RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 CSGALNACT2Q8N6G5 542 aa11.94□□□□□ -0.5
SEMA4D-208ENST00000422704 RRP36Q96EU6 259 aaKnown RBP11.94□□□□□ -0.5
SEMA4D-208ENST00000422704 RTCBQ9Y3I0 505 aaKnown RBP11.94□□□□□ -0.5
SEMA4D-208ENST00000422704 ABCC4O15439 1325 aa11.94□□□□□ -0.5
SEMA4D-208ENST00000422704 CEP57Q86XR8 500 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 MAPKAPK5Q8IW41 473 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 NELFCDQ8IXH7 590 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 SSH2Q76I76 1423 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 GRM1Q13255 1194 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 OGFOD1Q8N543 542 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 EHBP1Q8NDI1 1231 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 ERMNQ8TAM6 284 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 TAOK3Q9H2K8 898 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 NLRC4Q9NPP4 1024 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 ZNF215Q9UL58 517 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 USP17L21D6R901 530 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 FGAP02671 866 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 UTP14CQ5TAP6 766 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 SERTAD1Q9UHV2 236 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 USP31Q70CQ4 1352 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 KRT83P78385 493 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 PYM1Q9BRP8 204 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 PYCARDQ9ULZ3 195 aa11.93□□□□□ -0.5
SEMA4D-208ENST00000422704 CHD2O14647 1828 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 CCNT1O60563 726 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 GYG1P46976 350 aa11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 ZNF589Q86UQ0 364 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 SELENOSQ9BQE4 189 aa11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 ANTXR1Q9H6X2 564 aa11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 FAM207AQ9NSI2 230 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 A0A1W2PRG0 241 aa11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 GCOM1H8Y6P7 765 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 MYZAPP0CAP1 466 aa11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 CKAP4Q07065 602 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 SYNCQ9H7C4 482 aa11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 HOMER2Q9NSB8 354 aa11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 HSPD1P10809 573 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 ST5P78524 1137 aa11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 RDH13Q8NBN7 331 aa11.92□□□□□ -0.5
SEMA4D-208ENST00000422704 DEXIO95424 95 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 GNAT2P19087 354 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 GNA11P29992 359 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 HIBADHP31937 336 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 PUM3Q15397 648 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 HS2ST1Q7LGA3 356 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 MYRIPQ8NFW9 859 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 GJB4Q9NTQ9 266 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 CALRP27797 417 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 ADORA1P30542 326 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 BCAMP50895 628 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 GSTO1P78417 241 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 TTC38Q5R3I4 469 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 ANKRD13CQ8N6S4 541 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 DBNLQ9UJU6 430 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 UFL1O94874 794 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 LARGE1O95461 756 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 GOLGA8HP0CJ92 632 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 PFKFB1P16118 471 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 CDC25AP30304 524 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 TFAP4Q01664 338 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 PAXIP1Q6ZW49 1069 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 TBC1D5Q92609 795 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 ERO1AQ96HE7 468 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 FANCLQ9NW38 375 aa11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 SETD1BQ9UPS6 1966 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-208ENST00000422704 SNAP23O00161 211 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 FAM13AO94988 1023 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 DESP17661 470 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 VAV2P52735 878 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 HERC4Q5GLZ8 1057 aaPredicted RBP11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 CPXCR1Q8N123 301 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 CYP21A2P08686 494 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 ATP5JP18859 108 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 FBF1Q8TES7 1133 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 KIAA1468Q9P260 1216 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 GINS2Q9Y248 185 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 DDX39AO00148 427 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 PARP1P09874 1014 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 POSTNQ15063 836 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 STXBP4Q6ZWJ1 553 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 CCDC50Q8IVM0 306 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 TMEM87BQ96K49 555 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 SBNO1A3KN83 1393 aa11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 NPHP4O75161 1426 aaPredicted RBP11.9□□□□□ -0.5
SEMA4D-208ENST00000422704 EBAG9O00559 213 aa11.9□□□□□ -0.51
SEMA4D-208ENST00000422704 NDUFA8P51970 172 aa11.9□□□□□ -0.51
SEMA4D-208ENST00000422704 FAM182BQ5T319 152 aa11.9□□□□□ -0.51
SEMA4D-208ENST00000422704 GSTA5Q7RTV2 222 aa11.9□□□□□ -0.51
SEMA4D-208ENST00000422704 ZNF804AQ7Z570 1209 aa11.9□□□□□ -0.51
SEMA4D-208ENST00000422704 PCDHA7Q9UN72 937 aa11.9□□□□□ -0.51
SEMA4D-208ENST00000422704 ACTN2P35609 894 aa11.89□□□□□ -0.51
SEMA4D-208ENST00000422704 USH1GQ495M9 461 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms