RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 PROCA1Q8NCQ7 364 aaPredicted RBP18.73■□□□□ 0.59
SPC24-201ENST00000423327 CRNKL1Q9BZJ0 848 aaKnown RBP18.73■□□□□ 0.59
SPC24-201ENST00000423327 DCP1AQ9NPI6 582 aaPredicted RBP18.73■□□□□ 0.59
SPC24-201ENST00000423327 SERPINB13Q9UIV8 391 aa18.73■□□□□ 0.59
SPC24-201ENST00000423327 RBBP6Q7Z6E9 1792 aaKnown RBP18.73■□□□□ 0.59
SPC24-201ENST00000423327 SMIM22K7EJ46 135 aa18.72■□□□□ 0.59
SPC24-201ENST00000423327 ASNSP08243 561 aa18.72■□□□□ 0.59
SPC24-201ENST00000423327 CYP2D6P10635 497 aa18.72■□□□□ 0.59
SPC24-201ENST00000423327 SHMT1P34896 483 aa18.72■□□□□ 0.59
SPC24-201ENST00000423327 MTMR2Q13614 643 aa18.72■□□□□ 0.59
SPC24-201ENST00000423327 TRIM47Q96LD4 638 aa18.72■□□□□ 0.59
SPC24-201ENST00000423327 WDR18Q9BV38 432 aa18.72■□□□□ 0.59
SPC24-201ENST00000423327 TBC1D2Q9BYX2 928 aa18.72■□□□□ 0.59
SPC24-201ENST00000423327 SALL3Q9BXA9 1300 aa18.72■□□□□ 0.59
SPC24-201ENST00000423327 GH2P01242 217 aa18.71■□□□□ 0.59
SPC24-201ENST00000423327 UBE3CQ15386 1083 aa18.71■□□□□ 0.59
SPC24-201ENST00000423327 PI4K2BQ8TCG2 481 aa18.71■□□□□ 0.59
SPC24-201ENST00000423327 ARMC5Q96C12 935 aa18.71■□□□□ 0.59
SPC24-201ENST00000423327 TRIM34Q9BYJ4 488 aa18.71■□□□□ 0.59
SPC24-201ENST00000423327 PUS7LQ9H0K6 701 aaKnown RBP18.71■□□□□ 0.59
SPC24-201ENST00000423327 KIAA0100Q14667 2235 aaKnown RBP18.71■□□□□ 0.59
SPC24-201ENST00000423327 TNRC18O15417 2968 aaPredicted RBP18.7■□□□□ 0.58
SPC24-201ENST00000423327 TTC6Q86TZ1 520 aa18.7■□□□□ 0.58
SPC24-201ENST00000423327 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.7■□□□□ 0.58
SPC24-201ENST00000423327 AS3MTQ9HBK9 375 aa18.7■□□□□ 0.58
SPC24-201ENST00000423327 MCM9Q9NXL9 1143 aa18.7■□□□□ 0.58
SPC24-201ENST00000423327 DOCK3Q8IZD9 2030 aa18.69■□□□□ 0.58
SPC24-201ENST00000423327 OSBPP22059 807 aa18.69■□□□□ 0.58
SPC24-201ENST00000423327 GUCY1A2P33402 732 aa18.69■□□□□ 0.58
SPC24-201ENST00000423327 PSMC4P43686 418 aa18.69■□□□□ 0.58
SPC24-201ENST00000423327 BACE1P56817 501 aa18.69■□□□□ 0.58
SPC24-201ENST00000423327 MLLT1Q03111 559 aaPredicted RBP18.69■□□□□ 0.58
SPC24-201ENST00000423327 SLC44A5Q8NCS7 719 aa18.69■□□□□ 0.58
SPC24-201ENST00000423327 GINM1Q9NU53 330 aa18.69■□□□□ 0.58
SPC24-201ENST00000423327 MYH8P13535 1937 aa18.68■□□□□ 0.58
SPC24-201ENST00000423327 POLR3DP05423 398 aaPredicted RBP18.68■□□□□ 0.58
SPC24-201ENST00000423327 KIF22Q14807 665 aa18.68■□□□□ 0.58
SPC24-201ENST00000423327 KBTBD3Q8NAB2 608 aa18.68■□□□□ 0.58
SPC24-201ENST00000423327 ZNF333Q96JL9 665 aa18.68■□□□□ 0.58
SPC24-201ENST00000423327 MKI67P46013 3256 aaKnown RBP18.67■□□□□ 0.58
SPC24-201ENST00000423327 CYP2D7A0A087X1C5 515 aa18.67■□□□□ 0.58
SPC24-201ENST00000423327 POTEFA5A3E0 1075 aa18.67■□□□□ 0.58
SPC24-201ENST00000423327 HDAC1Q13547 482 aaPredicted RBP18.67■□□□□ 0.58
SPC24-201ENST00000423327 SMCR8Q8TEV9 937 aaPredicted RBP18.67■□□□□ 0.58
SPC24-201ENST00000423327 OSBP2Q969R2 916 aa18.67■□□□□ 0.58
SPC24-201ENST00000423327 DYNLL2Q96FJ2 89 aa18.67■□□□□ 0.58
SPC24-201ENST00000423327 ASCC2Q9H1I8 757 aaPredicted RBP18.67■□□□□ 0.58
SPC24-201ENST00000423327 EMILIN3Q9NT22 766 aa18.67■□□□□ 0.58
SPC24-201ENST00000423327 SRRDQ9UH36 339 aa18.67■□□□□ 0.58
SPC24-201ENST00000423327 TTC41PQ6P2S7 1318 aa18.67■□□□□ 0.58
SPC24-201ENST00000423327 USP17L10C9JJH3 530 aa18.66■□□□□ 0.58
SPC24-201ENST00000423327 GNRH1P01148 92 aa18.66■□□□□ 0.58
SPC24-201ENST00000423327 ARHGEF6Q15052 776 aa18.66■□□□□ 0.58
SPC24-201ENST00000423327 CERKLQ49MI3 558 aaPredicted RBP18.66■□□□□ 0.58
SPC24-201ENST00000423327 ANKRD13CQ8N6S4 541 aa18.66■□□□□ 0.58
SPC24-201ENST00000423327 SH3TC2Q8TF17 1288 aa18.66■□□□□ 0.58
SPC24-201ENST00000423327 GPATCH3Q96I76 525 aa18.66■□□□□ 0.58
SPC24-201ENST00000423327 C19orf81C9J6K1 198 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 PEX10O60683 326 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 PRKCZQ05513 592 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 FAM110CQ1W6H9 321 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 ABCB5Q2M3G0 1257 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 ZSCAN25Q6NSZ9 544 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 POTEEQ6S8J3 1075 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 ACER1Q8TDN7 264 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 ATP8A2Q9NTI2 1148 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 PNMA3Q9UL41 463 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 GABRQQ9UN88 632 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 PDE4DIPQ5VU43 2346 aa18.65■□□□□ 0.58
SPC24-201ENST00000423327 FMNL1O95466 1100 aaPredicted RBP18.64■□□□□ 0.57
SPC24-201ENST00000423327 MX1P20591 662 aa18.64■□□□□ 0.57
SPC24-201ENST00000423327 HOXA7P31268 230 aaPredicted RBP18.64■□□□□ 0.57
SPC24-201ENST00000423327 SEPT2Q15019 361 aa18.64■□□□□ 0.57
SPC24-201ENST00000423327 RAB3GAP1Q15042 981 aa18.64■□□□□ 0.57
SPC24-201ENST00000423327 SLC9C1Q4G0N8 1177 aa18.64■□□□□ 0.57
SPC24-201ENST00000423327 EXOC6Q8TAG9 804 aa18.64■□□□□ 0.57
SPC24-201ENST00000423327 C12orf42Q96LP6 360 aa18.64■□□□□ 0.57
SPC24-201ENST00000423327 STRBPQ96SI9 672 aaKnown RBP18.64■□□□□ 0.57
SPC24-201ENST00000423327 SLC4A4Q9Y6R1 1079 aa18.64■□□□□ 0.57
SPC24-201ENST00000423327 PLXNB2O15031 1838 aa18.64■□□□□ 0.57
SPC24-201ENST00000423327 MYPNQ86TC9 1320 aa18.64■□□□□ 0.57
SPC24-201ENST00000423327 GREB1LQ9C091 1923 aaPredicted RBP18.63■□□□□ 0.57
SPC24-201ENST00000423327 USP17L12C9JPN9 530 aa18.63■□□□□ 0.57
SPC24-201ENST00000423327 USP17L21D6R901 530 aa18.63■□□□□ 0.57
SPC24-201ENST00000423327 M0R2C6 588 aa18.63■□□□□ 0.57
SPC24-201ENST00000423327 PRMT2P55345 433 aa18.63■□□□□ 0.57
SPC24-201ENST00000423327 FCGRTP55899 365 aa18.63■□□□□ 0.57
SPC24-201ENST00000423327 ZYXQ15942 572 aaKnown RBP18.63■□□□□ 0.57
SPC24-201ENST00000423327 C12orf60Q5U649 245 aa18.63■□□□□ 0.57
SPC24-201ENST00000423327 CTR9Q6PD62 1173 aa18.63■□□□□ 0.57
SPC24-201ENST00000423327 APPBP2Q92624 585 aa18.63■□□□□ 0.57
SPC24-201ENST00000423327 EPB41L4AQ9HCS5 686 aaPredicted RBP18.63■□□□□ 0.57
SPC24-201ENST00000423327 TXNRD2Q9NNW7 524 aa18.63■□□□□ 0.57
SPC24-201ENST00000423327 TMOD4Q9NZQ9 345 aa18.63■□□□□ 0.57
SPC24-201ENST00000423327 A0A1W2PRG0 241 aa18.62■□□□□ 0.57
SPC24-201ENST00000423327 RNF113AO15541 343 aaKnown RBP18.62■□□□□ 0.57
SPC24-201ENST00000423327 GLRX3O76003 335 aaKnown RBP18.62■□□□□ 0.57
SPC24-201ENST00000423327 PABPC4Q13310 644 aaKnown RBP eCLIP18.62■□□□□ 0.57
SPC24-201ENST00000423327 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
SPC24-201ENST00000423327 CLEC10AQ8IUN9 316 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms