RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 USP17L21D6R901 530 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 GH2P01242 217 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 ASNSP08243 561 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 PDE4AP27815 886 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 MAP3K10Q02779 954 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 EVX2Q03828 476 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 SPP2Q13103 211 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 RRP1BQ14684 758 aaKnown RBP11.58□□□□□ -0.56
HERC3-204ENST00000422770 ABCB5Q2M3G0 1257 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 SHROOM1Q2M3G4 852 aaPredicted RBP11.58□□□□□ -0.56
HERC3-204ENST00000422770 CERKLQ49MI3 558 aaPredicted RBP11.58□□□□□ -0.56
HERC3-204ENST00000422770 CCDC129Q6ZRS4 1044 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 FAM43AQ8N2R8 423 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 DYNLL2Q96FJ2 89 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 STRBPQ96SI9 672 aaKnown RBP11.58□□□□□ -0.56
HERC3-204ENST00000422770 FEZ1Q99689 392 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 PTPN18Q99952 460 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 EHD4Q9H223 541 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 ZFYVE28Q9HCC9 887 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 CABP5Q9NP86 173 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 ZBTB21Q9ULJ3 1066 aa11.58□□□□□ -0.56
HERC3-204ENST00000422770 GPR25O00155 361 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 PDHXO00330 501 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 CXCL11O14625 94 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 GNAT2P19087 354 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 HMGCS2P54868 508 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 DGKZQ13574 1117 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 MTMR2Q13614 643 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 ZYXQ15942 572 aaKnown RBP11.57□□□□□ -0.56
HERC3-204ENST00000422770 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 SLC44A5Q8NCS7 719 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 ZNF280CQ8ND82 737 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 ZNF296Q8WUU4 475 aaPredicted RBP11.57□□□□□ -0.56
HERC3-204ENST00000422770 NACAP1Q9BZK3 213 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 R3HDMLQ9H3Y0 253 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 DIAPH3Q9NSV4 1193 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 ARPP21Q9UBL0 812 aaPredicted RBP11.57□□□□□ -0.56
HERC3-204ENST00000422770 KCNH4Q9UQ05 1017 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 AFG3L2Q9Y4W6 797 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 ZSWIM8A7E2V4 1837 aa11.57□□□□□ -0.56
HERC3-204ENST00000422770 TESPA1A2RU30 521 aaPredicted RBP11.56□□□□□ -0.56
HERC3-204ENST00000422770 FKTNO75072 461 aa11.56□□□□□ -0.56
HERC3-204ENST00000422770 SHMT1P34896 483 aa11.56□□□□□ -0.56
HERC3-204ENST00000422770 NMIQ13287 307 aaPredicted RBP11.56□□□□□ -0.56
HERC3-204ENST00000422770 CTR9Q6PD62 1173 aa11.56□□□□□ -0.56
HERC3-204ENST00000422770 FASTKD5Q7L8L6 764 aaKnown RBP11.56□□□□□ -0.56
HERC3-204ENST00000422770 FAM227BQ96M60 508 aa11.56□□□□□ -0.56
HERC3-204ENST00000422770 NAPBQ9H115 298 aa11.56□□□□□ -0.56
HERC3-204ENST00000422770 TMOD4Q9NZQ9 345 aa11.56□□□□□ -0.56
HERC3-204ENST00000422770 SWAP70Q9UH65 585 aa11.56□□□□□ -0.56
HERC3-204ENST00000422770 MYH4Q9Y623 1939 aa11.56□□□□□ -0.56
HERC3-204ENST00000422770 MGAMO43451 1857 aa11.55□□□□□ -0.56
HERC3-204ENST00000422770 A0A0D9SFI3 127 aa11.55□□□□□ -0.56
HERC3-204ENST00000422770 A0A0G2JLL6 359 aaPredicted RBP11.55□□□□□ -0.56
HERC3-204ENST00000422770 GSG1L2A8MUP6 293 aa11.55□□□□□ -0.56
HERC3-204ENST00000422770 SMIM22K7EJ46 135 aa11.55□□□□□ -0.56
HERC3-204ENST00000422770 JAG1P78504 1218 aa11.55□□□□□ -0.56
HERC3-204ENST00000422770 ATP2B2Q01814 1243 aa11.55□□□□□ -0.56
HERC3-204ENST00000422770 C12orf60Q5U649 245 aa11.55□□□□□ -0.56
HERC3-204ENST00000422770 PRRT2Q7Z6L0 340 aaPredicted RBP11.55□□□□□ -0.56
HERC3-204ENST00000422770 ANKRD23Q86SG2 305 aa11.55□□□□□ -0.56
HERC3-204ENST00000422770 SMCR8Q8TEV9 937 aaPredicted RBP11.55□□□□□ -0.56
HERC3-204ENST00000422770 TBC1D2Q9BYX2 928 aa11.55□□□□□ -0.56
HERC3-204ENST00000422770 EPB41L4AQ9HCS5 686 aaPredicted RBP11.55□□□□□ -0.56
HERC3-204ENST00000422770 PATL2C9JE40 543 aaKnown RBP11.54□□□□□ -0.56
HERC3-204ENST00000422770 RAD21O60216 631 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 CDK8P49336 464 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 SEPT2Q15019 361 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 TTC22Q5TAA0 569 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 TATDN1Q6P1N9 297 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 CWC27Q6UX04 472 aaKnown RBP11.54□□□□□ -0.56
HERC3-204ENST00000422770 METTL16Q86W50 562 aaKnown RBP11.54□□□□□ -0.56
HERC3-204ENST00000422770 IFNL3Q8IZI9 196 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 CD99L2Q8TCZ2 262 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 PARK7Q99497 189 aaKnown RBP11.54□□□□□ -0.56
HERC3-204ENST00000422770 OSBPL3Q9H4L5 887 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 MKNK2Q9HBH9 465 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 HELLSQ9NRZ9 838 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 GINM1Q9NU53 330 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 CPA4Q9UI42 421 aa11.54□□□□□ -0.56
HERC3-204ENST00000422770 USP17L10C9JJH3 530 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 SLC3A2P08195 630 aaKnown RBP11.53□□□□□ -0.56
HERC3-204ENST00000422770 CYP2C8P10632 490 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 SDSP20132 328 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 MFAP1P55081 439 aaKnown RBP11.53□□□□□ -0.56
HERC3-204ENST00000422770 IRX3P78415 501 aaPredicted RBP11.53□□□□□ -0.56
HERC3-204ENST00000422770 SP3Q02447 781 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 GABPAQ06546 454 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.56
HERC3-204ENST00000422770 KIF22Q14807 665 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 MCMDC2Q4G0Z9 681 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 TREML2Q5T2D2 321 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 GIMAP6Q6P9H5 292 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 C16orf86Q6ZW13 317 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 CTU1Q7Z7A3 348 aaKnown RBP11.53□□□□□ -0.56
HERC3-204ENST00000422770 CLEC10AQ8IUN9 316 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 PROCA1Q8NCQ7 364 aaPredicted RBP11.53□□□□□ -0.56
HERC3-204ENST00000422770 ERO1AQ96HE7 468 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 MCOLN1Q9GZU1 580 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 ZCCHC17Q9NP64 241 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms