RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 IRF5Q13568 498 aa26.55■■□□□ 1.84
ACTB-203ENST00000417101 RHPN1Q8TCX5 695 aa26.55■■□□□ 1.84
ACTB-203ENST00000417101 UNC93B1Q9H1C4 597 aa26.55■■□□□ 1.84
ACTB-203ENST00000417101 TMOD4Q9NZQ9 345 aa26.55■■□□□ 1.84
ACTB-203ENST00000417101 ZBTB21Q9ULJ3 1066 aa26.55■■□□□ 1.84
ACTB-203ENST00000417101 FOCADQ5VW36 1801 aa26.54■■□□□ 1.84
ACTB-203ENST00000417101 CEP290O15078 2479 aa26.54■■□□□ 1.84
ACTB-203ENST00000417101 APBB1O00213 710 aa26.54■■□□□ 1.84
ACTB-203ENST00000417101 USP5P45974 858 aa26.54■■□□□ 1.84
ACTB-203ENST00000417101 HABP4Q5JVS0 413 aaKnown RBP26.54■■□□□ 1.84
ACTB-203ENST00000417101 CERS3Q8IU89 383 aa26.54■■□□□ 1.84
ACTB-203ENST00000417101 PXYLP1Q8TE99 480 aa26.54■■□□□ 1.84
ACTB-203ENST00000417101 GINM1Q9NU53 330 aa26.54■■□□□ 1.84
ACTB-203ENST00000417101 INHAP05111 366 aa26.53■■□□□ 1.84
ACTB-203ENST00000417101 COG6Q9Y2V7 657 aa26.53■■□□□ 1.84
ACTB-203ENST00000417101 IRX3P78415 501 aaPredicted RBP26.52■■□□□ 1.84
ACTB-203ENST00000417101 U2AF1L4Q8WU68 220 aaKnown RBP26.52■■□□□ 1.84
ACTB-203ENST00000417101 C19orf81C9J6K1 198 aa26.51■■□□□ 1.83
ACTB-203ENST00000417101 USP17L10C9JJH3 530 aa26.51■■□□□ 1.83
ACTB-203ENST00000417101 RPAP2Q8IXW5 612 aaPredicted RBP26.51■■□□□ 1.83
ACTB-203ENST00000417101 DDX19BQ9UMR2 479 aa26.51■■□□□ 1.83
ACTB-203ENST00000417101 HOXA7P31268 230 aaPredicted RBP26.5■■□□□ 1.83
ACTB-203ENST00000417101 TMED8Q6PL24 325 aaPredicted RBP26.5■■□□□ 1.83
ACTB-203ENST00000417101 CLASRPQ8N2M8 674 aaKnown RBP26.5■■□□□ 1.83
ACTB-203ENST00000417101 KIF1BPQ96EK5 621 aa26.5■■□□□ 1.83
ACTB-203ENST00000417101 P2RX7Q99572 595 aaKnown RBP26.5■■□□□ 1.83
ACTB-203ENST00000417101 BCL11AQ9H165 835 aa26.5■■□□□ 1.83
ACTB-203ENST00000417101 ZBTB40Q9NUA8 1239 aa26.5■■□□□ 1.83
ACTB-203ENST00000417101 DOCK3Q8IZD9 2030 aa26.49■■□□□ 1.83
ACTB-203ENST00000417101 H0YGN5 161 aa26.49■■□□□ 1.83
ACTB-203ENST00000417101 HMMRO75330 724 aa26.49■■□□□ 1.83
ACTB-203ENST00000417101 GH2P01242 217 aa26.49■■□□□ 1.83
ACTB-203ENST00000417101 UBE2Q1Q7Z7E8 422 aa26.49■■□□□ 1.83
ACTB-203ENST00000417101 SIRT2Q8IXJ6 389 aa26.49■■□□□ 1.83
ACTB-203ENST00000417101 MORF4L1Q9UBU8 362 aa26.49■■□□□ 1.83
ACTB-203ENST00000417101 SGPL1O95470 568 aa26.48■■□□□ 1.83
ACTB-203ENST00000417101 TTF1Q15361 905 aaPredicted RBP26.48■■□□□ 1.83
ACTB-203ENST00000417101 DPF3Q92784 378 aa26.48■■□□□ 1.83
ACTB-203ENST00000417101 RIOK1Q9BRS2 568 aaKnown RBP26.48■■□□□ 1.83
ACTB-203ENST00000417101 SERPINB13Q9UIV8 391 aa26.48■■□□□ 1.83
ACTB-203ENST00000417101 PEX10O60683 326 aa26.47■■□□□ 1.83
ACTB-203ENST00000417101 IFIT2P09913 472 aaKnown RBP26.47■■□□□ 1.83
ACTB-203ENST00000417101 HERVK_113P62684 666 aa26.47■■□□□ 1.83
ACTB-203ENST00000417101 TATDN1Q6P1N9 297 aa26.47■■□□□ 1.83
ACTB-203ENST00000417101 TTC6Q86TZ1 520 aa26.47■■□□□ 1.83
ACTB-203ENST00000417101 DEFB118Q96PH6 123 aa26.47■■□□□ 1.83
ACTB-203ENST00000417101 EHD4Q9H223 541 aa26.47■■□□□ 1.83
ACTB-203ENST00000417101 EMILIN3Q9NT22 766 aa26.47■■□□□ 1.83
ACTB-203ENST00000417101 GJD2Q9UKL4 321 aa26.47■■□□□ 1.83
ACTB-203ENST00000417101 MYH1P12882 1939 aa26.46■■□□□ 1.83
ACTB-203ENST00000417101 MAGEB6P1A0A0J9YX57 407 aa26.46■■□□□ 1.83
ACTB-203ENST00000417101 FARP2O94887 1054 aaPredicted RBP26.46■■□□□ 1.83
ACTB-203ENST00000417101 PDE6AP16499 860 aa26.46■■□□□ 1.83
ACTB-203ENST00000417101 SLC9C2Q5TAH2 1124 aa26.46■■□□□ 1.83
ACTB-203ENST00000417101 DNAJC2Q99543 621 aaKnown RBP26.46■■□□□ 1.83
ACTB-203ENST00000417101 PCDH10Q9P2E7 1040 aa26.46■■□□□ 1.83
ACTB-203ENST00000417101 COLQQ9Y215 455 aaPredicted RBP26.46■■□□□ 1.83
ACTB-203ENST00000417101 GOLIM4O00461 696 aa26.45■■□□□ 1.82
ACTB-203ENST00000417101 TFRCP02786 760 aaKnown RBP26.45■■□□□ 1.82
ACTB-203ENST00000417101 USP17L2Q6R6M4 530 aa26.45■■□□□ 1.82
ACTB-203ENST00000417101 HTATIP2Q9BUP3 242 aa26.45■■□□□ 1.82
ACTB-203ENST00000417101 TXNRD2Q9NNW7 524 aa26.45■■□□□ 1.82
ACTB-203ENST00000417101 PAK6Q9NQU5 681 aaPredicted RBP26.45■■□□□ 1.82
ACTB-203ENST00000417101 RCAN3Q9UKA8 241 aa26.45■■□□□ 1.82
ACTB-203ENST00000417101 PLCD1P51178 756 aa26.44■■□□□ 1.82
ACTB-203ENST00000417101 ZYXQ15942 572 aaKnown RBP26.44■■□□□ 1.82
ACTB-203ENST00000417101 CERKLQ49MI3 558 aaPredicted RBP26.44■■□□□ 1.82
ACTB-203ENST00000417101 GPRC5AQ8NFJ5 357 aa26.44■■□□□ 1.82
ACTB-203ENST00000417101 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.44■■□□□ 1.82
ACTB-203ENST00000417101 RAB11FIP3O75154 756 aa26.43■■□□□ 1.82
ACTB-203ENST00000417101 HMGCRP04035 888 aa26.43■■□□□ 1.82
ACTB-203ENST00000417101 POLR3DP05423 398 aaPredicted RBP26.43■■□□□ 1.82
ACTB-203ENST00000417101 RAB3GAP1Q15042 981 aa26.43■■□□□ 1.82
ACTB-203ENST00000417101 FEZ1Q99689 392 aa26.43■■□□□ 1.82
ACTB-203ENST00000417101 CRNKL1Q9BZJ0 848 aaKnown RBP26.43■■□□□ 1.82
ACTB-203ENST00000417101 RBPJLQ9UBG7 517 aa26.43■■□□□ 1.82
ACTB-203ENST00000417101 ZNF532Q9HCE3 1301 aa26.42■■□□□ 1.82
ACTB-203ENST00000417101 ABCB5Q2M3G0 1257 aa26.42■■□□□ 1.82
ACTB-203ENST00000417101 EDC3Q96F86 508 aaKnown RBP26.42■■□□□ 1.82
ACTB-203ENST00000417101 PAGR1Q9BTK6 254 aa26.42■■□□□ 1.82
ACTB-203ENST00000417101 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.42■■□□□ 1.826e-14■■■□□ 15.1
ACTB-203ENST00000417101 SHMT1P34896 483 aa26.41■■□□□ 1.82
ACTB-203ENST00000417101 CHMP4BQ9H444 224 aaKnown RBP26.41■■□□□ 1.82
ACTB-203ENST00000417101 TCRBV5S4A2TA0A5A2 114 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 CYP2B6P20813 491 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 ERVK-9P63128 1117 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 ERVK-24P63145 666 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 TRIM32Q13049 653 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 Q3C1V9 767 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 ACER1Q8TDN7 264 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 GTF3C2Q8WUA4 911 aaPredicted RBP26.4■■□□□ 1.82
ACTB-203ENST00000417101 C12orf42Q96LP6 360 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 CRISPLD2Q9H0B8 497 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 CABP5Q9NP86 173 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 MCM9Q9NXL9 1143 aa26.4■■□□□ 1.82
ACTB-203ENST00000417101 CAPN2P17655 700 aa26.39■■□□□ 1.82
ACTB-203ENST00000417101 MAPK4P31152 587 aa26.39■■□□□ 1.82
ACTB-203ENST00000417101 EVX2Q03828 476 aa26.39■■□□□ 1.82
ACTB-203ENST00000417101 POTEEQ6S8J3 1075 aa26.39■■□□□ 1.82
ACTB-203ENST00000417101 CCAR1Q8IX12 1150 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms