RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 GSPT2Q8IYD1 628 aaKnown RBP15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 PARD6BQ9BYG5 372 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 SAP30BPQ9UHR5 308 aaKnown RBP15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 TRIM49BA6NDI0 452 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 MARCH6O60337 910 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 TSR1Q2NL82 804 aaKnown RBP15□□□□□ -0.01
TNFRSF8-203ENST00000417814 SPECC1LQ69YQ0 1117 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 NCAPH2Q6IBW4 605 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 LRP10Q7Z4F1 713 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 SLC51AQ86UW1 340 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 ZBTB38Q8NAP3 1195 aaPredicted RBP15□□□□□ -0.01
TNFRSF8-203ENST00000417814 FANCBQ8NB91 859 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 LY9Q9HBG7 655 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 HNRNPH2P55795 449 aaKnown RBP15□□□□□ -0.01
TNFRSF8-203ENST00000417814 ARID5AQ03989 594 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 RAD51AP2Q09MP3 1159 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 SOS2Q07890 1332 aaPredicted RBP15□□□□□ -0.01
TNFRSF8-203ENST00000417814 UBXN1Q04323 297 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 HDAC6Q9UBN7 1215 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 GDAQ9Y2T3 454 aa15□□□□□ -0.01
TNFRSF8-203ENST00000417814 PTGDRQ13258 359 aa14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 SMC1AQ14683 1233 aaKnown RBP14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 HPS3Q969F9 1004 aa14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 AKR1B15C9JRZ8 316 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 N4BP1O75113 896 aaKnown RBP14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 XBP1P17861 261 aa14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 RASGRP2Q7LDG7 609 aa14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 VSTM4Q8IW00 320 aa14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 PDE11AQ9HCR9 933 aa14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 TOB1P50616 345 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 SUSD4Q5VX71 490 aa14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 CATIPQ7Z7H3 387 aa14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 SLC35F6Q8N357 371 aa14.99□□□□□ -0.01
TNFRSF8-203ENST00000417814 PCDH11XQ9BZA7 1347 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 PCDH11YQ9BZA8 1340 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 CUTAO60888 179 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 IDEP14735 1019 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 CCDC178Q5BJE1 867 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 HEATR3Q7Z4Q2 680 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 KIAA1328Q86T90 577 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 IGDCC4Q8TDY8 1250 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 TANGO6Q9C0B7 1094 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 CENPHQ9H3R5 247 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 TACC3Q9Y6A5 838 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 PATL2C9JE40 543 aaKnown RBP14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 F8W031 263 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 FANCGO15287 622 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 CCDC175P0C221 793 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 CDC25BP30305 580 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 KRT9P35527 623 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 IL17RAQ96F46 866 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 INTS13Q9NVM9 706 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 RIPOR2Q9Y4F9 1068 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 MAGEB6P1A0A0J9YX57 407 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 KIF2AO00139 706 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 CYP27A1Q02318 531 aa14.98□□□□□ -0.01
TNFRSF8-203ENST00000417814 EXOC5O00471 708 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 TTF1Q15361 905 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 HSP90B2PQ58FF3 399 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 CTCFLQ8NI51 663 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 JADE2Q9NQC1 790 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 RSPH14Q9UHP6 348 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 GSG1L2A8MUP6 293 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 CD44P16070 742 aaKnown RBP14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 CHMP4BP1P59074 171 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 PUM3Q15397 648 aaKnown RBP14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 IQCA1Q86XH1 822 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 OSBPL5Q9H0X9 879 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 BRMS1Q9HCU9 246 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 ATG3Q9NT62 314 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 MCM9Q9NXL9 1143 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 IMPACTQ9P2X3 320 aa14.97□□□□□ -0.01
TNFRSF8-203ENST00000417814 ARHGAP6O43182 974 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 PPARAQ07869 468 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 GIGYF2Q6Y7W6 1299 aaKnown RBP14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 ADGRA1Q86SQ6 560 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 CADPS2Q86UW7 1296 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 DYNLL2Q96FJ2 89 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 KANSL2Q9H9L4 492 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 PXDNLA1KZ92 1463 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 PIK3C2AO00443 1686 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 ANKARQ7Z5J8 1434 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 A0A087X0B3 334 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 PCCAP05165 728 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 PLA2G4AP47712 749 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 RAD9BQ6WBX8 426 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 NOC3LQ8WTT2 800 aaKnown RBP14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 TRIM47Q96LD4 638 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 FAM217BQ9NTX9 383 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 SYNRGQ9UMZ2 1314 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 CAPN2P17655 700 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 CXCR5P32302 372 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 GABPB1Q06547 395 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 PTPAQ15257 358 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 REXO1L1PQ8IX06 675 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 RIN2Q8WYP3 895 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 MKNK2Q9HBH9 465 aa14.96□□□□□ -0.01
TNFRSF8-203ENST00000417814 MON2Q7Z3U7 1717 aa14.96□□□□□ -0.02
TNFRSF8-203ENST00000417814 SASH3O75995 380 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 MMP1P03956 469 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms