RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 TNKSO95271 1327 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 TCP10L2B9ZVM9 353 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 PFKFB2O60825 505 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 LARGE1O95461 756 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 LMOD1P29536 600 aaPredicted RBP11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 LIFRP42702 1097 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 CDK8P49336 464 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 ZNF280AP59817 542 aaPredicted RBP11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 IFIT1BQ5T764 474 aaKnown RBP11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 RBM26Q5T8P6 1007 aaKnown RBP11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 CPLX2Q6PUV4 134 aaKnown RBP11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 C16orf86Q6ZW13 317 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 GPC2Q8N158 579 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 GTF3C6Q969F1 213 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 ZSCAN10Q96SZ4 725 aaPredicted RBP11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 PI4KBQ9UBF8 816 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 ZNF70Q9UC06 446 aaPredicted RBP11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 CNOT7Q9UIV1 285 aaKnown RBP11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 TACC3Q9Y6A5 838 aa11.92□□□□□ -0.5
DEPDC4-203ENST00000416321 SMIM22K7EJ46 135 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 CPLX1O14810 134 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 ZBTB43O43298 467 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 NUCB2P80303 420 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 TFAP4Q01664 338 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 TNFAIP1Q13829 316 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 FAM47AQ5JRC9 791 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 C9orf131Q5VYM1 1079 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 SLC44A5Q8NCS7 719 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 IGDCC4Q8TDY8 1250 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 EHD4Q9H223 541 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 LY9Q9HBG7 655 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 KIF3AQ9Y496 699 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 SBF1O95248 1867 aa11.91□□□□□ -0.5
DEPDC4-203ENST00000416321 COL2A1P02458 1487 aaPredicted RBP11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 MYH8P13535 1937 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 GOLGA8AA7E2F4 631 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 WNT10BO00744 389 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 RASA1P20936 1047 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 PDIA3P30101 505 aaKnown RBP11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 METAP2P50579 478 aaKnown RBP eCLIP11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 EVCP57679 992 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 KIF4BQ2VIQ3 1234 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 FKBP1CQ5VVH2 108 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 CATIPQ7Z7H3 387 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 SGMS1Q86VZ5 419 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 MICU3Q86XE3 530 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 FOXP4Q8IVH2 680 aaPredicted RBP11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 FAM184AQ8NB25 1140 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 FAM151AQ8WW52 585 aa11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 LLPHQ9BRT6 129 aaKnown RBP11.9□□□□□ -0.5
DEPDC4-203ENST00000416321 CDKL5O76039 1030 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 CALM1P0DP23 149 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 CALM2P0DP24 149 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 CALM3P0DP25 149 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 GJB2P29033 226 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 HMGN5P82970 282 aaKnown RBP11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 SCRN1Q12765 414 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 NBPF9Q3BBW0 867 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 TBC1D10BQ4KMP7 808 aaPredicted RBP11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 APOA5Q6Q788 366 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 FAM83AQ86UY5 434 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 ENAHQ8N8S7 591 aaPredicted RBP11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 NUP133Q8WUM0 1156 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 CSRNP1Q96S65 589 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 KAT14Q9H8E8 782 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 GPRC5DQ9NZD1 345 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 BRPF3Q9ULD4 1205 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 ATRNL1Q5VV63 1379 aa11.89□□□□□ -0.51
DEPDC4-203ENST00000416321 CCDC196A0A1B0GTZ2 297 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 SHTN1A0MZ66 631 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 DDTLA6NHG4 134 aaPredicted RBP11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 MPHOSPH10O00566 681 aaKnown RBP11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 DDAH1O94760 285 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 PDIA4P13667 645 aaKnown RBP11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 PDCP20941 246 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 RCAN1P53805 252 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 RTN1Q16799 776 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 SAMD7Q7Z3H4 446 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 DGKHQ86XP1 1220 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 RAB11FIP4Q86YS3 637 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 ZFPM1Q8IX07 1006 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 ZNF654Q8IZM8 581 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 NEDD1Q8NHV4 660 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 NKX2-3Q8TAU0 364 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 ZBED3Q96IU2 234 aaPredicted RBP11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 CCDC17Q96LX7 622 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 TCP11L1Q9NUJ3 509 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 HERC5Q9UII4 1024 aaKnown RBP11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 STX8Q9UNK0 236 aa11.88□□□□□ -0.51
DEPDC4-203ENST00000416321 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
DEPDC4-203ENST00000416321 GABPAQ06546 454 aa11.87□□□□□ -0.51
DEPDC4-203ENST00000416321 PPP2R5BQ15173 497 aa11.87□□□□□ -0.51
DEPDC4-203ENST00000416321 SEC23AQ15436 765 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms