RNA–Protein interactions for RNA: ENST00000422465.6

RPS3-202, Transcript of ribosomal protein S3, humanhuman

TSL 2

Gene RPS3, Length 903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-202ENST00000422465 CLCN1P35523 988 aa12.2□□□□□ -0.46
RPS3-202ENST00000422465 ALX1Q15699 326 aa12.2□□□□□ -0.46
RPS3-202ENST00000422465 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
RPS3-202ENST00000422465 FAM184AQ8NB25 1140 aa12.2□□□□□ -0.46
RPS3-202ENST00000422465 TRIM44Q96DX7 344 aaPredicted RBP12.2□□□□□ -0.46
RPS3-202ENST00000422465 ZSCAN16Q9H4T2 348 aaPredicted RBP12.2□□□□□ -0.46
RPS3-202ENST00000422465 ZNF652Q9Y2D9 606 aa12.2□□□□□ -0.46
RPS3-202ENST00000422465 KIF3AQ9Y496 699 aa12.2□□□□□ -0.46
RPS3-202ENST00000422465 DOCK2Q92608 1830 aa12.2□□□□□ -0.46
RPS3-202ENST00000422465 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 ZMYM6O95789 1325 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 ESPNB1AK53 854 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 FZD9O00144 591 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 NPR1P16066 1061 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 PDE6AP16499 860 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 LMOD1P29536 600 aaPredicted RBP12.19□□□□□ -0.46
RPS3-202ENST00000422465 FERMT3Q86UX7 667 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 NCOA7Q8NI08 942 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 C7orf43Q8WVR3 580 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 MPHOSPH8Q99549 860 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 FUCA2Q9BTY2 467 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 MCOLN1Q9GZU1 580 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 SEC31BQ9NQW1 1179 aa12.19□□□□□ -0.46
RPS3-202ENST00000422465 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.469e-40■■■■□ 25.2
RPS3-202ENST00000422465 ZNF532Q9HCE3 1301 aa12.18□□□□□ -0.46
RPS3-202ENST00000422465 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
RPS3-202ENST00000422465 ZNF213O14771 459 aa12.18□□□□□ -0.46
RPS3-202ENST00000422465 MCM5P33992 734 aa12.18□□□□□ -0.46
RPS3-202ENST00000422465 IGHMBP2P38935 993 aaKnown RBP12.18□□□□□ -0.46
RPS3-202ENST00000422465 SLC9C2Q5TAH2 1124 aa12.18□□□□□ -0.46
RPS3-202ENST00000422465 PACS2Q86VP3 889 aa12.18□□□□□ -0.46
RPS3-202ENST00000422465 SPATA5Q8NB90 893 aa12.18□□□□□ -0.46
RPS3-202ENST00000422465 RGS22Q8NE09 1264 aa12.18□□□□□ -0.46
RPS3-202ENST00000422465 LEO1Q8WVC0 666 aaPredicted RBP12.18□□□□□ -0.46
RPS3-202ENST00000422465 JDP2Q8WYK2 163 aa12.18□□□□□ -0.46
RPS3-202ENST00000422465 ZNF277Q9NRM2 450 aaPredicted RBP12.18□□□□□ -0.46
RPS3-202ENST00000422465 TLL2Q9Y6L7 1015 aa12.18□□□□□ -0.46
RPS3-202ENST00000422465 H3BQV1 296 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 PRC1O43663 620 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 IARSP41252 1262 aaKnown RBP12.17□□□□□ -0.46
RPS3-202ENST00000422465 EIF6P56537 245 aaKnown RBP12.17□□□□□ -0.46
RPS3-202ENST00000422465 ANTXR2P58335 489 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 HAND2P61296 217 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
RPS3-202ENST00000422465 ATL3Q6DD88 541 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 CYP4F22Q6NT55 531 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 SPNS2Q8IVW8 549 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 CCDC24Q8N4L8 307 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
RPS3-202ENST00000422465 DDX11Q96FC9 970 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 HHIPL1Q96JK4 782 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 STRBPQ96SI9 672 aaKnown RBP12.17□□□□□ -0.46
RPS3-202ENST00000422465 CDC5LQ99459 802 aaKnown RBP12.17□□□□□ -0.46
RPS3-202ENST00000422465 NBPF3Q9H094 633 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 MYH15Q9Y2K3 1946 aa12.17□□□□□ -0.46
RPS3-202ENST00000422465 MYO5AQ9Y4I1 1855 aaKnown RBP12.17□□□□□ -0.46
RPS3-202ENST00000422465 ZMYND10O75800 440 aa12.16□□□□□ -0.46
RPS3-202ENST00000422465 IDH1O75874 414 aaKnown RBP12.16□□□□□ -0.46
RPS3-202ENST00000422465 ALDH1B1P30837 517 aa12.16□□□□□ -0.46
RPS3-202ENST00000422465 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
RPS3-202ENST00000422465 CCT2P78371 535 aaKnown RBP12.16□□□□□ -0.46
RPS3-202ENST00000422465 RASGRF1Q13972 1273 aa12.16□□□□□ -0.46
RPS3-202ENST00000422465 SLC10A5Q5PT55 438 aa12.16□□□□□ -0.46
RPS3-202ENST00000422465 USP50Q70EL3 339 aaPredicted RBP12.16□□□□□ -0.46
RPS3-202ENST00000422465 CHST3Q7LGC8 479 aa12.16□□□□□ -0.46
RPS3-202ENST00000422465 SPATA32Q96LK8 384 aa12.16□□□□□ -0.46
RPS3-202ENST00000422465 HPS5Q9UPZ3 1129 aa12.16□□□□□ -0.46
RPS3-202ENST00000422465 TNRC18O15417 2968 aaPredicted RBP12.15□□□□□ -0.46
RPS3-202ENST00000422465 A0A1B0GUL6 1792 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 TRPM7Q96QT4 1865 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 LTBP1Q14766 1721 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 KLRG2A4D1S0 409 aaPredicted RBP12.15□□□□□ -0.46
RPS3-202ENST00000422465 FAM177BA6PVY3 158 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 PATL2C9JE40 543 aaKnown RBP12.15□□□□□ -0.46
RPS3-202ENST00000422465 SMAPO00193 183 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 FDPSP14324 419 aaKnown RBP12.15□□□□□ -0.46
RPS3-202ENST00000422465 CHRNDQ07001 517 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 MAP3K12Q12852 859 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 GRM1Q13255 1194 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 DGKZQ13574 1117 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 GRIPAP1Q4V328 841 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 RBM43Q6ZSC3 357 aaKnown RBP12.15□□□□□ -0.46
RPS3-202ENST00000422465 RALYLQ86SE5 291 aaKnown RBP12.15□□□□□ -0.46
RPS3-202ENST00000422465 ZSCAN30Q86W11 494 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 NBPF5PQ86XG9 351 aaPredicted RBP12.15□□□□□ -0.46
RPS3-202ENST00000422465 TBC1D10CQ8IV04 446 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 RNF214Q8ND24 703 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 PSMD1Q99460 953 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 DDX19AQ9NUU7 478 aaKnown RBP12.15□□□□□ -0.46
RPS3-202ENST00000422465 TFIP11Q9UBB9 837 aaKnown RBP12.15□□□□□ -0.46
RPS3-202ENST00000422465 SEPT9Q9UHD8 586 aaPredicted RBP12.15□□□□□ -0.46
RPS3-202ENST00000422465 RCOR1Q9UKL0 485 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 CFAP45Q9UL16 551 aa12.15□□□□□ -0.46
RPS3-202ENST00000422465 COL4A1P02462 1669 aa12.14□□□□□ -0.47
RPS3-202ENST00000422465 KLF18A0A0U1RQI7 1052 aa12.14□□□□□ -0.47
RPS3-202ENST00000422465 SH2B2O14492 632 aaPredicted RBP12.14□□□□□ -0.47
RPS3-202ENST00000422465 DHX16O60231 1041 aaKnown RBP12.14□□□□□ -0.47
RPS3-202ENST00000422465 LIG1P18858 919 aa12.14□□□□□ -0.47
RPS3-202ENST00000422465 CC2D2BQ6DHV5 1058 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms