RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 FLIIQ13045 1269 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 DIXDC1Q155Q3 683 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 EPHA10Q5JZY3 1008 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 RASIP1Q5U651 963 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 CCDC174Q6PII3 467 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 G2E3Q7L622 706 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 ZSCAN29Q8IWY8 852 aaPredicted RBP11.37□□□□□ -0.59
TRIM39-206ENST00000420746 VGLL2Q8N8G2 317 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 HERVK_113Q902F9 699 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 PORCNQ9H237 461 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 AS3MTQ9HBK9 375 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 RBPJLQ9UBG7 517 aa11.37□□□□□ -0.59
TRIM39-206ENST00000420746 DDTLA6NHG4 134 aaPredicted RBP11.36□□□□□ -0.59
TRIM39-206ENST00000420746 USP17L5A8MUK1 530 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 PI4K2BG5E9Z4 385 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 PDE8BO95263 885 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 ZEB1P37275 1124 aaPredicted RBP11.36□□□□□ -0.59
TRIM39-206ENST00000420746 KCNQ1P51787 676 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 FOXK2Q01167 660 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 NHLH1Q02575 133 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 TFF2Q03403 129 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 RAB30Q15771 203 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 Q3C1V9 767 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 TSPYL6Q8N831 410 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 WDR18Q9BV38 432 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 PUS3Q9BZE2 481 aaKnown RBP11.36□□□□□ -0.59
TRIM39-206ENST00000420746 FLRT1Q9NZU1 646 aa11.36□□□□□ -0.59
TRIM39-206ENST00000420746 SLC15A5A6NIM6 579 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 LDHBP07195 334 aaKnown RBP11.35□□□□□ -0.59
TRIM39-206ENST00000420746 PBX2P40425 430 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 CCNA1P78396 465 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 ATP2B2Q01814 1243 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 FKBP5Q13451 457 aaPredicted RBP11.35□□□□□ -0.59
TRIM39-206ENST00000420746 CCDC129Q6ZRS4 1044 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 TRPV1Q8NER1 839 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 RNF216Q9NWF9 866 aaPredicted RBP11.35□□□□□ -0.59
TRIM39-206ENST00000420746 TMOD4Q9NZQ9 345 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 MSRAQ9UJ68 235 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 COG5Q9UP83 839 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 GAKO14976 1311 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 SALL1Q9NSC2 1324 aa11.35□□□□□ -0.59
TRIM39-206ENST00000420746 C19orf81C9J6K1 198 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 GRM8O00222 908 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 SEPT4O43236 478 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 IFIT1P09914 478 aaKnown RBP11.34□□□□□ -0.59
TRIM39-206ENST00000420746 PTPREP23469 700 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 PRDX5P30044 214 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 CAP2P40123 477 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 ADCYAP1R1P41586 468 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 BACE1P56817 501 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 TRIM26Q12899 539 aaPredicted RBP11.34□□□□□ -0.59
TRIM39-206ENST00000420746 GRB14Q14449 540 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 METTL24Q5JXM2 366 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 TOX2Q96NM4 488 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.34□□□□□ -0.594e-7■■□□□ 14.2
TRIM39-206ENST00000420746 CWC22Q9HCG8 908 aaKnown RBP11.34□□□□□ -0.59
TRIM39-206ENST00000420746 PHF24Q9UPV7 400 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 RABGAP1Q9Y3P9 1069 aa11.34□□□□□ -0.59
TRIM39-206ENST00000420746 FAM86C2PA6NEL3 165 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 ZBTB22O15209 634 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 TLL1O43897 1013 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 PEX10O60683 326 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 SLURP2P0DP57 97 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 POU3F3P20264 500 aaPredicted RBP11.33□□□□□ -0.6
TRIM39-206ENST00000420746 FGFR2P21802 821 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 CYP2C19P33261 490 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 PPIGQ13427 754 aaKnown RBP eCLIP11.33□□□□□ -0.69e-8■□□□□ 10.3
TRIM39-206ENST00000420746 MTMR2Q13614 643 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 LRRC41Q15345 812 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 PUM3Q15397 648 aaKnown RBP11.33□□□□□ -0.6
TRIM39-206ENST00000420746 BEND3Q5T5X7 828 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 OLFML2BQ68BL8 750 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 ANKRD33Q7Z3H0 272 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 PCGF6Q9BYE7 350 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRIM39-206ENST00000420746 DDX4Q9NQI0 724 aaKnown RBP11.33□□□□□ -0.6
TRIM39-206ENST00000420746 TMEM39AQ9NV64 488 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 TCF20Q9UGU0 1960 aaKnown RBP11.33□□□□□ -0.6
TRIM39-206ENST00000420746 TRANK1O15050 2925 aa11.33□□□□□ -0.6
TRIM39-206ENST00000420746 TIMP1P01033 207 aa11.32□□□□□ -0.6
TRIM39-206ENST00000420746 TMEM240Q5SV17 173 aa11.32□□□□□ -0.6
TRIM39-206ENST00000420746 MFSD5Q6N075 450 aa11.32□□□□□ -0.6
TRIM39-206ENST00000420746 SLC44A5Q8NCS7 719 aa11.32□□□□□ -0.6
TRIM39-206ENST00000420746 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRIM39-206ENST00000420746 FAM163AQ96GL9 167 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-206ENST00000420746 SLC28A3Q9HAS3 691 aa11.32□□□□□ -0.6
TRIM39-206ENST00000420746 IVNS1ABPQ9Y6Y0 642 aa11.32□□□□□ -0.6
TRIM39-206ENST00000420746 GRXCR1A8MXD5 290 aa11.31□□□□□ -0.6
TRIM39-206ENST00000420746 PSRC1Q6PGN9 363 aaPredicted RBP11.31□□□□□ -0.6
TRIM39-206ENST00000420746 SLF2Q8IX21 1173 aa11.31□□□□□ -0.6
TRIM39-206ENST00000420746 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
TRIM39-206ENST00000420746 NPLOC4Q8TAT6 608 aa11.31□□□□□ -0.6
TRIM39-206ENST00000420746 PAGR1Q9BTK6 254 aa11.31□□□□□ -0.6
TRIM39-206ENST00000420746 GINM1Q9NU53 330 aa11.31□□□□□ -0.6
TRIM39-206ENST00000420746 HERC5Q9UII4 1024 aaKnown RBP11.31□□□□□ -0.6
TRIM39-206ENST00000420746 ZNF521Q96K83 1311 aa11.31□□□□□ -0.6
TRIM39-206ENST00000420746 LRRC37A2A6NM11 1700 aa11.3□□□□□ -0.6
TRIM39-206ENST00000420746 WDFY4Q6ZS81 3184 aa11.3□□□□□ -0.6
TRIM39-206ENST00000420746 USP17L10C9JJH3 530 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms