP19793 462 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 LONP1P36776 959 aaKnown RBP12.33□□□□□ -0.44
TNC-203ENST00000423613 SND1Q7KZF4 910 aaKnown RBP eCLIP12.33□□□□□ -0.44
TNC-203ENST00000423613 TEX11Q8IYF3 940 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 PLIN2Q99541 437 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 TRIM6Q9C030 488 aaPredicted RBP12.33□□□□□ -0.44
TNC-203ENST00000423613 MCM9Q9NXL9 1143 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 PPME1Q9Y570 386 aa12.33□□□□□ -0.44
TNC-203ENST00000423613 ZBBXA8MT70 800 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 AKR1B15C9JRZ8 316 aaPredicted RBP12.32□□□□□ -0.44
TNC-203ENST00000423613 ZFXP17010 805 aaPredicted RBP12.32□□□□□ -0.44
TNC-203ENST00000423613 ZYXQ15942 572 aaKnown RBP12.32□□□□□ -0.44
TNC-203ENST00000423613 MSANTD4Q8NCY6 345 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 EIF2AQ9BY44 585 aaKnown RBP12.32□□□□□ -0.44
TNC-203ENST00000423613 RBSNQ9H1K0 784 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.32□□□□□ -0.44
TNC-203ENST00000423613 GAS8O95995 478 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 PPFIA1Q13136 1202 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 KRT24Q2M2I5 525 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 MAGEB6Q8N7X4 407 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 CFAP61Q8NHU2 1237 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 MAK16Q9BXY0 300 aaKnown RBP12.32□□□□□ -0.44
TNC-203ENST00000423613 CAPS2Q9BXY5 557 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 KIF22Q14807 665 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 KRT79Q5XKE5 535 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 ARMC9Q7Z3E5 817 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 PLEKHM2Q8IWE5 1019 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 KLHL7Q8IXQ5 586 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 CEP70Q8NHQ1 597 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 PLCB1Q9NQ66 1216 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 CCT5P48643 541 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 LINS1Q8NG48 757 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 NOP56O00567 594 aaKnown RBP12.32□□□□□ -0.44
TNC-203ENST00000423613 VAMP4O75379 141 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 GFAPP14136 432 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 CALML3P27482 149 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 GRAMD4Q6IC98 578 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 ZNF280CQ8ND82 737 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 SLC4A7Q9Y6M7 1214 aa12.32□□□□□ -0.44
TNC-203ENST00000423613 KDM5BQ9UGL1 1544 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 PPFIA4O75335 1185 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 IL1RL1Q01638 556 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 LRRC59Q96AG4 307 aaKnown RBP12.31□□□□□ -0.44
TNC-203ENST00000423613 WBP4O75554 376 aaKnown RBP12.31□□□□□ -0.44
TNC-203ENST00000423613 TRPA1O75762 1119 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 GNAT2P19087 354 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 CHMLP26374 656 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 HELBQ8NG08 1087 aaPredicted RBP12.31□□□□□ -0.44
TNC-203ENST00000423613 LDHBP07195 334 aaKnown RBP12.31□□□□□ -0.44
TNC-203ENST00000423613 PDE6BP35913 854 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 DHX32Q7L7V1 743 aaKnown RBP12.31□□□□□ -0.44
TNC-203ENST00000423613 SCHIP1Q9P0W5 487 aaPredicted RBP12.31□□□□□ -0.44
TNC-203ENST00000423613 POLKQ9UBT6 870 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 JRKLQ9Y4A0 524 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 M0QZ92 97 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 MAP3K21Q5TCX8 1036 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 PARD3Q8TEW0 1356 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 DYTNA2CJ06 578 aa12.31□□□□□ -0.44
TNC-203ENST00000423613 CCT6AP40227 531 aaKnown RBP12.31□□□□□ -0.44
TNC-203ENST00000423613 ZKSCAN8Q15776 578 aaPredicted RBP12.31□□□□□ -0.44
TNC-203ENST00000423613 NPHP3Q7Z494 1330 aa12.3□□□□□ -0.44
TNC-203ENST00000423613 POLR3AO14802 1390 aaPredicted RBP12.3□□□□□ -0.44
TNC-203ENST00000423613 RNF40O75150 1001 aa12.3□□□□□ -0.44
TNC-203ENST00000423613 TAF11Q15544 211 aa12.3□□□□□ -0.44
TNC-203ENST00000423613 BRAPQ7Z569 592 aa12.3□□□□□ -0.44
TNC-203ENST00000423613 BCAS4Q8TDM0 211 aa12.3□□□□□ -0.44
TNC-203ENST00000423613 SCOCQ9UIL1 159 aa12.3□□□□□ -0.44
TNC-203ENST00000423613 LOC102724159A0A0B4J2E5 919 aa12.3□□□□□ -0.44
TNC-203ENST00000423613 PLCG2P16885 1265 aa12.3□□□□□ -0.44
TNC-203ENST00000423613 EEF1DP29692 281 aaKnown RBP12.3□□□□□ -0.44
TNC-203ENST00000423613 HSPA2P54652 639 aa12.3□□□□□ -0.44
TNC-203ENST00000423613 PWP2Q15269 919 aaKnown RBP12.3□□□□□ -0.44
TNC-203ENST00000423613 BCAP29Q9UHQ4 241 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms