RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 KIF14Q15058 1648 aa8.07□□□□□ -1.12
SFXN1-202ENST00000421887 BUD31P41223 144 aaPredicted RBP8.07□□□□□ -1.12
SFXN1-202ENST00000421887 MPZL3Q6UWV2 235 aa8.07□□□□□ -1.12
SFXN1-202ENST00000421887 SIAH1Q8IUQ4 282 aa8.07□□□□□ -1.12
SFXN1-202ENST00000421887 WDR89Q96FK6 387 aaPredicted RBP8.07□□□□□ -1.12
SFXN1-202ENST00000421887 FANCD2OSQ96PS1 177 aa8.07□□□□□ -1.12
SFXN1-202ENST00000421887 ATXN3LQ9H3M9 355 aa8.07□□□□□ -1.12
SFXN1-202ENST00000421887 CLTCQ00610 1675 aaKnown RBP8.07□□□□□ -1.12
SFXN1-202ENST00000421887 SHANK2Q9UPX8 1470 aa8.06□□□□□ -1.12
SFXN1-202ENST00000421887 SLFN14P0C7P3 912 aa8.06□□□□□ -1.12
SFXN1-202ENST00000421887 IKZF1Q13422 519 aa8.06□□□□□ -1.12
SFXN1-202ENST00000421887 DUSP23Q9BVJ7 150 aa8.06□□□□□ -1.12
SFXN1-202ENST00000421887 SYNGAP1Q96PV0 1343 aa8.05□□□□□ -1.12
SFXN1-202ENST00000421887 HCLS1P14317 486 aaPredicted RBP8.05□□□□□ -1.12
SFXN1-202ENST00000421887 ID3Q02535 119 aa8.05□□□□□ -1.12
SFXN1-202ENST00000421887 ZP2Q05996 745 aa8.05□□□□□ -1.12
SFXN1-202ENST00000421887 TTLL4Q14679 1199 aa8.05□□□□□ -1.12
SFXN1-202ENST00000421887 PRR23BQ6ZRT6 265 aa8.05□□□□□ -1.12
SFXN1-202ENST00000421887 CLIP1P30622 1438 aa8.04□□□□□ -1.12
SFXN1-202ENST00000421887 AP3B2Q13367 1082 aa8.04□□□□□ -1.12
SFXN1-202ENST00000421887 FYB2Q5VWT5 728 aa8.04□□□□□ -1.12
SFXN1-202ENST00000421887 ZNF576Q9H609 170 aa8.04□□□□□ -1.12
SFXN1-202ENST00000421887 CCDC86Q9H6F5 360 aaKnown RBP8.04□□□□□ -1.12
SFXN1-202ENST00000421887 RGS17Q9UGC6 210 aaPredicted RBP8.04□□□□□ -1.12
SFXN1-202ENST00000421887 KIDINS220Q9ULH0 1771 aa8.04□□□□□ -1.12
SFXN1-202ENST00000421887 CDC42BPBQ9Y5S2 1711 aa8.03□□□□□ -1.12
SFXN1-202ENST00000421887 ITSN2Q9NZM3 1697 aa8.03□□□□□ -1.12
SFXN1-202ENST00000421887 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.03□□□□□ -1.12
SFXN1-202ENST00000421887 C1QTNF9P0C862 333 aa8.03□□□□□ -1.12
SFXN1-202ENST00000421887 GALNT12Q8IXK2 581 aa8.03□□□□□ -1.12
SFXN1-202ENST00000421887 ASB11Q8WXH4 323 aa8.03□□□□□ -1.12
SFXN1-202ENST00000421887 SSU72Q9NP77 194 aaKnown RBP8.03□□□□□ -1.12
SFXN1-202ENST00000421887 DISC1Q9NRI5 854 aa8.03□□□□□ -1.12
SFXN1-202ENST00000421887 CTNND2Q9UQB3 1225 aa8.03□□□□□ -1.12
SFXN1-202ENST00000421887 DNMT1P26358 1616 aaKnown RBP8.03□□□□□ -1.12
SFXN1-202ENST00000421887 A2ML1A8K2U0 1454 aa8.02□□□□□ -1.13
SFXN1-202ENST00000421887 NFIBO00712 420 aa8.02□□□□□ -1.13
SFXN1-202ENST00000421887 AFMP43652 599 aa8.02□□□□□ -1.13
SFXN1-202ENST00000421887 ZNF157P51786 506 aaPredicted RBP8.02□□□□□ -1.13
SFXN1-202ENST00000421887 GGT6Q6P531 493 aa8.02□□□□□ -1.13
SFXN1-202ENST00000421887 TTLL10Q6ZVT0 673 aa8.02□□□□□ -1.13
SFXN1-202ENST00000421887 TOP6BLQ8N6T0 577 aa8.02□□□□□ -1.13
SFXN1-202ENST00000421887 PCOLCE2Q9UKZ9 415 aa8.02□□□□□ -1.13
SFXN1-202ENST00000421887 SNX11Q9Y5W9 270 aa8.02□□□□□ -1.13
SFXN1-202ENST00000421887 SETD1AO15047 1707 aaKnown RBP8.01□□□□□ -1.13
SFXN1-202ENST00000421887 RNF17Q9BXT8 1623 aaKnown RBP8.01□□□□□ -1.13
SFXN1-202ENST00000421887 FZD6O60353 706 aa8.01□□□□□ -1.13
SFXN1-202ENST00000421887 FAM13AO94988 1023 aa8.01□□□□□ -1.13
SFXN1-202ENST00000421887 EHD4Q9H223 541 aa8.01□□□□□ -1.13
SFXN1-202ENST00000421887 CCDC87Q9NVE4 849 aa8.01□□□□□ -1.13
SFXN1-202ENST00000421887 ABCC1P33527 1531 aa8.01□□□□□ -1.13
SFXN1-202ENST00000421887 GLI1P08151 1106 aa8□□□□□ -1.13
SFXN1-202ENST00000421887 TNKS2Q9H2K2 1166 aa8□□□□□ -1.13
SFXN1-202ENST00000421887 PREX2Q70Z35 1606 aa8□□□□□ -1.13
SFXN1-202ENST00000421887 ZNF862O60290 1169 aa7.99□□□□□ -1.13
SFXN1-202ENST00000421887 ITPKAP23677 461 aa7.99□□□□□ -1.13
SFXN1-202ENST00000421887 TROQ12816 1431 aaPredicted RBP7.99□□□□□ -1.13
SFXN1-202ENST00000421887 GJD3Q8N144 294 aa7.99□□□□□ -1.13
SFXN1-202ENST00000421887 THEMISQ8N1K5 641 aaPredicted RBP7.99□□□□□ -1.13
SFXN1-202ENST00000421887 NEURL4Q96JN8 1562 aa7.99□□□□□ -1.13
SFXN1-202ENST00000421887 ALKQ9UM73 1620 aa7.99□□□□□ -1.13
SFXN1-202ENST00000421887 SPAG9O60271 1321 aaKnown RBP7.99□□□□□ -1.13
SFXN1-202ENST00000421887 SYNMO15061 1565 aa7.98□□□□□ -1.13
SFXN1-202ENST00000421887 VWDEQ8N2E2 1590 aa7.98□□□□□ -1.13
SFXN1-202ENST00000421887 FMN1Q68DA7 1419 aa7.98□□□□□ -1.13
SFXN1-202ENST00000421887 NPIPB6E9PJ23 425 aa7.98□□□□□ -1.13
SFXN1-202ENST00000421887 TMEM67Q5HYA8 995 aa7.98□□□□□ -1.13
SFXN1-202ENST00000421887 USPL1Q5W0Q7 1092 aa7.98□□□□□ -1.13
SFXN1-202ENST00000421887 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.98□□□□□ -1.13
SFXN1-202ENST00000421887 KIRREL1Q96J84 757 aa7.98□□□□□ -1.13
SFXN1-202ENST00000421887 HEXIM2Q96MH2 286 aaKnown RBP7.98□□□□□ -1.13
SFXN1-202ENST00000421887 DIRC2Q96SL1 478 aa7.98□□□□□ -1.13
SFXN1-202ENST00000421887 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
SFXN1-202ENST00000421887 IQGAP1P46940 1657 aa7.98□□□□□ -1.13
SFXN1-202ENST00000421887 NPHP4O75161 1426 aaPredicted RBP7.97□□□□□ -1.13
SFXN1-202ENST00000421887 INHBBP09529 407 aa7.97□□□□□ -1.13
SFXN1-202ENST00000421887 NPR3P17342 541 aa7.97□□□□□ -1.13
SFXN1-202ENST00000421887 HNRNPUQ00839 825 aaKnown RBP eCLIP7.97□□□□□ -1.13
SFXN1-202ENST00000421887 KIAA0319Q5VV43 1072 aa7.97□□□□□ -1.13
SFXN1-202ENST00000421887 CYFIP1Q7L576 1253 aa7.97□□□□□ -1.13
SFXN1-202ENST00000421887 PBXIP1Q96AQ6 731 aa7.97□□□□□ -1.13
SFXN1-202ENST00000421887 SAMD9LQ8IVG5 1584 aa7.97□□□□□ -1.13
SFXN1-202ENST00000421887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.97□□□□□ -1.13
SFXN1-202ENST00000421887 KRT1P04264 644 aa7.96□□□□□ -1.14
SFXN1-202ENST00000421887 KIF4BQ2VIQ3 1234 aa7.96□□□□□ -1.14
SFXN1-202ENST00000421887 FBXO15Q8NCQ5 510 aaPredicted RBP7.96□□□□□ -1.14
SFXN1-202ENST00000421887 ISL2Q96A47 359 aa7.96□□□□□ -1.14
SFXN1-202ENST00000421887 GTF2IRD1Q9UHL9 959 aa7.96□□□□□ -1.14
SFXN1-202ENST00000421887 RAPGEFL1Q9UHV5 662 aa7.96□□□□□ -1.14
SFXN1-202ENST00000421887 PCDHGC5Q9Y5F6 944 aa7.96□□□□□ -1.14
SFXN1-202ENST00000421887 LRRC7Q96NW7 1537 aa7.96□□□□□ -1.14
SFXN1-202ENST00000421887 FAM135AQ9P2D6 1515 aa7.96□□□□□ -1.14
SFXN1-202ENST00000421887 DEPDC5O75140 1603 aa7.96□□□□□ -1.14
SFXN1-202ENST00000421887 TNRQ92752 1358 aa7.96□□□□□ -1.14
SFXN1-202ENST00000421887 CDC42BPAQ5VT25 1732 aa7.95□□□□□ -1.14
SFXN1-202ENST00000421887 A2MP01023 1474 aa7.95□□□□□ -1.14
SFXN1-202ENST00000421887 ATP7AQ04656 1500 aa7.95□□□□□ -1.14
SFXN1-202ENST00000421887 NEFMP07197 916 aa7.95□□□□□ -1.14
SFXN1-202ENST00000421887 GSTP1P09211 210 aaKnown RBP7.95□□□□□ -1.14
SFXN1-202ENST00000421887 TMEM253P0C7T8 217 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms