RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DDX46Q7L014 1031 aaKnown RBP8.81□□□□□ -1
HMGN1-205ENST00000419378 GRAPLQ8TC17 118 aaPredicted RBP8.81□□□□□ -1
HMGN1-205ENST00000419378 RHBDD1Q8TEB9 315 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 PSMD1Q99460 953 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.81□□□□□ -11e-9■■■■■ 62.2
HMGN1-205ENST00000419378 EGFL7Q9UHF1 273 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 HCN4Q9Y3Q4 1203 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 ATP6V0A2Q9Y487 856 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 TAF1P21675 1872 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 GLTPD2A6NH11 291 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 NEURL1BA8MQ27 555 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 H3BRB1 525 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 ICMTO60725 284 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 BBOX1O75936 387 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 HSP90B1P14625 803 aaKnown RBP8.8□□□□□ -1
HMGN1-205ENST00000419378 IARSP41252 1262 aaKnown RBP8.8□□□□□ -1
HMGN1-205ENST00000419378 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
HMGN1-205ENST00000419378 SLFN5Q08AF3 891 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 SCARF1Q14162 830 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 CTC1Q2NKJ3 1217 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 CWF19L2Q2TBE0 894 aaKnown RBP8.8□□□□□ -1
HMGN1-205ENST00000419378 TRIM46Q7Z4K8 759 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 JARID2Q92833 1246 aaPredicted RBP8.8□□□□□ -1
HMGN1-205ENST00000419378 TUT1Q9H6E5 874 aaKnown RBP8.8□□□□□ -1
HMGN1-205ENST00000419378 COL4A5P29400 1685 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 WDR90Q96KV7 1748 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 CDHR2Q9BYE9 1310 aa8.8□□□□□ -1
HMGN1-205ENST00000419378 DUOX1Q9NRD9 1551 aa8.79□□□□□ -1
HMGN1-205ENST00000419378 AXIN1O15169 862 aa8.79□□□□□ -1
HMGN1-205ENST00000419378 PLA2G4AP47712 749 aa8.79□□□□□ -1
HMGN1-205ENST00000419378 HIRAP54198 1017 aaPredicted RBP8.79□□□□□ -1
HMGN1-205ENST00000419378 C4orf17Q53FE4 359 aa8.79□□□□□ -1
HMGN1-205ENST00000419378 C16orf46Q6P387 395 aa8.79□□□□□ -1
HMGN1-205ENST00000419378 PRICKLE2Q7Z3G6 844 aa8.79□□□□□ -1
HMGN1-205ENST00000419378 RNF217Q8TC41 542 aa8.79□□□□□ -1
HMGN1-205ENST00000419378 HELQQ8TDG4 1101 aa8.79□□□□□ -1
HMGN1-205ENST00000419378 DNAAF4Q8WXU2 420 aa8.79□□□□□ -1
HMGN1-205ENST00000419378 CELF1Q92879 486 aaKnown RBP8.79□□□□□ -1
HMGN1-205ENST00000419378 BIN2Q9UBW5 565 aaPredicted RBP8.79□□□□□ -1
HMGN1-205ENST00000419378 ZNF541Q9H0D2 1346 aa8.79□□□□□ -1
HMGN1-205ENST00000419378 F6X3S4 739 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 PDE8AO60658 829 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 TOMM70O94826 608 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 PHKA2P46019 1235 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 POU4F2Q12837 409 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 GCKRQ14397 625 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 COX20Q5RI15 118 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 DPP8Q6V1X1 898 aaPredicted RBP8.78□□□□□ -1
HMGN1-205ENST00000419378 TMC4Q7Z404 712 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 GLYCTKQ8IVS8 523 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 SP8Q8IXZ3 490 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 LINS1Q8NG48 757 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 RTFDC1Q9BY42 306 aaPredicted RBP8.78□□□□□ -1
HMGN1-205ENST00000419378 TMX4Q9H1E5 349 aaPredicted RBP8.78□□□□□ -1
HMGN1-205ENST00000419378 RRAGCQ9HB90 399 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 MYH3P11055 1940 aa8.78□□□□□ -1
HMGN1-205ENST00000419378 LTBP1Q14766 1721 aa8.77□□□□□ -1
HMGN1-205ENST00000419378 TTLL8A6PVC2 850 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 SPATA31C2B4DYI2 1134 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 H7C1W4 665 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 DDNO94850 711 aaPredicted RBP8.77□□□□□ -1.01
HMGN1-205ENST00000419378 TXLNAP40222 546 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 CASP7P55210 303 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 CTSWP56202 376 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 CCDC152Q4G0S7 254 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 LYSMD3Q7Z3D4 306 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 UBE3BQ7Z3V4 1068 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 TRMT2AQ8IZ69 625 aaKnown RBP8.77□□□□□ -1.01
HMGN1-205ENST00000419378 ALDH16A1Q8IZ83 802 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 ZFP42Q96MM3 310 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 PHACTR1Q9C0D0 580 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 SEC31BQ9NQW1 1179 aa8.77□□□□□ -1.01
HMGN1-205ENST00000419378 FIGNL2A6NMB9 653 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 FZD9O00144 591 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 ST8SIA5O15466 376 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 PPIP5K2O43314 1243 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 VEGFAP15692 232 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-205ENST00000419378 RPS8P62241 208 aaKnown RBP8.76□□□□□ -1.01
HMGN1-205ENST00000419378 AOC3Q16853 763 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 BEND3Q5T5X7 828 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 C16orf71Q8IYS4 520 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-205ENST00000419378 CRIPAKQ8N1N5 446 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 SUPT20HQ8NEM7 779 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 JDP2Q8WYK2 163 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 SSH1Q8WYL5 1049 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 AIDAQ96BJ3 306 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 LRFN2Q9ULH4 789 aa8.76□□□□□ -1.01
HMGN1-205ENST00000419378 RTL9Q8NET4 1388 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 POTECB2RU33 542 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 RHOQP17081 205 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 GPSM2P81274 684 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 KIAA2012Q0VF49 1180 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 LAPTM4AQ15012 233 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 ECM1Q16610 540 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 NIM1KQ8IY84 436 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 TTLL11Q8NHH1 800 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 MYO19Q96H55 970 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 PLA2G12BQ9BX93 195 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 BCL2L13Q9BXK5 485 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 VPS33BQ9H267 617 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms