RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 LOC285556D6RIA3 1793 aa17.89■□□□□ 0.45
LINC01840-201ENST00000421870 GLRX3O76003 335 aaKnown RBP17.89■□□□□ 0.45
LINC01840-201ENST00000421870 MBD4O95243 580 aa17.89■□□□□ 0.45
LINC01840-201ENST00000421870 POLR3DP05423 398 aaPredicted RBP17.89■□□□□ 0.45
LINC01840-201ENST00000421870 SHROOM1Q2M3G4 852 aaPredicted RBP17.89■□□□□ 0.45
LINC01840-201ENST00000421870 ANKRD45Q5TZF3 282 aa17.89■□□□□ 0.45
LINC01840-201ENST00000421870 OTUD7AQ8TE49 926 aaPredicted RBP17.89■□□□□ 0.45
LINC01840-201ENST00000421870 PARK7Q99497 189 aaKnown RBP17.89■□□□□ 0.45
LINC01840-201ENST00000421870 PUS7LQ9H0K6 701 aaKnown RBP17.89■□□□□ 0.45
LINC01840-201ENST00000421870 MCM9Q9NXL9 1143 aa17.89■□□□□ 0.45
LINC01840-201ENST00000421870 CPA4Q9UI42 421 aa17.89■□□□□ 0.45
LINC01840-201ENST00000421870 ZBTB21Q9ULJ3 1066 aa17.89■□□□□ 0.45
LINC01840-201ENST00000421870 BAZ2AQ9UIF9 1905 aaKnown RBP17.89■□□□□ 0.45
LINC01840-201ENST00000421870 C19orf81C9J6K1 198 aa17.88■□□□□ 0.45
LINC01840-201ENST00000421870 ERC2O15083 957 aa17.88■□□□□ 0.45
LINC01840-201ENST00000421870 PRKAB2O43741 272 aa17.88■□□□□ 0.45
LINC01840-201ENST00000421870 GDF11O95390 407 aa17.88■□□□□ 0.45
LINC01840-201ENST00000421870 CYP2C8P10632 490 aa17.88■□□□□ 0.45
LINC01840-201ENST00000421870 BCRP11274 1271 aa17.88■□□□□ 0.45
LINC01840-201ENST00000421870 BACE1P56817 501 aa17.88■□□□□ 0.45
LINC01840-201ENST00000421870 LACTBP83111 547 aaPredicted RBP17.88■□□□□ 0.45
LINC01840-201ENST00000421870 GNRH1P01148 92 aa17.87■□□□□ 0.45
LINC01840-201ENST00000421870 ZFYP08048 801 aaPredicted RBP17.87■□□□□ 0.45
LINC01840-201ENST00000421870 MX1P20591 662 aa17.87■□□□□ 0.45
LINC01840-201ENST00000421870 SHMT1P34896 483 aa17.87■□□□□ 0.45
LINC01840-201ENST00000421870 CERKLQ49MI3 558 aaPredicted RBP17.87■□□□□ 0.45
LINC01840-201ENST00000421870 TREML2Q5T2D2 321 aa17.87■□□□□ 0.45
LINC01840-201ENST00000421870 SMC5Q8IY18 1101 aa17.87■□□□□ 0.45
LINC01840-201ENST00000421870 EXOC6Q8TAG9 804 aa17.87■□□□□ 0.45
LINC01840-201ENST00000421870 STRBPQ96SI9 672 aaKnown RBP17.87■□□□□ 0.45
LINC01840-201ENST00000421870 RWDD1Q9H446 243 aaPredicted RBP17.87■□□□□ 0.45
LINC01840-201ENST00000421870 STAP2Q9UGK3 403 aa17.87■□□□□ 0.45
LINC01840-201ENST00000421870 MGAMO43451 1857 aa17.86■□□□□ 0.45
LINC01840-201ENST00000421870 HTTP42858 3142 aa17.86■□□□□ 0.45
LINC01840-201ENST00000421870 USP17L10C9JJH3 530 aa17.86■□□□□ 0.45
LINC01840-201ENST00000421870 RNF113AO15541 343 aaKnown RBP17.86■□□□□ 0.45
LINC01840-201ENST00000421870 GH2P01242 217 aa17.86■□□□□ 0.45
LINC01840-201ENST00000421870 HMGCS2P54868 508 aa17.86■□□□□ 0.45
LINC01840-201ENST00000421870 EVX2Q03828 476 aa17.86■□□□□ 0.45
LINC01840-201ENST00000421870 KIF22Q14807 665 aa17.86■□□□□ 0.45
LINC01840-201ENST00000421870 APPBP2Q92624 585 aa17.86■□□□□ 0.45
LINC01840-201ENST00000421870 ZSWIM8A7E2V4 1837 aa17.86■□□□□ 0.45
LINC01840-201ENST00000421870 IGHDP01880 384 aa17.85■□□□□ 0.45
LINC01840-201ENST00000421870 CTGFP29279 349 aa17.85■□□□□ 0.45
LINC01840-201ENST00000421870 HOXA7P31268 230 aaPredicted RBP17.85■□□□□ 0.45
LINC01840-201ENST00000421870 ABCB5Q2M3G0 1257 aa17.85■□□□□ 0.45
LINC01840-201ENST00000421870 C12orf60Q5U649 245 aa17.85■□□□□ 0.45
LINC01840-201ENST00000421870 OSBP2Q969R2 916 aa17.85■□□□□ 0.45
LINC01840-201ENST00000421870 ARHGAP39Q9C0H5 1083 aa17.85■□□□□ 0.45
LINC01840-201ENST00000421870 ZBTB47Q9UFB7 747 aaPredicted RBP17.85■□□□□ 0.45
LINC01840-201ENST00000421870 SLC4A4Q9Y6R1 1079 aa17.85■□□□□ 0.45
LINC01840-201ENST00000421870 USP17L12C9JPN9 530 aa17.84■□□□□ 0.45
LINC01840-201ENST00000421870 USP17L21D6R901 530 aa17.84■□□□□ 0.45
LINC01840-201ENST00000421870 CYP2D6P10635 497 aa17.84■□□□□ 0.45
LINC01840-201ENST00000421870 PRMT2P55345 433 aa17.84■□□□□ 0.45
LINC01840-201ENST00000421870 PABPC4Q13310 644 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC01840-201ENST00000421870 MTMR2Q13614 643 aa17.84■□□□□ 0.45
LINC01840-201ENST00000421870 LRRFIP1Q32MZ4 808 aaKnown RBP17.84■□□□□ 0.45
LINC01840-201ENST00000421870 SWAP70Q9UH65 585 aa17.84■□□□□ 0.45
LINC01840-201ENST00000421870 PNMA3Q9UL41 463 aa17.84■□□□□ 0.45
LINC01840-201ENST00000421870 CENPFP49454 3210 aa17.84■□□□□ 0.45
LINC01840-201ENST00000421870 MYH8P13535 1937 aa17.84■□□□□ 0.45
LINC01840-201ENST00000421870 GSG1L2A8MUP6 293 aa17.83■□□□□ 0.44
LINC01840-201ENST00000421870 GUCY1A2P33402 732 aa17.83■□□□□ 0.44
LINC01840-201ENST00000421870 PSMC4P43686 418 aa17.83■□□□□ 0.44
LINC01840-201ENST00000421870 PDE1AP54750 535 aa17.83■□□□□ 0.44
LINC01840-201ENST00000421870 GIMAP6Q6P9H5 292 aa17.83■□□□□ 0.44
LINC01840-201ENST00000421870 CTR9Q6PD62 1173 aa17.83■□□□□ 0.44
LINC01840-201ENST00000421870 TRIM47Q96LD4 638 aa17.83■□□□□ 0.44
LINC01840-201ENST00000421870 CABP5Q9NP86 173 aa17.83■□□□□ 0.44
LINC01840-201ENST00000421870 EMILIN3Q9NT22 766 aa17.83■□□□□ 0.44
LINC01840-201ENST00000421870 TMOD4Q9NZQ9 345 aa17.83■□□□□ 0.44
LINC01840-201ENST00000421870 OSBPP22059 807 aa17.82■□□□□ 0.44
LINC01840-201ENST00000421870 SBK1Q52WX2 424 aa17.82■□□□□ 0.44
LINC01840-201ENST00000421870 SMCR8Q8TEV9 937 aaPredicted RBP17.82■□□□□ 0.44
LINC01840-201ENST00000421870 ARMC5Q96C12 935 aa17.82■□□□□ 0.44
LINC01840-201ENST00000421870 DDRGK1Q96HY6 314 aa17.82■□□□□ 0.44
LINC01840-201ENST00000421870 C12orf42Q96LP6 360 aa17.82■□□□□ 0.44
LINC01840-201ENST00000421870 ASCC2Q9H1I8 757 aaPredicted RBP17.82■□□□□ 0.44
LINC01840-201ENST00000421870 SMIM22K7EJ46 135 aa17.81■□□□□ 0.44
LINC01840-201ENST00000421870 GCLCP48506 637 aaPredicted RBP17.81■□□□□ 0.44
LINC01840-201ENST00000421870 RAB3GAP1Q15042 981 aa17.81■□□□□ 0.44
LINC01840-201ENST00000421870 USP17L2Q6R6M4 530 aa17.81■□□□□ 0.44
LINC01840-201ENST00000421870 DYNLL2Q96FJ2 89 aa17.81■□□□□ 0.44
LINC01840-201ENST00000421870 KIAA1683Q9H0B3 1180 aa17.81■□□□□ 0.44
LINC01840-201ENST00000421870 SRRDQ9UH36 339 aa17.81■□□□□ 0.44
LINC01840-201ENST00000421870 DOCK3Q8IZD9 2030 aa17.81■□□□□ 0.44
LINC01840-201ENST00000421870 CYP2D7A0A087X1C5 515 aa17.8■□□□□ 0.44
LINC01840-201ENST00000421870 PATL2C9JE40 543 aaKnown RBP17.8■□□□□ 0.44
LINC01840-201ENST00000421870 GPAA1O43292 621 aa17.8■□□□□ 0.44
LINC01840-201ENST00000421870 FMNL1O95466 1100 aaPredicted RBP17.8■□□□□ 0.44
LINC01840-201ENST00000421870 GNAT2P19087 354 aa17.8■□□□□ 0.44
LINC01840-201ENST00000421870 HOXD10P28358 340 aa17.8■□□□□ 0.44
LINC01840-201ENST00000421870 CDK8P49336 464 aa17.8■□□□□ 0.44
LINC01840-201ENST00000421870 NUCB1Q02818 461 aa17.8■□□□□ 0.44
LINC01840-201ENST00000421870 SEPT2Q15019 361 aa17.8■□□□□ 0.44
LINC01840-201ENST00000421870 ZMYM1Q5SVZ6 1142 aa17.8■□□□□ 0.44
LINC01840-201ENST00000421870 C16orf86Q6ZW13 317 aa17.8■□□□□ 0.44
LINC01840-201ENST00000421870 TICAM2Q86XR7 235 aa17.8■□□□□ 0.44
LINC01840-201ENST00000421870 AMOTL1Q8IY63 956 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms