RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 SAP30BPQ9UHR5 308 aaKnown RBP23.04■■□□□ 1.28
VARS2-202ENST00000421263 DOCK3Q8IZD9 2030 aa23.04■■□□□ 1.28
VARS2-202ENST00000421263 HLA-DOAP06340 250 aa23.03■■□□□ 1.28
VARS2-202ENST00000421263 SHROOM1Q2M3G4 852 aaPredicted RBP23.03■■□□□ 1.28
VARS2-202ENST00000421263 TATDN1Q6P1N9 297 aa23.03■■□□□ 1.28
VARS2-202ENST00000421263 UBE2Q1Q7Z7E8 422 aa23.03■■□□□ 1.28
VARS2-202ENST00000421263 MIGA1Q8NAN2 632 aa23.03■■□□□ 1.28
VARS2-202ENST00000421263 RNF208Q9H0X6 261 aa23.03■■□□□ 1.28
VARS2-202ENST00000421263 BIN2Q9UBW5 565 aaPredicted RBP23.03■■□□□ 1.28
VARS2-202ENST00000421263 DDX19BQ9UMR2 479 aa23.03■■□□□ 1.28
VARS2-202ENST00000421263 MTMR2Q13614 643 aa23.02■■□□□ 1.28
VARS2-202ENST00000421263 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.02■■□□□ 1.28
VARS2-202ENST00000421263 COA7Q96BR5 231 aa23.02■■□□□ 1.28
VARS2-202ENST00000421263 KIF1BPQ96EK5 621 aa23.02■■□□□ 1.28
VARS2-202ENST00000421263 RIOK1Q9BRS2 568 aaKnown RBP23.02■■□□□ 1.28
VARS2-202ENST00000421263 MORF4L1Q9UBU8 362 aa23.02■■□□□ 1.28
VARS2-202ENST00000421263 ZBTB21Q9ULJ3 1066 aa23.02■■□□□ 1.28
VARS2-202ENST00000421263 COG6Q9Y2V7 657 aa23.02■■□□□ 1.28
VARS2-202ENST00000421263 USP17L10C9JJH3 530 aa23.01■■□□□ 1.27
VARS2-202ENST00000421263 GDF11O95390 407 aa23.01■■□□□ 1.27
VARS2-202ENST00000421263 USP5P45974 858 aa23.01■■□□□ 1.27
VARS2-202ENST00000421263 TRIM34Q9BYJ4 488 aa23.01■■□□□ 1.27
VARS2-202ENST00000421263 UNC93B1Q9H1C4 597 aa23.01■■□□□ 1.27
VARS2-202ENST00000421263 EHD4Q9H223 541 aa23.01■■□□□ 1.27
VARS2-202ENST00000421263 TMOD4Q9NZQ9 345 aa23.01■■□□□ 1.27
VARS2-202ENST00000421263 GJD2Q9UKL4 321 aa23.01■■□□□ 1.27
VARS2-202ENST00000421263 MYH1P12882 1939 aa23■■□□□ 1.27
VARS2-202ENST00000421263 ELNP15502 786 aa23■■□□□ 1.27
VARS2-202ENST00000421263 TTF1Q15361 905 aaPredicted RBP23■■□□□ 1.27
VARS2-202ENST00000421263 HABP4Q5JVS0 413 aaKnown RBP23■■□□□ 1.27
VARS2-202ENST00000421263 CLASRPQ8N2M8 674 aaKnown RBP23■■□□□ 1.27
VARS2-202ENST00000421263 P2RX7Q99572 595 aaKnown RBP23■■□□□ 1.27
VARS2-202ENST00000421263 HMMRO75330 724 aa22.99■■□□□ 1.27
VARS2-202ENST00000421263 SGPL1O95470 568 aa22.99■■□□□ 1.27
VARS2-202ENST00000421263 CAPN2P17655 700 aa22.99■■□□□ 1.27
VARS2-202ENST00000421263 U2AF1L4Q8WU68 220 aaKnown RBP22.99■■□□□ 1.27
VARS2-202ENST00000421263 SERPINB13Q9UIV8 391 aa22.99■■□□□ 1.27
VARS2-202ENST00000421263 RAB11FIP3O75154 756 aa22.98■■□□□ 1.27
VARS2-202ENST00000421263 INHAP05111 366 aa22.98■■□□□ 1.27
VARS2-202ENST00000421263 TTC6Q86TZ1 520 aa22.98■■□□□ 1.27
VARS2-202ENST00000421263 EMILIN3Q9NT22 766 aa22.98■■□□□ 1.27
VARS2-202ENST00000421263 PCDH10Q9P2E7 1040 aa22.98■■□□□ 1.27
VARS2-202ENST00000421263 GH2P01242 217 aa22.97■■□□□ 1.27
VARS2-202ENST00000421263 IRX3P78415 501 aaPredicted RBP22.97■■□□□ 1.27
VARS2-202ENST00000421263 CHMP4BQ9H444 224 aaKnown RBP22.97■■□□□ 1.27
VARS2-202ENST00000421263 HERVK_113P62684 666 aa22.96■■□□□ 1.27
VARS2-202ENST00000421263 SLC9C2Q5TAH2 1124 aa22.96■■□□□ 1.27
VARS2-202ENST00000421263 PAK6Q9NQU5 681 aaPredicted RBP22.96■■□□□ 1.27
VARS2-202ENST00000421263 RBPJLQ9UBG7 517 aa22.96■■□□□ 1.27
VARS2-202ENST00000421263 RCAN3Q9UKA8 241 aa22.96■■□□□ 1.27
VARS2-202ENST00000421263 MAGEB6P1A0A0J9YX57 407 aa22.95■■□□□ 1.26
VARS2-202ENST00000421263 TCRBV5S4A2TA0A5A2 114 aa22.95■■□□□ 1.26
VARS2-202ENST00000421263 IFIT2P09913 472 aaKnown RBP22.95■■□□□ 1.26
VARS2-202ENST00000421263 PDE6AP16499 860 aa22.95■■□□□ 1.26
VARS2-202ENST00000421263 PLCD1P51178 756 aa22.95■■□□□ 1.26
VARS2-202ENST00000421263 USP17L2Q6R6M4 530 aa22.95■■□□□ 1.26
VARS2-202ENST00000421263 POTEEQ6S8J3 1075 aa22.95■■□□□ 1.26
VARS2-202ENST00000421263 C12orf42Q96LP6 360 aa22.95■■□□□ 1.26
VARS2-202ENST00000421263 TXNRD2Q9NNW7 524 aa22.95■■□□□ 1.26
VARS2-202ENST00000421263 H0YGN5 161 aa22.94■■□□□ 1.26
VARS2-202ENST00000421263 APBB1O00213 710 aa22.94■■□□□ 1.26
VARS2-202ENST00000421263 GABPAQ06546 454 aa22.94■■□□□ 1.26
VARS2-202ENST00000421263 CERKLQ49MI3 558 aaPredicted RBP22.94■■□□□ 1.26
VARS2-202ENST00000421263 GPRC5AQ8NFJ5 357 aa22.94■■□□□ 1.26
VARS2-202ENST00000421263 ZNF532Q9HCE3 1301 aa22.93■■□□□ 1.26
VARS2-202ENST00000421263 GOLIM4O00461 696 aa22.93■■□□□ 1.26
VARS2-202ENST00000421263 SHMT1P34896 483 aa22.93■■□□□ 1.26
VARS2-202ENST00000421263 Q3C1V9 767 aa22.93■■□□□ 1.26
VARS2-202ENST00000421263 CRISPLD2Q9H0B8 497 aa22.93■■□□□ 1.26
VARS2-202ENST00000421263 PLXNB2O15031 1838 aa22.93■■□□□ 1.26
VARS2-202ENST00000421263 PEX10O60683 326 aa22.92■■□□□ 1.26
VARS2-202ENST00000421263 ATP5JP18859 108 aa22.92■■□□□ 1.26
VARS2-202ENST00000421263 PDE3AQ14432 1141 aa22.92■■□□□ 1.26
VARS2-202ENST00000421263 ABCB5Q2M3G0 1257 aa22.92■■□□□ 1.26
VARS2-202ENST00000421263 GTF3C2Q8WUA4 911 aaPredicted RBP22.92■■□□□ 1.26
VARS2-202ENST00000421263 DPF3Q92784 378 aa22.92■■□□□ 1.26
VARS2-202ENST00000421263 DEFB118Q96PH6 123 aa22.92■■□□□ 1.26
VARS2-202ENST00000421263 DNAJC2Q99543 621 aaKnown RBP22.92■■□□□ 1.26
VARS2-202ENST00000421263 HTATIP2Q9BUP3 242 aa22.92■■□□□ 1.26
VARS2-202ENST00000421263 CRNKL1Q9BZJ0 848 aaKnown RBP22.92■■□□□ 1.26
VARS2-202ENST00000421263 KIAA1683Q9H0B3 1180 aa22.92■■□□□ 1.26
VARS2-202ENST00000421263 TAOK2Q9UL54 1235 aa22.92■■□□□ 1.26
VARS2-202ENST00000421263 COLQQ9Y215 455 aaPredicted RBP22.92■■□□□ 1.26
VARS2-202ENST00000421263 DDX60LQ5H9U9 1706 aaKnown RBP22.91■■□□□ 1.26
VARS2-202ENST00000421263 FARP2O94887 1054 aaPredicted RBP22.91■■□□□ 1.26
VARS2-202ENST00000421263 HMGCRP04035 888 aa22.91■■□□□ 1.26
VARS2-202ENST00000421263 POLR3DP05423 398 aaPredicted RBP22.91■■□□□ 1.26
VARS2-202ENST00000421263 GUCY1A2P33402 732 aa22.91■■□□□ 1.26
VARS2-202ENST00000421263 EDC3Q96F86 508 aaKnown RBP22.91■■□□□ 1.26
VARS2-202ENST00000421263 TFRCP02786 760 aaKnown RBP22.9■■□□□ 1.26
VARS2-202ENST00000421263 USP14P54578 494 aa22.9■■□□□ 1.26
VARS2-202ENST00000421263 ERVK-9P63128 1117 aa22.9■■□□□ 1.26
VARS2-202ENST00000421263 ERVK-24P63145 666 aa22.9■■□□□ 1.26
VARS2-202ENST00000421263 CATSPERGQ6ZRH7 1159 aa22.9■■□□□ 1.26
VARS2-202ENST00000421263 CABP5Q9NP86 173 aa22.9■■□□□ 1.26
VARS2-202ENST00000421263 DCP1AQ9NPI6 582 aaPredicted RBP22.9■■□□□ 1.26
VARS2-202ENST00000421263 PAG1Q9NWQ8 432 aa22.9■■□□□ 1.26
VARS2-202ENST00000421263 CEP290O15078 2479 aa22.9■■□□□ 1.26
VARS2-202ENST00000421263 RPTORQ8N122 1335 aa22.89■■□□□ 1.26
VARS2-202ENST00000421263 USP17L15C9J2P7 530 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms