RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 LRRC26Q2I0M4 334 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 METTL24Q5JXM2 366 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 MAFAQ8NHW3 353 aaPredicted RBP9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SUCLG2Q96I99 432 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 CDX2Q99626 313 aaPredicted RBP9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 C9orf78Q9NZ63 289 aaPredicted RBP9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 GJD2Q9UKL4 321 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 OGDHLQ9ULD0 1010 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 DAGLAQ9Y4D2 1042 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 RPAP1Q9BWH6 1393 aaPredicted RBP9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 GRM8O00222 908 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 FOXK1P85037 733 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 ZNF697Q5TEC3 545 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PLPP6Q8IY26 295 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SCYL3Q8IZE3 742 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 KLHDC4Q8TBB5 520 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 MYLIPQ8WY64 445 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 TRIB2Q92519 343 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 KAZALD1Q96I82 304 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 LRRFIP2Q9Y608 721 aaKnown RBP9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 MROH5Q6ZUA9 1318 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 LOC285556D6RIA3 1793 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 MAST2Q6P0Q8 1798 aa9.44□□□□□ -0.9
HLA-DQA1-204ENST00000422863 MAST3O60307 1309 aa9.43□□□□□ -0.9
HLA-DQA1-204ENST00000422863 ZEB1P37275 1124 aaPredicted RBP9.43□□□□□ -0.9
HLA-DQA1-204ENST00000422863 RGS3P49796 1198 aa9.43□□□□□ -0.9
HLA-DQA1-204ENST00000422863 FAM109BQ6ICB4 259 aaPredicted RBP9.43□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SLC4A10Q6U841 1118 aa9.43□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SH3BP5LQ7L8J4 393 aa9.43□□□□□ -0.9
HLA-DQA1-204ENST00000422863 ZSCAN29Q8IWY8 852 aaPredicted RBP9.43□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SEMA6BQ9H3T3 888 aa9.43□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SMCHD1A6NHR9 2005 aa9.43□□□□□ -0.9
HLA-DQA1-204ENST00000422863 RLFQ13129 1914 aa9.43□□□□□ -0.9
HLA-DQA1-204ENST00000422863 DDTLA6NHG4 134 aaPredicted RBP9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 VAMP4O75379 141 aa9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PDE8BO95263 885 aa9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PRDX5P30044 214 aa9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 CCND3P30281 292 aaPredicted RBP9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 FAM110CQ1W6H9 321 aa9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 ZNF787Q6DD87 383 aa9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 ZNF454Q8N9F8 522 aa9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 ZNF775Q96BV0 537 aaPredicted RBP9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 LBHD1Q9BQE6 289 aaPredicted RBP9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 AGTPBP1Q9UPW5 1226 aa9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SLC45A1Q9Y2W3 748 aa9.42□□□□□ -0.9
HLA-DQA1-204ENST00000422863 ZNFX1Q9P2E3 1918 aaKnown RBP9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 FAM196BA6NMK8 535 aa9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 NBPF7P0C2Y1 421 aaPredicted RBP9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 COL6A1P12109 1028 aa9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PTPREP23469 700 aa9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 CACNB2Q08289 660 aaPredicted RBP9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SPP2Q13103 211 aa9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PICALMQ13492 652 aa9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SHHQ15465 462 aa9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 CCL14Q16627 93 aa9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 VGLL2Q8N8G2 317 aa9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SENP6Q9GZR1 1112 aaPredicted RBP9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 BICC1Q9H694 974 aaKnown RBP9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SUGT1Q9Y2Z0 365 aa9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PLXNA1Q9UIW2 1896 aa9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 ATRNL1Q5VV63 1379 aa9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 CTNND1O60716 968 aaKnown RBP9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 HMGCS2P54868 508 aa9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 KCNC4Q03721 635 aa9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 C9orf50Q5SZB4 431 aa9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 WDR66Q8TBY9 1149 aa9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 ASCC2Q9H1I8 757 aaPredicted RBP9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 TTYH1Q9H313 450 aaPredicted RBP9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 DDX4Q9NQI0 724 aaKnown RBP9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PNMA3Q9UL41 463 aa9.4□□□□□ -0.9
HLA-DQA1-204ENST00000422863 COL2A1P02458 1487 aaPredicted RBP9.4□□□□□ -0.91
HLA-DQA1-204ENST00000422863 LDHBP07195 334 aaKnown RBP9.39□□□□□ -0.91
HLA-DQA1-204ENST00000422863 FGFR2P21802 821 aa9.39□□□□□ -0.91
HLA-DQA1-204ENST00000422863 GCLCP48506 637 aaPredicted RBP9.39□□□□□ -0.91
HLA-DQA1-204ENST00000422863 EXOSC9Q06265 439 aaKnown RBP9.39□□□□□ -0.91
HLA-DQA1-204ENST00000422863 MAP3K21Q5TCX8 1036 aa9.39□□□□□ -0.91
HLA-DQA1-204ENST00000422863 WWC1Q8IX03 1113 aa9.39□□□□□ -0.91
HLA-DQA1-204ENST00000422863 SYMPKQ92797 1274 aaKnown RBP9.39□□□□□ -0.91
HLA-DQA1-204ENST00000422863 P2RX7Q99572 595 aaKnown RBP9.39□□□□□ -0.91
HLA-DQA1-204ENST00000422863 NUDT12Q9BQG2 462 aa9.39□□□□□ -0.91
HLA-DQA1-204ENST00000422863 NCOR1O75376 2440 aa9.39□□□□□ -0.91
HLA-DQA1-204ENST00000422863 MYO5AQ9Y4I1 1855 aaKnown RBP9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 TNFRSF10AO00220 468 aa9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 NRG2O14511 850 aaPredicted RBP9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 FOSL2P15408 326 aa9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 MAP3K10Q02779 954 aa9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 RRP1BQ14684 758 aaKnown RBP9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PUM3Q15397 648 aaKnown RBP9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 Q3C1V9 767 aa9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ANKRD44Q8N8A2 993 aa9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 USP38Q8NB14 1042 aa9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 SRCIN1Q9C0H9 1055 aa9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 NDUFB9Q9Y6M9 179 aa9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 BDP1A6H8Y1 2624 aa9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 REV3LO60673 3130 aa9.38□□□□□ -0.91
HLA-DQA1-204ENST00000422863 FANCIQ9NVI1 1328 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms