RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 JAG1P78504 1218 aa30.72■■■□□ 2.51
VEGFA-208ENST00000417285 MTMR2Q13614 643 aa30.72■■■□□ 2.51
VEGFA-208ENST00000417285 NKX2-3Q8TAU0 364 aa30.72■■■□□ 2.51
VEGFA-208ENST00000417285 COA7Q96BR5 231 aa30.72■■■□□ 2.51
VEGFA-208ENST00000417285 RIOK1Q9BRS2 568 aaKnown RBP30.72■■■□□ 2.51
VEGFA-208ENST00000417285 ZBTB21Q9ULJ3 1066 aa30.72■■■□□ 2.51
VEGFA-208ENST00000417285 RBBP6Q7Z6E9 1792 aaKnown RBP30.71■■■□□ 2.51
VEGFA-208ENST00000417285 PDE6AP16499 860 aa30.71■■■□□ 2.51
VEGFA-208ENST00000417285 HOXA7P31268 230 aaPredicted RBP30.71■■■□□ 2.51
VEGFA-208ENST00000417285 TATDN1Q6P1N9 297 aa30.71■■■□□ 2.51
VEGFA-208ENST00000417285 GABRQQ9UN88 632 aa30.71■■■□□ 2.51
VEGFA-208ENST00000417285 MKI67P46013 3256 aaKnown RBP30.71■■■□□ 2.51
VEGFA-208ENST00000417285 GOLIM4O00461 696 aa30.7■■■□□ 2.51
VEGFA-208ENST00000417285 GDF11O95390 407 aa30.7■■■□□ 2.51
VEGFA-208ENST00000417285 FLT3LGP49771 235 aa30.7■■■□□ 2.51
VEGFA-208ENST00000417285 IRF5Q13568 498 aa30.7■■■□□ 2.51
VEGFA-208ENST00000417285 PXYLP1Q8TE99 480 aa30.7■■■□□ 2.51
VEGFA-208ENST00000417285 DNAJC2Q99543 621 aaKnown RBP30.7■■■□□ 2.51
VEGFA-208ENST00000417285 CRNKL1Q9BZJ0 848 aaKnown RBP30.7■■■□□ 2.51
VEGFA-208ENST00000417285 PTPRFP10586 1907 aa30.7■■■□□ 2.51
VEGFA-208ENST00000417285 ZSWIM8A7E2V4 1837 aa30.69■■■□□ 2.5
VEGFA-208ENST00000417285 ATP5JP18859 108 aa30.69■■■□□ 2.5
VEGFA-208ENST00000417285 MTFR1Q15390 333 aa30.69■■■□□ 2.5
VEGFA-208ENST00000417285 MYO5AQ9Y4I1 1855 aaKnown RBP30.69■■■□□ 2.5
VEGFA-208ENST00000417285 ADCY3O60266 1144 aa30.68■■■□□ 2.5
VEGFA-208ENST00000417285 IRX3P78415 501 aaPredicted RBP30.68■■■□□ 2.5
VEGFA-208ENST00000417285 BCL11AQ9H165 835 aa30.68■■■□□ 2.5
VEGFA-208ENST00000417285 GJB1P08034 283 aa30.67■■■□□ 2.5
VEGFA-208ENST00000417285 CCL5P13501 91 aa30.67■■■□□ 2.5
VEGFA-208ENST00000417285 ZNF532Q9HCE3 1301 aa30.67■■■□□ 2.5
VEGFA-208ENST00000417285 SLC34A2O95436 690 aa30.66■■■□□ 2.5
VEGFA-208ENST00000417285 GH2P01242 217 aa30.66■■■□□ 2.5
VEGFA-208ENST00000417285 POLR3DP05423 398 aaPredicted RBP30.66■■■□□ 2.5
VEGFA-208ENST00000417285 CERKLQ49MI3 558 aaPredicted RBP30.66■■■□□ 2.5
VEGFA-208ENST00000417285 USP17L2Q6R6M4 530 aa30.66■■■□□ 2.5
VEGFA-208ENST00000417285 LRRCC1Q9C099 1032 aa30.66■■■□□ 2.5
VEGFA-208ENST00000417285 RNF208Q9H0X6 261 aa30.66■■■□□ 2.5
VEGFA-208ENST00000417285 PAG1Q9NWQ8 432 aa30.66■■■□□ 2.5
VEGFA-208ENST00000417285 CAPN2P17655 700 aa30.65■■■□□ 2.5
VEGFA-208ENST00000417285 GCC1Q96CN9 775 aa30.65■■■□□ 2.5
VEGFA-208ENST00000417285 P2RX7Q99572 595 aaKnown RBP30.65■■■□□ 2.5
VEGFA-208ENST00000417285 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.65■■■□□ 2.51e-12■■■□□ 17.3
VEGFA-208ENST00000417285 CABP5Q9NP86 173 aa30.65■■■□□ 2.5
VEGFA-208ENST00000417285 MORF4L1Q9UBU8 362 aa30.65■■■□□ 2.5
VEGFA-208ENST00000417285 FOCADQ5VW36 1801 aa30.65■■■□□ 2.5
VEGFA-208ENST00000417285 BRCA2P51587 3418 aa30.64■■■□□ 2.5
VEGFA-208ENST00000417285 TCRBV5S4A2TA0A5A2 114 aa30.64■■■□□ 2.5
VEGFA-208ENST00000417285 SHROOM1Q2M3G4 852 aaPredicted RBP30.64■■■□□ 2.5
VEGFA-208ENST00000417285 BOLA2Q9H3K6 86 aa30.64■■■□□ 2.5
VEGFA-208ENST00000417285 TAOK2Q9UL54 1235 aa30.64■■■□□ 2.5
VEGFA-208ENST00000417285 SIPA1L1O43166 1804 aa30.63■■■□□ 2.49
VEGFA-208ENST00000417285 GJA8P48165 433 aa30.63■■■□□ 2.49
VEGFA-208ENST00000417285 PLCD1P51178 756 aa30.63■■■□□ 2.49
VEGFA-208ENST00000417285 ABCB5Q2M3G0 1257 aa30.63■■■□□ 2.49
VEGFA-208ENST00000417285 GTF3C2Q8WUA4 911 aaPredicted RBP30.63■■■□□ 2.49
VEGFA-208ENST00000417285 HAUS7Q99871 368 aa30.63■■■□□ 2.49
VEGFA-208ENST00000417285 ATAD5Q96QE3 1844 aa30.63■■■□□ 2.49
VEGFA-208ENST00000417285 CDK5RAP2Q96SN8 1893 aa30.63■■■□□ 2.49
VEGFA-208ENST00000417285 GPRC5AQ8NFJ5 357 aa30.62■■■□□ 2.49
VEGFA-208ENST00000417285 EMILIN3Q9NT22 766 aa30.62■■■□□ 2.49
VEGFA-208ENST00000417285 MCM9Q9NXL9 1143 aa30.62■■■□□ 2.49
VEGFA-208ENST00000417285 LOC285556D6RIA3 1793 aa30.61■■■□□ 2.49
VEGFA-208ENST00000417285 USP14P54578 494 aa30.61■■■□□ 2.49
VEGFA-208ENST00000417285 HERVK_113P62684 666 aa30.61■■■□□ 2.49
VEGFA-208ENST00000417285 ELNP15502 786 aa30.6■■■□□ 2.49
VEGFA-208ENST00000417285 SHMT1P34896 483 aa30.6■■■□□ 2.49
VEGFA-208ENST00000417285 RAB3GAP1Q15042 981 aa30.6■■■□□ 2.49
VEGFA-208ENST00000417285 EDC3Q96F86 508 aaKnown RBP30.6■■■□□ 2.49
VEGFA-208ENST00000417285 C12orf42Q96LP6 360 aa30.6■■■□□ 2.49
VEGFA-208ENST00000417285 INHAP05111 366 aa30.59■■■□□ 2.49
VEGFA-208ENST00000417285 ADD2P35612 726 aa30.59■■■□□ 2.49
VEGFA-208ENST00000417285 GABPAQ06546 454 aa30.59■■■□□ 2.49
VEGFA-208ENST00000417285 FEZ1Q99689 392 aa30.59■■■□□ 2.49
VEGFA-208ENST00000417285 KIAA1683Q9H0B3 1180 aa30.59■■■□□ 2.49
VEGFA-208ENST00000417285 DCP1AQ9NPI6 582 aaPredicted RBP30.59■■■□□ 2.49
VEGFA-208ENST00000417285 MGAMO43451 1857 aa30.59■■■□□ 2.49
VEGFA-208ENST00000417285 ZSCAN25Q6NSZ9 544 aa30.58■■■□□ 2.49
VEGFA-208ENST00000417285 SHISA4Q96DD7 197 aa30.58■■■□□ 2.49
VEGFA-208ENST00000417285 UNC93B1Q9H1C4 597 aa30.58■■■□□ 2.49
VEGFA-208ENST00000417285 DCTPP1Q9H773 170 aa30.58■■■□□ 2.49
VEGFA-208ENST00000417285 ATP8A2Q9NTI2 1148 aa30.58■■■□□ 2.49
VEGFA-208ENST00000417285 GJD2Q9UKL4 321 aa30.58■■■□□ 2.49
VEGFA-208ENST00000417285 MYH1P12882 1939 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 USP17L15C9J2P7 530 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 USP17L13C9JLJ4 530 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 USP17L11C9JVI0 530 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 USP17L18D6R9N7 530 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 USP17L22D6RA61 530 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 USP17L17D6RBQ6 530 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 USP17L19D6RCP7 530 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 USP17L20D6RJB6 530 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 USP17L24Q0WX57 530 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 UBE3CQ15386 1083 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 LCORLQ8N3X6 602 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 RBPJLQ9UBG7 517 aa30.57■■■□□ 2.48
VEGFA-208ENST00000417285 SGPL1O95470 568 aa30.56■■■□□ 2.48
VEGFA-208ENST00000417285 U2AF1L4Q8WU68 220 aaKnown RBP30.56■■■□□ 2.48
VEGFA-208ENST00000417285 SDR42E1Q8WUS8 393 aa30.56■■■□□ 2.48
VEGFA-208ENST00000417285 ARMT1Q9H993 441 aa30.56■■■□□ 2.48
VEGFA-208ENST00000417285 MAPK4P31152 587 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms