RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 CEP290O15078 2479 aa25.87■■□□□ 1.73
PTPN4-202ENST00000420482 MAGEB6P1A0A0J9YX57 407 aa25.87■■□□□ 1.73
PTPN4-202ENST00000420482 C19orf81C9J6K1 198 aa25.87■■□□□ 1.73
PTPN4-202ENST00000420482 BACE1P56817 501 aa25.87■■□□□ 1.73
PTPN4-202ENST00000420482 RRP1BQ14684 758 aaKnown RBP25.87■■□□□ 1.73
PTPN4-202ENST00000420482 SLC9C2Q5TAH2 1124 aa25.87■■□□□ 1.73
PTPN4-202ENST00000420482 SLAIN1Q8ND83 568 aa25.87■■□□□ 1.73
PTPN4-202ENST00000420482 COA7Q96BR5 231 aa25.87■■□□□ 1.73
PTPN4-202ENST00000420482 DNAJC2Q99543 621 aaKnown RBP25.87■■□□□ 1.73
PTPN4-202ENST00000420482 SERPINB13Q9UIV8 391 aa25.87■■□□□ 1.73
PTPN4-202ENST00000420482 LOC285556D6RIA3 1793 aa25.87■■□□□ 1.73
PTPN4-202ENST00000420482 USP17L10C9JJH3 530 aa25.86■■□□□ 1.73
PTPN4-202ENST00000420482 PRKCZQ05513 592 aa25.86■■□□□ 1.73
PTPN4-202ENST00000420482 HABP4Q5JVS0 413 aaKnown RBP25.86■■□□□ 1.73
PTPN4-202ENST00000420482 ANKRD13CQ8N6S4 541 aa25.86■■□□□ 1.73
PTPN4-202ENST00000420482 NKX2-3Q8TAU0 364 aa25.86■■□□□ 1.73
PTPN4-202ENST00000420482 CRNKL1Q9BZJ0 848 aaKnown RBP25.86■■□□□ 1.73
PTPN4-202ENST00000420482 EHD4Q9H223 541 aa25.86■■□□□ 1.73
PTPN4-202ENST00000420482 SIPA1L1O43166 1804 aa25.86■■□□□ 1.73
PTPN4-202ENST00000420482 GOLIM4O00461 696 aa25.85■■□□□ 1.73
PTPN4-202ENST00000420482 IRX3P78415 501 aaPredicted RBP25.85■■□□□ 1.73
PTPN4-202ENST00000420482 MTMR2Q13614 643 aa25.85■■□□□ 1.73
PTPN4-202ENST00000420482 DNAJC18Q9H819 358 aa25.85■■□□□ 1.73
PTPN4-202ENST00000420482 ZBTB21Q9ULJ3 1066 aa25.85■■□□□ 1.73
PTPN4-202ENST00000420482 GDF11O95390 407 aa25.84■■□□□ 1.73
PTPN4-202ENST00000420482 PDE6AP16499 860 aa25.84■■□□□ 1.73
PTPN4-202ENST00000420482 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.84■■□□□ 1.73
PTPN4-202ENST00000420482 MYH1P12882 1939 aa25.84■■□□□ 1.73
PTPN4-202ENST00000420482 RIOK1Q9BRS2 568 aaKnown RBP25.83■■□□□ 1.73
PTPN4-202ENST00000420482 LRRCC1Q9C099 1032 aa25.83■■□□□ 1.73
PTPN4-202ENST00000420482 ASCC2Q9H1I8 757 aaPredicted RBP25.83■■□□□ 1.73
PTPN4-202ENST00000420482 POLR3DP05423 398 aaPredicted RBP25.82■■□□□ 1.72
PTPN4-202ENST00000420482 CABP5Q9NP86 173 aa25.82■■□□□ 1.72
PTPN4-202ENST00000420482 PAG1Q9NWQ8 432 aa25.82■■□□□ 1.72
PTPN4-202ENST00000420482 ZNF532Q9HCE3 1301 aa25.82■■□□□ 1.72
PTPN4-202ENST00000420482 ADCY3O60266 1144 aa25.81■■□□□ 1.72
PTPN4-202ENST00000420482 ATP5JP18859 108 aa25.81■■□□□ 1.72
PTPN4-202ENST00000420482 HOXA7P31268 230 aaPredicted RBP25.81■■□□□ 1.72
PTPN4-202ENST00000420482 FLT3LGP49771 235 aa25.81■■□□□ 1.72
PTPN4-202ENST00000420482 IRF5Q13568 498 aa25.81■■□□□ 1.72
PTPN4-202ENST00000420482 TATDN1Q6P1N9 297 aa25.81■■□□□ 1.72
PTPN4-202ENST00000420482 PXYLP1Q8TE99 480 aa25.81■■□□□ 1.72
PTPN4-202ENST00000420482 GABRQQ9UN88 632 aa25.81■■□□□ 1.72
PTPN4-202ENST00000420482 GH2P01242 217 aa25.8■■□□□ 1.72
PTPN4-202ENST00000420482 CERKLQ49MI3 558 aaPredicted RBP25.8■■□□□ 1.72
PTPN4-202ENST00000420482 USP17L2Q6R6M4 530 aa25.8■■□□□ 1.72
PTPN4-202ENST00000420482 FEZ1Q99689 392 aa25.8■■□□□ 1.72
PTPN4-202ENST00000420482 RNF208Q9H0X6 261 aa25.8■■□□□ 1.72
PTPN4-202ENST00000420482 MTFR1Q15390 333 aa25.79■■□□□ 1.72
PTPN4-202ENST00000420482 C20orf194Q5TEA3 1177 aa25.79■■□□□ 1.72
PTPN4-202ENST00000420482 GTF3C2Q8WUA4 911 aaPredicted RBP25.79■■□□□ 1.72
PTPN4-202ENST00000420482 BOLA2Q9H3K6 86 aa25.79■■□□□ 1.72
PTPN4-202ENST00000420482 CCL5P13501 91 aa25.78■■□□□ 1.72
PTPN4-202ENST00000420482 CAPN2P17655 700 aa25.78■■□□□ 1.72
PTPN4-202ENST00000420482 USP14P54578 494 aa25.78■■□□□ 1.72
PTPN4-202ENST00000420482 ABCB5Q2M3G0 1257 aa25.78■■□□□ 1.72
PTPN4-202ENST00000420482 ZSCAN25Q6NSZ9 544 aa25.78■■□□□ 1.72
PTPN4-202ENST00000420482 MCM9Q9NXL9 1143 aa25.78■■□□□ 1.72
PTPN4-202ENST00000420482 TAOK2Q9UL54 1235 aa25.78■■□□□ 1.72
PTPN4-202ENST00000420482 GJB1P08034 283 aa25.77■■□□□ 1.72
PTPN4-202ENST00000420482 JAG1P78504 1218 aa25.77■■□□□ 1.72
PTPN4-202ENST00000420482 RAB3GAP1Q15042 981 aa25.77■■□□□ 1.72
PTPN4-202ENST00000420482 AMOTL1Q8IY63 956 aa25.77■■□□□ 1.72
PTPN4-202ENST00000420482 HAUS7Q99871 368 aa25.77■■□□□ 1.72
PTPN4-202ENST00000420482 MORF4L1Q9UBU8 362 aa25.77■■□□□ 1.72
PTPN4-202ENST00000420482 GJA8P48165 433 aa25.76■■□□□ 1.71
PTPN4-202ENST00000420482 CCAR1Q8IX12 1150 aaKnown RBP25.76■■□□□ 1.71
PTPN4-202ENST00000420482 SHISA4Q96DD7 197 aa25.76■■□□□ 1.71
PTPN4-202ENST00000420482 DDRGK1Q96HY6 314 aa25.76■■□□□ 1.71
PTPN4-202ENST00000420482 GPATCH3Q96I76 525 aa25.76■■□□□ 1.71
PTPN4-202ENST00000420482 NAV1Q8NEY1 1877 aa25.75■■□□□ 1.71
PTPN4-202ENST00000420482 TCRBV5S4A2TA0A5A2 114 aa25.75■■□□□ 1.71
PTPN4-202ENST00000420482 PLCD1P51178 756 aa25.75■■□□□ 1.71
PTPN4-202ENST00000420482 HERVK_113P62684 666 aa25.75■■□□□ 1.71
PTPN4-202ENST00000420482 GPRC5AQ8NFJ5 357 aa25.75■■□□□ 1.71
PTPN4-202ENST00000420482 ATP8A2Q9NTI2 1148 aa25.75■■□□□ 1.71
PTPN4-202ENST00000420482 DOCK3Q8IZD9 2030 aa25.75■■□□□ 1.71
PTPN4-202ENST00000420482 ADD2P35612 726 aa25.74■■□□□ 1.71
PTPN4-202ENST00000420482 SHROOM1Q2M3G4 852 aaPredicted RBP25.74■■□□□ 1.71
PTPN4-202ENST00000420482 P2RX7Q99572 595 aaKnown RBP25.74■■□□□ 1.71
PTPN4-202ENST00000420482 TRIOBPQ9H2D6 2365 aa25.73■■□□□ 1.71
PTPN4-202ENST00000420482 INHAP05111 366 aa25.73■■□□□ 1.71
PTPN4-202ENST00000420482 ELNP15502 786 aa25.73■■□□□ 1.71
PTPN4-202ENST00000420482 LCORLQ8N3X6 602 aa25.73■■□□□ 1.71
PTPN4-202ENST00000420482 SDR42E1Q8WUS8 393 aa25.73■■□□□ 1.71
PTPN4-202ENST00000420482 EDC3Q96F86 508 aaKnown RBP25.73■■□□□ 1.71
PTPN4-202ENST00000420482 C12orf42Q96LP6 360 aa25.73■■□□□ 1.71
PTPN4-202ENST00000420482 KIAA1683Q9H0B3 1180 aa25.73■■□□□ 1.71
PTPN4-202ENST00000420482 DCP1AQ9NPI6 582 aaPredicted RBP25.73■■□□□ 1.71
PTPN4-202ENST00000420482 SWAP70Q9UH65 585 aa25.73■■□□□ 1.71
PTPN4-202ENST00000420482 DDX60LQ5H9U9 1706 aaKnown RBP25.72■■□□□ 1.71
PTPN4-202ENST00000420482 USP17L15C9J2P7 530 aa25.72■■□□□ 1.71
PTPN4-202ENST00000420482 USP17L13C9JLJ4 530 aa25.72■■□□□ 1.71
PTPN4-202ENST00000420482 USP17L11C9JVI0 530 aa25.72■■□□□ 1.71
PTPN4-202ENST00000420482 USP17L18D6R9N7 530 aa25.72■■□□□ 1.71
PTPN4-202ENST00000420482 USP17L22D6RA61 530 aa25.72■■□□□ 1.71
PTPN4-202ENST00000420482 USP17L17D6RBQ6 530 aa25.72■■□□□ 1.71
PTPN4-202ENST00000420482 USP17L19D6RCP7 530 aa25.72■■□□□ 1.71
PTPN4-202ENST00000420482 USP17L20D6RJB6 530 aa25.72■■□□□ 1.71
PTPN4-202ENST00000420482 SHMT1P34896 483 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms