RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 SHROOM1Q2M3G4 852 aaPredicted RBP22.52■■□□□ 1.2
SREBF1-206ENST00000423161 COA7Q96BR5 231 aa22.52■■□□□ 1.2
SREBF1-206ENST00000423161 DDX60LQ5H9U9 1706 aaKnown RBP22.51■■□□□ 1.19
SREBF1-206ENST00000423161 ELNP15502 786 aa22.51■■□□□ 1.19
SREBF1-206ENST00000423161 USP5P45974 858 aa22.51■■□□□ 1.19
SREBF1-206ENST00000423161 GJA8P48165 433 aa22.51■■□□□ 1.19
SREBF1-206ENST00000423161 BACE1P56817 501 aa22.51■■□□□ 1.19
SREBF1-206ENST00000423161 IRF5Q13568 498 aa22.51■■□□□ 1.19
SREBF1-206ENST00000423161 RHPN1Q8TCX5 695 aa22.51■■□□□ 1.19
SREBF1-206ENST00000423161 GINM1Q9NU53 330 aa22.51■■□□□ 1.19
SREBF1-206ENST00000423161 TMOD4Q9NZQ9 345 aa22.51■■□□□ 1.19
SREBF1-206ENST00000423161 TAOK2Q9UL54 1235 aa22.51■■□□□ 1.19
SREBF1-206ENST00000423161 ZBTB21Q9ULJ3 1066 aa22.51■■□□□ 1.19
SREBF1-206ENST00000423161 PLXNB2O15031 1838 aa22.5■■□□□ 1.19
SREBF1-206ENST00000423161 PXYLP1Q8TE99 480 aa22.5■■□□□ 1.19
SREBF1-206ENST00000423161 UNC93B1Q9H1C4 597 aa22.5■■□□□ 1.19
SREBF1-206ENST00000423161 APBB1O00213 710 aa22.49■■□□□ 1.19
SREBF1-206ENST00000423161 INHAP05111 366 aa22.49■■□□□ 1.19
SREBF1-206ENST00000423161 IRX3P78415 501 aaPredicted RBP22.49■■□□□ 1.19
SREBF1-206ENST00000423161 TMED8Q6PL24 325 aaPredicted RBP22.49■■□□□ 1.19
SREBF1-206ENST00000423161 DDX19BQ9UMR2 479 aa22.49■■□□□ 1.19
SREBF1-206ENST00000423161 COG6Q9Y2V7 657 aa22.49■■□□□ 1.19
SREBF1-206ENST00000423161 C19orf81C9J6K1 198 aa22.48■■□□□ 1.19
SREBF1-206ENST00000423161 USP17L10C9JJH3 530 aa22.48■■□□□ 1.19
SREBF1-206ENST00000423161 HMMRO75330 724 aa22.48■■□□□ 1.19
SREBF1-206ENST00000423161 HABP4Q5JVS0 413 aaKnown RBP22.48■■□□□ 1.19
SREBF1-206ENST00000423161 RPAP2Q8IXW5 612 aaPredicted RBP22.48■■□□□ 1.19
SREBF1-206ENST00000423161 KIF1BPQ96EK5 621 aa22.48■■□□□ 1.19
SREBF1-206ENST00000423161 MYH8P13535 1937 aa22.47■■□□□ 1.19
SREBF1-206ENST00000423161 TTF1Q15361 905 aaPredicted RBP22.47■■□□□ 1.19
SREBF1-206ENST00000423161 CLASRPQ8N2M8 674 aaKnown RBP22.47■■□□□ 1.19
SREBF1-206ENST00000423161 U2AF1L4Q8WU68 220 aaKnown RBP22.47■■□□□ 1.19
SREBF1-206ENST00000423161 MYH7P12883 1935 aa22.47■■□□□ 1.19
SREBF1-206ENST00000423161 GH2P01242 217 aa22.46■■□□□ 1.19
SREBF1-206ENST00000423161 HOXA7P31268 230 aaPredicted RBP22.46■■□□□ 1.19
SREBF1-206ENST00000423161 EHD4Q9H223 541 aa22.46■■□□□ 1.19
SREBF1-206ENST00000423161 ZBTB40Q9NUA8 1239 aa22.46■■□□□ 1.19
SREBF1-206ENST00000423161 MORF4L1Q9UBU8 362 aa22.46■■□□□ 1.19
SREBF1-206ENST00000423161 SERPINB13Q9UIV8 391 aa22.46■■□□□ 1.19
SREBF1-206ENST00000423161 TATDN1Q6P1N9 297 aa22.45■■□□□ 1.18
SREBF1-206ENST00000423161 UBE2Q1Q7Z7E8 422 aa22.45■■□□□ 1.18
SREBF1-206ENST00000423161 TTC6Q86TZ1 520 aa22.45■■□□□ 1.18
SREBF1-206ENST00000423161 SIRT2Q8IXJ6 389 aa22.45■■□□□ 1.18
SREBF1-206ENST00000423161 P2RX7Q99572 595 aaKnown RBP22.45■■□□□ 1.18
SREBF1-206ENST00000423161 RIOK1Q9BRS2 568 aaKnown RBP22.45■■□□□ 1.18
SREBF1-206ENST00000423161 BCL11AQ9H165 835 aa22.45■■□□□ 1.18
SREBF1-206ENST00000423161 MAGEB6P1A0A0J9YX57 407 aa22.44■■□□□ 1.18
SREBF1-206ENST00000423161 SGPL1O95470 568 aa22.44■■□□□ 1.18
SREBF1-206ENST00000423161 IFIT2P09913 472 aaKnown RBP22.44■■□□□ 1.18
SREBF1-206ENST00000423161 HERVK_113P62684 666 aa22.44■■□□□ 1.18
SREBF1-206ENST00000423161 DNAJC2Q99543 621 aaKnown RBP22.44■■□□□ 1.18
SREBF1-206ENST00000423161 H0YGN5 161 aa22.43■■□□□ 1.18
SREBF1-206ENST00000423161 FARP2O94887 1054 aaPredicted RBP22.43■■□□□ 1.18
SREBF1-206ENST00000423161 PDE6AP16499 860 aa22.43■■□□□ 1.18
SREBF1-206ENST00000423161 SLC9C2Q5TAH2 1124 aa22.43■■□□□ 1.18
SREBF1-206ENST00000423161 USP17L2Q6R6M4 530 aa22.43■■□□□ 1.18
SREBF1-206ENST00000423161 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.43■■□□□ 1.18
SREBF1-206ENST00000423161 DPF3Q92784 378 aa22.43■■□□□ 1.18
SREBF1-206ENST00000423161 HTATIP2Q9BUP3 242 aa22.43■■□□□ 1.18
SREBF1-206ENST00000423161 PCDH10Q9P2E7 1040 aa22.43■■□□□ 1.18
SREBF1-206ENST00000423161 RCAN3Q9UKA8 241 aa22.43■■□□□ 1.18
SREBF1-206ENST00000423161 BAZ2AQ9UIF9 1905 aaKnown RBP22.42■■□□□ 1.18
SREBF1-206ENST00000423161 GOLIM4O00461 696 aa22.42■■□□□ 1.18
SREBF1-206ENST00000423161 RAB11FIP3O75154 756 aa22.42■■□□□ 1.18
SREBF1-206ENST00000423161 DEFB118Q96PH6 123 aa22.42■■□□□ 1.18
SREBF1-206ENST00000423161 FEZ1Q99689 392 aa22.42■■□□□ 1.18
SREBF1-206ENST00000423161 CRNKL1Q9BZJ0 848 aaKnown RBP22.42■■□□□ 1.18
SREBF1-206ENST00000423161 CHMP4BQ9H444 224 aaKnown RBP22.42■■□□□ 1.18
SREBF1-206ENST00000423161 TXNRD2Q9NNW7 524 aa22.42■■□□□ 1.18
SREBF1-206ENST00000423161 PAK6Q9NQU5 681 aaPredicted RBP22.42■■□□□ 1.18
SREBF1-206ENST00000423161 EMILIN3Q9NT22 766 aa22.42■■□□□ 1.18
SREBF1-206ENST00000423161 GJD2Q9UKL4 321 aa22.42■■□□□ 1.18
SREBF1-206ENST00000423161 ZNF532Q9HCE3 1301 aa22.41■■□□□ 1.18
SREBF1-206ENST00000423161 PEX10O60683 326 aa22.41■■□□□ 1.18
SREBF1-206ENST00000423161 HMGCRP04035 888 aa22.41■■□□□ 1.18
SREBF1-206ENST00000423161 ZYXQ15942 572 aaKnown RBP22.41■■□□□ 1.18
SREBF1-206ENST00000423161 CERKLQ49MI3 558 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-206ENST00000423161 GPRC5AQ8NFJ5 357 aa22.41■■□□□ 1.18
SREBF1-206ENST00000423161 COLQQ9Y215 455 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-206ENST00000423161 TRIOBPQ9H2D6 2365 aa22.4■■□□□ 1.18
SREBF1-206ENST00000423161 ALPK3Q96L96 1907 aa22.4■■□□□ 1.18
SREBF1-206ENST00000423161 TFRCP02786 760 aaKnown RBP22.4■■□□□ 1.18
SREBF1-206ENST00000423161 POLR3DP05423 398 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-206ENST00000423161 PLCD1P51178 756 aa22.4■■□□□ 1.18
SREBF1-206ENST00000423161 RAB3GAP1Q15042 981 aa22.4■■□□□ 1.18
SREBF1-206ENST00000423161 ABCB5Q2M3G0 1257 aa22.4■■□□□ 1.18
SREBF1-206ENST00000423161 GTF3C2Q8WUA4 911 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-206ENST00000423161 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.4■■□□□ 1.181e-9■■■■□ 21.1
SREBF1-206ENST00000423161 CAPN2P17655 700 aa22.39■■□□□ 1.17
SREBF1-206ENST00000423161 SHMT1P34896 483 aa22.39■■□□□ 1.17
SREBF1-206ENST00000423161 EDC3Q96F86 508 aaKnown RBP22.39■■□□□ 1.17
SREBF1-206ENST00000423161 C12orf42Q96LP6 360 aa22.39■■□□□ 1.17
SREBF1-206ENST00000423161 PAGR1Q9BTK6 254 aa22.39■■□□□ 1.17
SREBF1-206ENST00000423161 CABP5Q9NP86 173 aa22.39■■□□□ 1.17
SREBF1-206ENST00000423161 RBPJLQ9UBG7 517 aa22.39■■□□□ 1.17
SREBF1-206ENST00000423161 TCRBV5S4A2TA0A5A2 114 aa22.38■■□□□ 1.17
SREBF1-206ENST00000423161 USP14P54578 494 aa22.38■■□□□ 1.17
SREBF1-206ENST00000423161 ERVK-9P63128 1117 aa22.38■■□□□ 1.17
SREBF1-206ENST00000423161 ERVK-24P63145 666 aa22.38■■□□□ 1.17
SREBF1-206ENST00000423161 MCM9Q9NXL9 1143 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms