RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CFBP00751 764 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 LETM2Q2VYF4 491 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 PKNOX2Q96KN3 472 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 TSG101Q99816 390 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 TCHPQ9BT92 498 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 RBM28Q9NW13 759 aaKnown RBP11.11□□□□□ -0.63
CMSS1-201ENST00000421999 MRE11P49959 708 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 DYNLL2Q96FJ2 89 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 BCL2L12Q9HB09 334 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 INCENPQ9NQS7 918 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 BMP15O95972 392 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 DDR1Q08345 913 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 BICD1Q96G01 975 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-201ENST00000421999 MYCLP12524 364 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-201ENST00000421999 MCM7P33993 719 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 ICA1Q05084 483 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 CCDC174Q6PII3 467 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 GADL1Q6ZQY3 521 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 SH3RF3Q8TEJ3 882 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-201ENST00000421999 SLC16A10Q8TF71 515 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 UBE2Q2Q8WVN8 375 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 DLG5Q8TDM6 1919 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 DPEP1P16444 411 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 SUPT20HL1Q3ZLR7 823 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 GTF3C6Q969F1 213 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 AS3MTQ9HBK9 375 aa11.1□□□□□ -0.63
CMSS1-201ENST00000421999 GPHNQ9NQX3 736 aaPredicted RBP11.1□□□□□ -0.63
CMSS1-201ENST00000421999 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.631e-7■■■■■ 166.5
CMSS1-201ENST00000421999 KRT2P35908 639 aa11.09□□□□□ -0.63
CMSS1-201ENST00000421999 AFMP43652 599 aa11.09□□□□□ -0.63
CMSS1-201ENST00000421999 JAKMIP3Q5VZ66 844 aa11.09□□□□□ -0.63
CMSS1-201ENST00000421999 KRT79Q5XKE5 535 aa11.09□□□□□ -0.63
CMSS1-201ENST00000421999 LRRC47Q8N1G4 583 aaKnown RBP11.09□□□□□ -0.63
CMSS1-201ENST00000421999 IL25Q9H293 177 aa11.09□□□□□ -0.63
CMSS1-201ENST00000421999 ZSWIM5Q9P217 1185 aa11.09□□□□□ -0.63
CMSS1-201ENST00000421999 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
CMSS1-201ENST00000421999 POLRMTO00411 1230 aaKnown RBP11.09□□□□□ -0.63
CMSS1-201ENST00000421999 TBC1D10BQ4KMP7 808 aaPredicted RBP11.09□□□□□ -0.63
CMSS1-201ENST00000421999 ABT1Q9ULW3 272 aaKnown RBP11.09□□□□□ -0.63
CMSS1-201ENST00000421999 NOD1Q9Y239 953 aa11.09□□□□□ -0.63
CMSS1-201ENST00000421999 ENOX2Q16206 610 aaKnown RBP11.09□□□□□ -0.63
CMSS1-201ENST00000421999 TXNRD3Q86VQ6 643 aa11.09□□□□□ -0.63
CMSS1-201ENST00000421999 LLPHQ9BRT6 129 aaKnown RBP11.09□□□□□ -0.63
CMSS1-201ENST00000421999 GOPCQ9HD26 462 aa11.09□□□□□ -0.63
CMSS1-201ENST00000421999 CYP2D6P10635 497 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 SYKP43405 635 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 STXBP4Q6ZWJ1 553 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 PNMA1Q8ND90 353 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 CHURC1Q8WUH1 139 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 ZNF274Q96GC6 653 aaPredicted RBP11.08□□□□□ -0.64
CMSS1-201ENST00000421999 GINS2Q9Y248 185 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 SMTNL1A8MU46 457 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 SRGNP10124 158 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 TRIM21P19474 475 aaKnown RBP11.08□□□□□ -0.64
CMSS1-201ENST00000421999 PDIA3P30101 505 aaKnown RBP11.08□□□□□ -0.64
CMSS1-201ENST00000421999 STAT6P42226 847 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 MIGA2Q7L4E1 593 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 ANO10Q9NW15 660 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 SERPINB13Q9UIV8 391 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 STRCQ7RTU9 1775 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 MED23Q9ULK4 1368 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 DEXIO95424 95 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 MKRN3Q13064 507 aaKnown RBP11.08□□□□□ -0.64
CMSS1-201ENST00000421999 ABCB5Q2M3G0 1257 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 FBXO33Q7Z6M2 555 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 SPICE1Q8N0Z3 855 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 FANCBQ8NB91 859 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 TDRD3Q9H7E2 651 aaKnown RBP11.08□□□□□ -0.64
CMSS1-201ENST00000421999 MRC1P22897 1456 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 GOLGA8HP0CJ92 632 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 CRKP46108 304 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 PKP1Q13835 747 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 BRDTQ58F21 947 aaPredicted RBP11.08□□□□□ -0.64
CMSS1-201ENST00000421999 UIMC1Q96RL1 719 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 MXD3Q9BW11 206 aa11.08□□□□□ -0.64
CMSS1-201ENST00000421999 LUC7LQ9NQ29 371 aaKnown RBP11.08□□□□□ -0.64
CMSS1-201ENST00000421999 WTIPA6NIX2 430 aaPredicted RBP11.07□□□□□ -0.64
CMSS1-201ENST00000421999 FLOT1O75955 427 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 UBE2HP62256 183 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 NSUN4Q96CB9 384 aaKnown RBP11.07□□□□□ -0.64
CMSS1-201ENST00000421999 DISP2A7MBM2 1401 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 ZNF609O15014 1411 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 CHMP2AO43633 222 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 ALAS1P13196 640 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 CCDC40Q4G0X9 1142 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 KCNG4Q8TDN1 519 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 PLIN2Q99541 437 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 KCNJ14Q9UNX9 436 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 LMO7Q8WWI1 1683 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 GSG1L2A8MUP6 293 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 CDC37L1Q7L3B6 337 aa11.07□□□□□ -0.64
CMSS1-201ENST00000421999 ABCC6O95255 1503 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 NOP56O00567 594 aaKnown RBP11.06□□□□□ -0.64
CMSS1-201ENST00000421999 CBFA2T2O43439 604 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 PFKFB2O60825 505 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 GDF11O95390 407 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 CA8P35219 290 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 CCDC173Q0VFZ6 552 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 SCRN1Q12765 414 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms