RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 NUP133Q8WUM0 1156 aa9.85□□□□□ -0.83
SSB-205ENST00000422006 MPHOSPH9Q99550 1183 aa9.85□□□□□ -0.83
SSB-205ENST00000422006 PARD6BQ9BYG5 372 aa9.85□□□□□ -0.83
SSB-205ENST00000422006 SPATA7Q9P0W8 599 aa9.85□□□□□ -0.83
SSB-205ENST00000422006 TNNQ9UQP3 1299 aa9.85□□□□□ -0.83
SSB-205ENST00000422006 TMEM98Q9Y2Y6 226 aa9.85□□□□□ -0.83
SSB-205ENST00000422006 ST18O60284 1047 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 N4BP1O75113 896 aaKnown RBP9.84□□□□□ -0.83
SSB-205ENST00000422006 CDR1P51861 262 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 ACTN3Q08043 901 aaPredicted RBP9.84□□□□□ -0.83
SSB-205ENST00000422006 FOXD4Q12950 439 aaPredicted RBP9.84□□□□□ -0.83
SSB-205ENST00000422006 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
SSB-205ENST00000422006 GORABQ5T7V8 394 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 DPH6Q7L8W6 267 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 CXorf38Q8TB03 319 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 FAM71BQ8TC56 605 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 EPC1Q9H2F5 836 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 NPDC1Q9NQX5 325 aaPredicted RBP9.84□□□□□ -0.83
SSB-205ENST00000422006 KLC4Q9NSK0 619 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 ZMIZ1Q9ULJ6 1067 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.84□□□□□ -0.83
SSB-205ENST00000422006 MAPK8IP1Q9UQF2 711 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 QRICH2Q9H0J4 1663 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 IBSPP21815 317 aaPredicted RBP9.84□□□□□ -0.83
SSB-205ENST00000422006 EIF4BP23588 611 aaKnown RBP9.84□□□□□ -0.83
SSB-205ENST00000422006 GCLCP48506 637 aaPredicted RBP9.84□□□□□ -0.83
SSB-205ENST00000422006 CCT5P48643 541 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 SCNN1BP51168 640 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 MPP3Q13368 585 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 CAPRIN2Q6IMN6 1127 aaKnown RBP9.84□□□□□ -0.83
SSB-205ENST00000422006 NPAS4Q8IUM7 802 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 MAGEC3Q8TD91 643 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 KCNN1Q92952 543 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 PRAM1Q96QH2 718 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 OSBPL9Q96SU4 736 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 SLC39A2Q9NP94 309 aa9.84□□□□□ -0.83
SSB-205ENST00000422006 CCDC151A5D8V7 595 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 C7P10643 843 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 CYP11B2P19099 503 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 UBE2HP62256 183 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 SLC7A5Q01650 507 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 ROR2Q01974 943 aaKnown RBP9.83□□□□□ -0.84
SSB-205ENST00000422006 PRPF4BQ13523 1007 aaKnown RBP9.83□□□□□ -0.84
SSB-205ENST00000422006 PUS10Q3MIT2 529 aaKnown RBP9.83□□□□□ -0.84
SSB-205ENST00000422006 TMEM164Q5U3C3 297 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 CDC37L1Q7L3B6 337 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 ARMC9Q7Z3E5 817 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 LUZP1Q86V48 1076 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 ADGRB1O14514 1584 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 TTC41PQ6P2S7 1318 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 SHTN1A0MZ66 631 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 F8VZ95 297 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 CAVIN2O95810 425 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 GBP2P32456 591 aaPredicted RBP9.83□□□□□ -0.84
SSB-205ENST00000422006 ARID5BQ14865 1188 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 LRRFIP1Q32MZ4 808 aaKnown RBP9.83□□□□□ -0.84
SSB-205ENST00000422006 MIS18BP1Q6P0N0 1132 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 IQCF2Q8IXL9 164 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 TEKT1Q969V4 418 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 RBM41Q96IZ5 413 aaKnown RBP9.83□□□□□ -0.84
SSB-205ENST00000422006 ALS2CR12Q96Q35 445 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 TRIM4Q9C037 500 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 DNAAF2Q9NVR5 837 aaKnown RBP9.83□□□□□ -0.84
SSB-205ENST00000422006 PHLPP2Q6ZVD8 1323 aa9.83□□□□□ -0.84
SSB-205ENST00000422006 RAB11FIP3O75154 756 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 RNF8O76064 485 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 NBPF7P0C2Y1 421 aaPredicted RBP9.82□□□□□ -0.84
SSB-205ENST00000422006 CD44P16070 742 aaKnown RBP9.82□□□□□ -0.84
SSB-205ENST00000422006 VCAM1P19320 739 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 PAPOLAP51003 745 aaKnown RBP9.82□□□□□ -0.84
SSB-205ENST00000422006 NUCB1Q02818 461 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 MVPQ14764 893 aaKnown RBP9.82□□□□□ -0.84
SSB-205ENST00000422006 BRD3Q15059 726 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 LRRC23Q53EV4 343 aaPredicted RBP9.82□□□□□ -0.84
SSB-205ENST00000422006 MICALCLQ6ZW33 695 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 CEP57Q86XR8 500 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 MIPOL1Q8TD10 442 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 GPATCH3Q96I76 525 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 MTRQ99707 1265 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 CARD6Q9BX69 1037 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 FAM204AQ9H8W3 233 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 TBC1D7Q9P0N9 293 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 PXDNLA1KZ92 1463 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 COL18A1P39060 1754 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 SYT1P21579 422 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 TMEM62Q0P6H9 643 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 HDXQ7Z353 690 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 KCNH5Q8NCM2 988 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 RSRC1Q96IZ7 334 aaKnown RBP9.82□□□□□ -0.84
SSB-205ENST00000422006 PPP1R13BQ96KQ4 1090 aa9.82□□□□□ -0.84
SSB-205ENST00000422006 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.82□□□□□ -0.84
SSB-205ENST00000422006 ERICH2A1L162 156 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 CCDC69A6NI79 296 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 PDLIM1O00151 329 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 RASSF9O75901 435 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 SMTNP53814 917 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 RARSP54136 660 aaKnown RBP9.81□□□□□ -0.84
SSB-205ENST00000422006 G3BP1Q13283 466 aaKnown RBP eCLIP9.81□□□□□ -0.845e-6■■□□□ 11.9
SSB-205ENST00000422006 VPS53Q5VIR6 699 aa9.81□□□□□ -0.84
SSB-205ENST00000422006 C9orf131Q5VYM1 1079 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms