RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ZBTB21Q9ULJ3 1066 aa18.43■□□□□ 0.54
USB1-202ENST00000423271 MYPNQ86TC9 1320 aa18.43■□□□□ 0.54
USB1-202ENST00000423271 ZNF532Q9HCE3 1301 aa18.43■□□□□ 0.54
USB1-202ENST00000423271 EN2P19622 333 aaPredicted RBP18.42■□□□□ 0.54
USB1-202ENST00000423271 FCGRTP55899 365 aa18.42■□□□□ 0.54
USB1-202ENST00000423271 SLFNL1Q499Z3 407 aa18.42■□□□□ 0.54
USB1-202ENST00000423271 SH3D19Q5HYK7 790 aa18.42■□□□□ 0.54
USB1-202ENST00000423271 NBPF11Q86T75 865 aa18.42■□□□□ 0.54
USB1-202ENST00000423271 WDR18Q9BV38 432 aa18.42■□□□□ 0.54
USB1-202ENST00000423271 LRRCC1Q9C099 1032 aa18.42■□□□□ 0.54
USB1-202ENST00000423271 ATP5JP18859 108 aa18.41■□□□□ 0.54
USB1-202ENST00000423271 PRKCZQ05513 592 aa18.41■□□□□ 0.54
USB1-202ENST00000423271 LCORLQ8N3X6 602 aa18.41■□□□□ 0.54
USB1-202ENST00000423271 ANKRD13CQ8N6S4 541 aa18.41■□□□□ 0.54
USB1-202ENST00000423271 PAG1Q9NWQ8 432 aa18.41■□□□□ 0.54
USB1-202ENST00000423271 PNMA3Q9UL41 463 aa18.41■□□□□ 0.54
USB1-202ENST00000423271 CHGBP05060 677 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 HOXD10P28358 340 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 PLCD1P51178 756 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 BACE1P56817 501 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 EVX2Q03828 476 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 RAET1EQ8TD07 263 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 HAUS7Q99871 368 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 TMEM106CQ9BVX2 250 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 EHD4Q9H223 541 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 SERPINB13Q9UIV8 391 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 GABRQQ9UN88 632 aa18.4■□□□□ 0.54
USB1-202ENST00000423271 MYH7P12883 1935 aa18.39■□□□□ 0.53
USB1-202ENST00000423271 DOCK3Q8IZD9 2030 aa18.39■□□□□ 0.53
USB1-202ENST00000423271 GH2P01242 217 aa18.39■□□□□ 0.53
USB1-202ENST00000423271 TATDN1Q6P1N9 297 aa18.39■□□□□ 0.53
USB1-202ENST00000423271 SDR42E1Q8WUS8 393 aa18.39■□□□□ 0.53
USB1-202ENST00000423271 CRNKL1Q9BZJ0 848 aaKnown RBP18.39■□□□□ 0.53
USB1-202ENST00000423271 ASCC2Q9H1I8 757 aaPredicted RBP18.39■□□□□ 0.53
USB1-202ENST00000423271 ARMT1Q9H993 441 aa18.39■□□□□ 0.53
USB1-202ENST00000423271 GINM1Q9NU53 330 aa18.39■□□□□ 0.53
USB1-202ENST00000423271 GRK4P32298 578 aa18.38■□□□□ 0.53
USB1-202ENST00000423271 SHMT1P34896 483 aa18.38■□□□□ 0.53
USB1-202ENST00000423271 ADD2P35612 726 aa18.38■□□□□ 0.53
USB1-202ENST00000423271 PABPC4Q13310 644 aaKnown RBP eCLIP18.38■□□□□ 0.53
USB1-202ENST00000423271 MTFR1Q15390 333 aa18.38■□□□□ 0.53
USB1-202ENST00000423271 FAM110CQ1W6H9 321 aa18.38■□□□□ 0.53
USB1-202ENST00000423271 TTC6Q86TZ1 520 aa18.38■□□□□ 0.53
USB1-202ENST00000423271 TMOD4Q9NZQ9 345 aa18.38■□□□□ 0.53
USB1-202ENST00000423271 USP17L10C9JJH3 530 aa18.37■□□□□ 0.53
USB1-202ENST00000423271 TNPO2O14787 897 aaKnown RBP18.37■□□□□ 0.53
USB1-202ENST00000423271 POLR3DP05423 398 aaPredicted RBP18.37■□□□□ 0.53
USB1-202ENST00000423271 DCTPP1Q9H773 170 aa18.37■□□□□ 0.53
USB1-202ENST00000423271 MCM9Q9NXL9 1143 aa18.37■□□□□ 0.53
USB1-202ENST00000423271 SUPT16HQ9Y5B9 1047 aaKnown RBP18.37■□□□□ 0.53
USB1-202ENST00000423271 PRKAB2O43741 272 aa18.36■□□□□ 0.53
USB1-202ENST00000423271 MBD4O95243 580 aa18.36■□□□□ 0.53
USB1-202ENST00000423271 CYP2D6P10635 497 aa18.36■□□□□ 0.53
USB1-202ENST00000423271 GCLCP48506 637 aaPredicted RBP18.36■□□□□ 0.53
USB1-202ENST00000423271 FLT3LGP49771 235 aa18.36■□□□□ 0.53
USB1-202ENST00000423271 CERKLQ49MI3 558 aaPredicted RBP18.36■□□□□ 0.53
USB1-202ENST00000423271 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
USB1-202ENST00000423271 EMILIN3Q9NT22 766 aa18.36■□□□□ 0.53
USB1-202ENST00000423271 PCDHB15Q9Y5E8 787 aa18.36■□□□□ 0.53
USB1-202ENST00000423271 BAZ2AQ9UIF9 1905 aaKnown RBP18.35■□□□□ 0.53
USB1-202ENST00000423271 C19orf81C9J6K1 198 aa18.35■□□□□ 0.53
USB1-202ENST00000423271 PEX10O60683 326 aa18.35■□□□□ 0.53
USB1-202ENST00000423271 IRX3P78415 501 aaPredicted RBP18.35■□□□□ 0.53
USB1-202ENST00000423271 GABPAQ06546 454 aa18.35■□□□□ 0.53
USB1-202ENST00000423271 RAB3GAP1Q15042 981 aa18.35■□□□□ 0.53
USB1-202ENST00000423271 ZYXQ15942 572 aaKnown RBP18.35■□□□□ 0.53
USB1-202ENST00000423271 ABCB5Q2M3G0 1257 aa18.35■□□□□ 0.53
USB1-202ENST00000423271 PRPF38BQ5VTL8 546 aaKnown RBP18.35■□□□□ 0.53
USB1-202ENST00000423271 TSHZ3Q63HK5 1081 aa18.35■□□□□ 0.53
USB1-202ENST00000423271 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.35■□□□□ 0.53
USB1-202ENST00000423271 ELNP15502 786 aa18.34■□□□□ 0.53
USB1-202ENST00000423271 HOXA7P31268 230 aaPredicted RBP18.34■□□□□ 0.53
USB1-202ENST00000423271 SLC44A5Q8NCS7 719 aa18.34■□□□□ 0.53
USB1-202ENST00000423271 SLAIN1Q8ND83 568 aa18.34■□□□□ 0.53
USB1-202ENST00000423271 CRBNQ96SW2 442 aa18.34■□□□□ 0.53
USB1-202ENST00000423271 P2RX7Q99572 595 aaKnown RBP18.34■□□□□ 0.53
USB1-202ENST00000423271 ECHDC1Q9NTX5 307 aa18.34■□□□□ 0.53
USB1-202ENST00000423271 SMIM22K7EJ46 135 aa18.33■□□□□ 0.52
USB1-202ENST00000423271 ADCY3O60266 1144 aa18.33■□□□□ 0.52
USB1-202ENST00000423271 GUCY1A2P33402 732 aa18.33■□□□□ 0.52
USB1-202ENST00000423271 HERVK_113P62684 666 aa18.33■□□□□ 0.52
USB1-202ENST00000423271 UBE3CQ15386 1083 aa18.33■□□□□ 0.52
USB1-202ENST00000423271 USP17L2Q6R6M4 530 aa18.33■□□□□ 0.52
USB1-202ENST00000423271 ACER1Q8TDN7 264 aa18.33■□□□□ 0.52
USB1-202ENST00000423271 SHISA4Q96DD7 197 aa18.33■□□□□ 0.52
USB1-202ENST00000423271 FEZ1Q99689 392 aa18.33■□□□□ 0.52
USB1-202ENST00000423271 MORF4L1Q9UBU8 362 aa18.33■□□□□ 0.52
USB1-202ENST00000423271 BIN2Q9UBW5 565 aaPredicted RBP18.33■□□□□ 0.52
USB1-202ENST00000423271 CCL5P13501 91 aa18.32■□□□□ 0.52
USB1-202ENST00000423271 COA7Q96BR5 231 aa18.32■□□□□ 0.52
USB1-202ENST00000423271 DYNLL2Q96FJ2 89 aa18.32■□□□□ 0.52
USB1-202ENST00000423271 C12orf42Q96LP6 360 aa18.32■□□□□ 0.52
USB1-202ENST00000423271 TXNRD2Q9NNW7 524 aa18.32■□□□□ 0.52
USB1-202ENST00000423271 TAOK2Q9UL54 1235 aa18.32■□□□□ 0.52
USB1-202ENST00000423271 MYH8P13535 1937 aa18.31■□□□□ 0.52
USB1-202ENST00000423271 PLXNB2O15031 1838 aa18.31■□□□□ 0.52
USB1-202ENST00000423271 CYP2D7A0A087X1C5 515 aa18.31■□□□□ 0.52
USB1-202ENST00000423271 UBXN2AP68543 259 aa18.31■□□□□ 0.52
USB1-202ENST00000423271 IRF5Q13568 498 aa18.31■□□□□ 0.52
USB1-202ENST00000423271 SEPT2Q15019 361 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms