RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 GABPAQ06546 454 aa24.48■■□□□ 1.51
GTF3A-202ENST00000419181 GADL1Q6ZQY3 521 aa24.48■■□□□ 1.51
GTF3A-202ENST00000419181 CD99L2Q8TCZ2 262 aa24.48■■□□□ 1.51
GTF3A-202ENST00000419181 AS3MTQ9HBK9 375 aa24.48■■□□□ 1.51
GTF3A-202ENST00000419181 SLC45A1Q9Y2W3 748 aa24.48■■□□□ 1.51
GTF3A-202ENST00000419181 RNF113AO15541 343 aaKnown RBP24.47■■□□□ 1.51
GTF3A-202ENST00000419181 ZFYP08048 801 aaPredicted RBP24.47■■□□□ 1.51
GTF3A-202ENST00000419181 OTOP1Q7RTM1 612 aa24.47■■□□□ 1.51
GTF3A-202ENST00000419181 APPBP2Q92624 585 aa24.47■■□□□ 1.51
GTF3A-202ENST00000419181 PARK7Q99497 189 aaKnown RBP24.47■■□□□ 1.51
GTF3A-202ENST00000419181 WDR18Q9BV38 432 aa24.47■■□□□ 1.51
GTF3A-202ENST00000419181 STAP2Q9UGK3 403 aa24.47■■□□□ 1.51
GTF3A-202ENST00000419181 SHMT1P34896 483 aa24.46■■□□□ 1.51
GTF3A-202ENST00000419181 CAP1Q01518 475 aa24.46■■□□□ 1.51
GTF3A-202ENST00000419181 EVX2Q03828 476 aa24.46■■□□□ 1.51
GTF3A-202ENST00000419181 C17orf99Q6UX52 265 aa24.46■■□□□ 1.51
GTF3A-202ENST00000419181 PROCA1Q8NCQ7 364 aaPredicted RBP24.46■■□□□ 1.51
GTF3A-202ENST00000419181 AGTPBP1Q9UPW5 1226 aa24.46■■□□□ 1.51
GTF3A-202ENST00000419181 SH3D19Q5HYK7 790 aa24.45■■□□□ 1.5
GTF3A-202ENST00000419181 FBXO46Q6PJ61 603 aaPredicted RBP24.45■■□□□ 1.5
GTF3A-202ENST00000419181 OSBP2Q969R2 916 aa24.45■■□□□ 1.5
GTF3A-202ENST00000419181 TRIM17Q9Y577 477 aa24.45■■□□□ 1.5
GTF3A-202ENST00000419181 SLC4A4Q9Y6R1 1079 aa24.45■■□□□ 1.5
GTF3A-202ENST00000419181 HTTP42858 3142 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 GH2P01242 217 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 CYP2C8P10632 490 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 CYP2D6P10635 497 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 PDE1AP54750 535 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 HMGCS2P54868 508 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 LRRFIP1Q32MZ4 808 aaKnown RBP24.44■■□□□ 1.5
GTF3A-202ENST00000419181 CERKLQ49MI3 558 aaPredicted RBP24.44■■□□□ 1.5
GTF3A-202ENST00000419181 STRBPQ96SI9 672 aaKnown RBP24.44■■□□□ 1.5
GTF3A-202ENST00000419181 LNPKQ9C0E8 428 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 CPA4Q9UI42 421 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 TAOK2Q9UL54 1235 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 HPS5Q9UPZ3 1129 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 ZSWIM8A7E2V4 1837 aa24.44■■□□□ 1.5
GTF3A-202ENST00000419181 BACE1P56817 501 aa24.43■■□□□ 1.5
GTF3A-202ENST00000419181 MTMR2Q13614 643 aa24.43■■□□□ 1.5
GTF3A-202ENST00000419181 TREML2Q5T2D2 321 aa24.43■■□□□ 1.5
GTF3A-202ENST00000419181 EFCC1Q9HA90 598 aa24.43■■□□□ 1.5
GTF3A-202ENST00000419181 MYH8P13535 1937 aa24.43■■□□□ 1.5
GTF3A-202ENST00000419181 LACTBP83111 547 aaPredicted RBP24.42■■□□□ 1.5
GTF3A-202ENST00000419181 DDRGK1Q96HY6 314 aa24.42■■□□□ 1.5
GTF3A-202ENST00000419181 FSD1Q9BTV5 496 aa24.42■■□□□ 1.5
GTF3A-202ENST00000419181 IRX6P78412 446 aaPredicted RBP24.41■■□□□ 1.5
GTF3A-202ENST00000419181 ABCB5Q2M3G0 1257 aa24.41■■□□□ 1.5
GTF3A-202ENST00000419181 C12orf60Q5U649 245 aa24.41■■□□□ 1.5
GTF3A-202ENST00000419181 B4GALNT3Q6L9W6 998 aa24.41■■□□□ 1.5
GTF3A-202ENST00000419181 SWAP70Q9UH65 585 aa24.41■■□□□ 1.5
GTF3A-202ENST00000419181 C19orf81C9J6K1 198 aa24.4■■□□□ 1.5
GTF3A-202ENST00000419181 USP17L10C9JJH3 530 aa24.4■■□□□ 1.5
GTF3A-202ENST00000419181 USP17L12C9JPN9 530 aa24.4■■□□□ 1.5
GTF3A-202ENST00000419181 USP17L21D6R901 530 aa24.4■■□□□ 1.5
GTF3A-202ENST00000419181 M0R2C6 588 aa24.4■■□□□ 1.5
GTF3A-202ENST00000419181 GPAA1O43292 621 aa24.4■■□□□ 1.5
GTF3A-202ENST00000419181 BCRP11274 1271 aa24.4■■□□□ 1.5
GTF3A-202ENST00000419181 NUCB1Q02818 461 aa24.4■■□□□ 1.5
GTF3A-202ENST00000419181 CHD1LQ86WJ1 897 aa24.4■■□□□ 1.5
GTF3A-202ENST00000419181 SLC44A5Q8NCS7 719 aa24.4■■□□□ 1.5
GTF3A-202ENST00000419181 CYP2D7A0A087X1C5 515 aa24.39■■□□□ 1.49
GTF3A-202ENST00000419181 GSG1L2A8MUP6 293 aa24.39■■□□□ 1.49
GTF3A-202ENST00000419181 ARHGEF6Q15052 776 aa24.39■■□□□ 1.49
GTF3A-202ENST00000419181 CTR9Q6PD62 1173 aa24.39■■□□□ 1.49
GTF3A-202ENST00000419181 AMOTL1Q8IY63 956 aa24.39■■□□□ 1.49
GTF3A-202ENST00000419181 DYNLL2Q96FJ2 89 aa24.39■■□□□ 1.49
GTF3A-202ENST00000419181 ARHGAP39Q9C0H5 1083 aa24.39■■□□□ 1.49
GTF3A-202ENST00000419181 CABP5Q9NP86 173 aa24.39■■□□□ 1.49
GTF3A-202ENST00000419181 PNMA3Q9UL41 463 aa24.39■■□□□ 1.49
GTF3A-202ENST00000419181 PTPN22Q9Y2R2 807 aa24.39■■□□□ 1.49
GTF3A-202ENST00000419181 SMIM22K7EJ46 135 aa24.38■■□□□ 1.49
GTF3A-202ENST00000419181 GUCY1A2P33402 732 aa24.38■■□□□ 1.49
GTF3A-202ENST00000419181 SOX10P56693 466 aa24.38■■□□□ 1.49
GTF3A-202ENST00000419181 KIF22Q14807 665 aa24.38■■□□□ 1.49
GTF3A-202ENST00000419181 RAB3GAP1Q15042 981 aa24.38■■□□□ 1.49
GTF3A-202ENST00000419181 ZMYM1Q5SVZ6 1142 aa24.38■■□□□ 1.49
GTF3A-202ENST00000419181 GIMAP6Q6P9H5 292 aa24.38■■□□□ 1.49
GTF3A-202ENST00000419181 SMCR8Q8TEV9 937 aaPredicted RBP24.38■■□□□ 1.49
GTF3A-202ENST00000419181 EVI5LQ96CN4 794 aa24.38■■□□□ 1.49
GTF3A-202ENST00000419181 TMOD4Q9NZQ9 345 aa24.38■■□□□ 1.49
GTF3A-202ENST00000419181 ARPP21Q9UBL0 812 aaPredicted RBP24.38■■□□□ 1.49
GTF3A-202ENST00000419181 GNAT2P19087 354 aa24.37■■□□□ 1.49
GTF3A-202ENST00000419181 RGS19P49795 217 aa24.37■■□□□ 1.49
GTF3A-202ENST00000419181 MLLT1Q03111 559 aaPredicted RBP24.37■■□□□ 1.49
GTF3A-202ENST00000419181 PABPC4Q13310 644 aaKnown RBP eCLIP24.37■■□□□ 1.493e-8■■■■□ 24.1
GTF3A-202ENST00000419181 SEC62Q99442 399 aaKnown RBP24.37■■□□□ 1.49
GTF3A-202ENST00000419181 MGAMO43451 1857 aa24.36■■□□□ 1.49
GTF3A-202ENST00000419181 CTGFP29279 349 aa24.36■■□□□ 1.49
GTF3A-202ENST00000419181 SBK1Q52WX2 424 aa24.36■■□□□ 1.49
GTF3A-202ENST00000419181 C16orf86Q6ZW13 317 aa24.36■■□□□ 1.49
GTF3A-202ENST00000419181 EPB41L4AQ9HCS5 686 aaPredicted RBP24.36■■□□□ 1.49
GTF3A-202ENST00000419181 EMILIN3Q9NT22 766 aa24.36■■□□□ 1.49
GTF3A-202ENST00000419181 GNRH1P01148 92 aa24.35■■□□□ 1.49
GTF3A-202ENST00000419181 HOXA7P31268 230 aaPredicted RBP24.35■■□□□ 1.49
GTF3A-202ENST00000419181 CDK8P49336 464 aa24.35■■□□□ 1.49
GTF3A-202ENST00000419181 SEPT2Q15019 361 aa24.35■■□□□ 1.49
GTF3A-202ENST00000419181 PLEKHM2Q8IWE5 1019 aa24.35■■□□□ 1.49
GTF3A-202ENST00000419181 ASCC2Q9H1I8 757 aaPredicted RBP24.35■■□□□ 1.49
GTF3A-202ENST00000419181 MPHOSPH10O00566 681 aaKnown RBP24.34■■□□□ 1.49
GTF3A-202ENST00000419181 USP17L2Q6R6M4 530 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms