RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 MCM9Q9NXL9 1143 aa9.46□□□□□ -0.89
COL12A1-204ENST00000419671 CFAP45Q9UL16 551 aa9.46□□□□□ -0.89
COL12A1-204ENST00000419671 KIF13BQ9NQT8 1826 aa9.46□□□□□ -0.89
COL12A1-204ENST00000419671 BAZ2BQ9UIF8 2168 aaKnown RBP9.46□□□□□ -0.89
COL12A1-204ENST00000419671 GPR75-ASB3A0A0A6YYF3 556 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 KIF28PB7ZC32 967 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 GAKO14976 1311 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 BAG3O95817 575 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 LDHCP07864 332 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 IFNAR1P17181 557 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 IARSP41252 1262 aaKnown RBP9.46□□□□□ -0.9
COL12A1-204ENST00000419671 BTDP43251 543 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 USP5P45974 858 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 RCAN1P53805 252 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 GTF2IP78347 998 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 CCDC183Q5T5S1 534 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 CPLX2Q6PUV4 134 aaKnown RBP9.46□□□□□ -0.9
COL12A1-204ENST00000419671 DPP8Q6V1X1 898 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-204ENST00000419671 SYNE3Q6ZMZ3 975 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 RGS22Q8NE09 1264 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 TBC1D22AQ8WUA7 517 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 TGFBRAP1Q8WUH2 860 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 ZNF622Q969S3 477 aaKnown RBP eCLIP9.46□□□□□ -0.9
COL12A1-204ENST00000419671 FAM163AQ96GL9 167 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-204ENST00000419671 ALG1Q9BT22 464 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 ZC3H12CQ9C0D7 883 aaKnown RBP9.46□□□□□ -0.9
COL12A1-204ENST00000419671 PDGFDQ9GZP0 370 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-204ENST00000419671 RBSNQ9H1K0 784 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 STK36Q9NRP7 1315 aa9.46□□□□□ -0.9
COL12A1-204ENST00000419671 SNED1Q8TER0 1413 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 NMT2O60551 498 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-204ENST00000419671 LIG1P18858 919 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 RHBDL3P58872 404 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 CEBPZQ03701 1054 aaKnown RBP9.45□□□□□ -0.9
COL12A1-204ENST00000419671 RTN1Q16799 776 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 IQCA1Q86XH1 822 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 C2CD5Q86YS7 1000 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 CMTR1Q8N1G2 835 aaKnown RBP9.45□□□□□ -0.9
COL12A1-204ENST00000419671 CERS5Q8N5B7 392 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 FANCBQ8NB91 859 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 SLC26A6Q9BXS9 759 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 RCOR1Q9UKL0 485 aa9.45□□□□□ -0.9
COL12A1-204ENST00000419671 POLR3DP05423 398 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-204ENST00000419671 CHRNA5P30532 468 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 GUCY1A2P33402 732 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 PLCD1P51178 756 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 KIF23Q02241 960 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-204ENST00000419671 PDE4BQ07343 736 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 TROAPQ12815 778 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 DOK7Q18PE1 504 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 FAM47AQ5JRC9 791 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 IFIT1BQ5T764 474 aaKnown RBP9.44□□□□□ -0.9
COL12A1-204ENST00000419671 ATL3Q6DD88 541 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 STYK1Q6J9G0 422 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 NUP133Q8WUM0 1156 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 DYNLL2Q96FJ2 89 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 STK32BQ9NY57 414 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 FLT1P17948 1338 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 H0YIN7 160 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 SLC3A2P08195 630 aaKnown RBP9.44□□□□□ -0.9
COL12A1-204ENST00000419671 SSRP1Q08945 709 aaKnown RBP9.44□□□□□ -0.9
COL12A1-204ENST00000419671 KRT40Q6A162 431 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 RCSD1Q6JBY9 416 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 DEFB132Q7Z7B7 95 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 CERS3Q8IU89 383 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 MAPKAPK5Q8IW41 473 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 CRACR2BQ8N4Y2 399 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-204ENST00000419671 NOL10Q9BSC4 688 aaKnown RBP9.44□□□□□ -0.9
COL12A1-204ENST00000419671 MXD3Q9BW11 206 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 SIPA1L1O43166 1804 aa9.44□□□□□ -0.9
COL12A1-204ENST00000419671 CCDC196A0A1B0GTZ2 297 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 TSPY2A6NKD2 308 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 NASPP49321 788 aaPredicted RBP9.43□□□□□ -0.9
COL12A1-204ENST00000419671 FUT2Q10981 343 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 BRAPQ7Z569 592 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 TEX11Q8IYF3 940 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 CCDC82Q8N4S0 544 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 FBXO41Q8TF61 875 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 SECISBP2LQ93073 1101 aaKnown RBP9.43□□□□□ -0.9
COL12A1-204ENST00000419671 ZNF396Q96N95 335 aaPredicted RBP9.43□□□□□ -0.9
COL12A1-204ENST00000419671 FUCA2Q9BTY2 467 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 IL17RBQ9NRM6 502 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 RTEL1Q9NZ71 1219 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 SAP30BPQ9UHR5 308 aaKnown RBP9.43□□□□□ -0.9
COL12A1-204ENST00000419671 SUGT1Q9Y2Z0 365 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 DAGLAQ9Y4D2 1042 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 CLIC4Q9Y696 253 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 MYH4Q9Y623 1939 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 NR1I2O75469 434 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 PPP1R37O75864 691 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 PLCG2P16885 1265 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 U2AF2P26368 475 aaKnown RBP eCLIP9.43□□□□□ -0.9
COL12A1-204ENST00000419671 PPP2R5BQ15173 497 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 CATIPQ7Z7H3 387 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 SLC44A5Q8NCS7 719 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 C7orf43Q8WVR3 580 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 KCNQ5Q9NR82 932 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms