RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 SERPINB6P35237 376 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 NMIQ13287 307 aaPredicted RBP11.4□□□□□ -0.58
SATB1-204ENST00000417717 HEATR3Q7Z4Q2 680 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 TRIML1Q8N9V2 468 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.59
SATB1-204ENST00000417717 ATP5HO75947 161 aa11.4□□□□□ -0.59
SATB1-204ENST00000417717 CORO7P57737 925 aa11.4□□□□□ -0.59
SATB1-204ENST00000417717 HAUS8Q9BT25 410 aa11.4□□□□□ -0.59
SATB1-204ENST00000417717 EIF2AK4Q9P2K8 1649 aaKnown RBP11.39□□□□□ -0.59
SATB1-204ENST00000417717 POGZQ7Z3K3 1410 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 SEC24BO95487 1268 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 IKQ13123 557 aaPredicted RBP11.39□□□□□ -0.59
SATB1-204ENST00000417717 PRPF38AQ8NAV1 312 aaKnown RBP11.39□□□□□ -0.59
SATB1-204ENST00000417717 TBC1D23Q9NUY8 699 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 MAST1Q9Y2H9 1570 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 LRRIQ3A6PVS8 624 aaPredicted RBP11.39□□□□□ -0.59
SATB1-204ENST00000417717 PDHA1P08559 390 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 ERCC5P28715 1186 aaPredicted RBP11.39□□□□□ -0.59
SATB1-204ENST00000417717 CDC25BP30305 580 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 INPP1P49441 399 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 CCDC15Q0P6D6 951 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 SFSWAPQ12872 951 aaKnown RBP11.39□□□□□ -0.59
SATB1-204ENST00000417717 KRT80Q6KB66 452 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 SYCP3Q8IZU3 236 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 THOC1Q96FV9 657 aaKnown RBP11.39□□□□□ -0.59
SATB1-204ENST00000417717 TXNDC16Q9P2K2 825 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 MYO1AQ9UBC5 1043 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 SHROOM2Q13796 1616 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 G3V3G9 751 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 CSB-PGBD3P0DP91 1061 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 KRT4P19013 534 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 SNX1Q13596 522 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 SEL1L2Q5TEA6 688 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 ARHGAP22Q7Z5H3 698 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 TBC1D22AQ8WUA7 517 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 MAML3Q96JK9 1138 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 KIF9Q9HAQ2 790 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 ATP6V0A2Q9Y487 856 aa11.39□□□□□ -0.59
SATB1-204ENST00000417717 KDM5DQ9BY66 1539 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 HARSP12081 509 aaKnown RBP11.38□□□□□ -0.59
SATB1-204ENST00000417717 KRT10P13645 584 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 LMNB1P20700 586 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 TMEM266Q2M3C6 531 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 TRIM42Q8IWZ5 723 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 LEO1Q8WVC0 666 aaPredicted RBP11.38□□□□□ -0.59
SATB1-204ENST00000417717 MRPL46Q9H2W6 279 aaKnown RBP11.38□□□□□ -0.59
SATB1-204ENST00000417717 SF3A3Q12874 501 aaKnown RBP eCLIP11.38□□□□□ -0.59
SATB1-204ENST00000417717 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 TTC5Q8N0Z6 440 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 KIFAP3Q92845 792 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 NUP58Q9BVL2 599 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 HAUS4Q9H6D7 363 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 ZNF148Q9UQR1 794 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 CTNND1O60716 968 aaKnown RBP11.38□□□□□ -0.59
SATB1-204ENST00000417717 RAPGEF3O95398 923 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 ESRRBO95718 433 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 KRT8P05787 483 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 NR1D1P20393 614 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 NANOGNBQ7Z5D8 188 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 KLHL23Q8NBE8 558 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 E9PMD0 336 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 KRT15P19012 456 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 IARSP41252 1262 aaKnown RBP11.38□□□□□ -0.59
SATB1-204ENST00000417717 C6orf118Q5T5N4 469 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 NBPF14Q5TI25 921 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 MYLK4Q86YV6 388 aaPredicted RBP11.38□□□□□ -0.59
SATB1-204ENST00000417717 ANKRD42Q8N9B4 389 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 SSH1Q8WYL5 1049 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 CALML4Q96GE6 196 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 RILPQ96NA2 401 aa11.38□□□□□ -0.59
SATB1-204ENST00000417717 LARP6Q9BRS8 491 aaKnown RBP11.38□□□□□ -0.59
SATB1-204ENST00000417717 MEFVO15553 781 aaPredicted RBP11.37□□□□□ -0.59
SATB1-204ENST00000417717 KCNA4P22459 653 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 SSRP1Q08945 709 aaKnown RBP11.37□□□□□ -0.59
SATB1-204ENST00000417717 KCTD16Q68DU8 428 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 PIP4K2CQ8TBX8 421 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 BRF1Q92994 677 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 DYDC2Q96IM9 177 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 TTC1Q99614 292 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 RHBDL2Q9NX52 303 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 RGL1Q9NZL6 768 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 DKK3Q9UBP4 350 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 ATP7AQ04656 1500 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 CC2D1AQ6P1N0 951 aaPredicted RBP11.37□□□□□ -0.59
SATB1-204ENST00000417717 NDC80O14777 642 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 STX10O60499 249 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 TADA3O75528 432 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 HNRNPH1P31943 449 aaKnown RBP11.37□□□□□ -0.59
SATB1-204ENST00000417717 PAPOLAP51003 745 aaKnown RBP11.37□□□□□ -0.59
SATB1-204ENST00000417717 MLKLQ8NB16 471 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 LRRC8CQ8TDW0 803 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 AIDAQ96BJ3 306 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 POLE3Q9NRF9 147 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 DDX28Q9NUL7 540 aaKnown RBP11.37□□□□□ -0.59
SATB1-204ENST00000417717 WWC3Q9ULE0 1092 aa11.37□□□□□ -0.59
SATB1-204ENST00000417717 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
SATB1-204ENST00000417717 SLFN14P0C7P3 912 aa11.36□□□□□ -0.59
SATB1-204ENST00000417717 SDSP20132 328 aa11.36□□□□□ -0.59
SATB1-204ENST00000417717 KRT9P35527 623 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms