RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 MAPKAPK5Q8IW41 473 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 MAFAQ8NHW3 353 aaPredicted RBP11.59□□□□□ -0.55
LINC01238-201ENST00000416204 SOCS4Q8WXH5 440 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 MYLIPQ8WY64 445 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 USP6NLQ92738 828 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 NEUROD6Q96NK8 337 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 AS3MTQ9HBK9 375 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 HMG20BQ9P0W2 317 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 SAP30BPQ9UHR5 308 aaKnown RBP11.59□□□□□ -0.55
LINC01238-201ENST00000416204 ATP11BQ9Y2G3 1177 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 MUC3AQ02505 3323 aa11.58□□□□□ -0.56
LINC01238-201ENST00000416204 A0A1B0GUL7 405 aa11.58□□□□□ -0.56
LINC01238-201ENST00000416204 XRCC5P13010 732 aaKnown RBP11.58□□□□□ -0.56
LINC01238-201ENST00000416204 RGS2P41220 211 aa11.58□□□□□ -0.56
LINC01238-201ENST00000416204 BACE1P56817 501 aa11.58□□□□□ -0.56
LINC01238-201ENST00000416204 SHHQ15465 462 aa11.58□□□□□ -0.56
LINC01238-201ENST00000416204 MORN1Q5T089 497 aa11.58□□□□□ -0.56
LINC01238-201ENST00000416204 PLEKHH3Q7Z736 793 aa11.58□□□□□ -0.56
LINC01238-201ENST00000416204 NSUN4Q96CB9 384 aaKnown RBP11.58□□□□□ -0.56
LINC01238-201ENST00000416204 APBA2Q99767 749 aa11.58□□□□□ -0.56
LINC01238-201ENST00000416204 DNAJC18Q9H819 358 aa11.58□□□□□ -0.56
LINC01238-201ENST00000416204 PRDM5Q9NQX1 630 aaPredicted RBP11.58□□□□□ -0.56
LINC01238-201ENST00000416204 ATAD5Q96QE3 1844 aa11.58□□□□□ -0.56
LINC01238-201ENST00000416204 MAPK4P31152 587 aa11.57□□□□□ -0.56
LINC01238-201ENST00000416204 RTP1P59025 263 aa11.57□□□□□ -0.56
LINC01238-201ENST00000416204 GJC2Q5T442 439 aaPredicted RBP11.57□□□□□ -0.56
LINC01238-201ENST00000416204 FAM109BQ6ICB4 259 aaPredicted RBP11.57□□□□□ -0.56
LINC01238-201ENST00000416204 SNRKQ9NRH2 765 aa11.57□□□□□ -0.56
LINC01238-201ENST00000416204 EMILIN3Q9NT22 766 aa11.57□□□□□ -0.56
LINC01238-201ENST00000416204 AATFQ9NY61 560 aaKnown RBP eCLIP11.57□□□□□ -0.56
LINC01238-201ENST00000416204 RAPGEFL1Q9UHV5 662 aa11.57□□□□□ -0.56
LINC01238-201ENST00000416204 CNMDO75829 334 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 HOXA7P31268 230 aaPredicted RBP11.56□□□□□ -0.56
LINC01238-201ENST00000416204 CYP2C19P33261 490 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 GSTO1P78417 241 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 GORABQ5T7V8 394 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 CRACR2BQ8N4Y2 399 aaPredicted RBP11.56□□□□□ -0.56
LINC01238-201ENST00000416204 SPATA5Q8NB90 893 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 TRPV1Q8NER1 839 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 TGFBRAP1Q8WUH2 860 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 MEIS3Q99687 375 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 WDR18Q9BV38 432 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 TRIM34Q9BYJ4 488 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 TTYH1Q9H313 450 aaPredicted RBP11.56□□□□□ -0.56
LINC01238-201ENST00000416204 SEMA6BQ9H3T3 888 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 PRDM6Q9NQX0 595 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 SMC4Q9NTJ3 1288 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 PRKAG2Q9UGJ0 569 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 PALD1Q9ULE6 856 aa11.56□□□□□ -0.56
LINC01238-201ENST00000416204 COL2A1P02458 1487 aaPredicted RBP11.56□□□□□ -0.56
LINC01238-201ENST00000416204 USP17L10C9JJH3 530 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 LDHCP07864 332 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 MAP2K5Q13163 448 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
LINC01238-201ENST00000416204 MFSD14CQ5VZR4 134 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 ADGRA1Q86SQ6 560 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 TRMT44Q8IYL2 757 aaKnown RBP11.55□□□□□ -0.56
LINC01238-201ENST00000416204 BADQ92934 168 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 EDC3Q96F86 508 aaKnown RBP11.55□□□□□ -0.56
LINC01238-201ENST00000416204 TBC1D2Q9BYX2 928 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 COPRSQ9NQ92 184 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 LRP2BPQ9P2M1 347 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 PI4KBQ9UBF8 816 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 DDX20Q9UHI6 824 aaKnown RBP11.55□□□□□ -0.56
LINC01238-201ENST00000416204 HERC5Q9UII4 1024 aaKnown RBP11.55□□□□□ -0.56
LINC01238-201ENST00000416204 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 ZBTB21Q9ULJ3 1066 aa11.55□□□□□ -0.56
LINC01238-201ENST00000416204 PDS5AQ29RF7 1337 aaKnown RBP11.55□□□□□ -0.56
LINC01238-201ENST00000416204 SIPA1L1O43166 1804 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 SRGAP3O43295 1099 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 NPM3O75607 178 aaKnown RBP11.54□□□□□ -0.56
LINC01238-201ENST00000416204 GH2P01242 217 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 ASNSP08243 561 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 FOSL2P15408 326 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 MCAMP43121 646 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 ATP2B2Q01814 1243 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 TRIM60Q495X7 471 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 SH3RF1Q7Z6J0 888 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 NPLOC4Q8TAT6 608 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 FERMT2Q96AC1 680 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 FEZ1Q99689 392 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
LINC01238-201ENST00000416204 FLT1P17948 1338 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 ZNF521Q96K83 1311 aa11.54□□□□□ -0.56
LINC01238-201ENST00000416204 C19orf81C9J6K1 198 aa11.53□□□□□ -0.56
LINC01238-201ENST00000416204 NAA16Q6N069 864 aaPredicted RBP11.53□□□□□ -0.56
LINC01238-201ENST00000416204 USP38Q8NB14 1042 aa11.53□□□□□ -0.56
LINC01238-201ENST00000416204 NOL10Q9BSC4 688 aaKnown RBP11.53□□□□□ -0.56
LINC01238-201ENST00000416204 BTBD7Q9P203 1132 aa11.53□□□□□ -0.56
LINC01238-201ENST00000416204 MAST2Q6P0Q8 1798 aa11.53□□□□□ -0.56
LINC01238-201ENST00000416204 TTC28Q96AY4 2481 aa11.52□□□□□ -0.56
LINC01238-201ENST00000416204 FRMPD3Q5JV73 1810 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 TRIM43BA6NCK2 446 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 DNM1LO00429 736 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 ANP32CO43423 234 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 PTPREP23469 700 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 DYNLL1P63167 89 aaKnown RBP11.52□□□□□ -0.57
LINC01238-201ENST00000416204 RAB3GAP1Q15042 981 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 PRAMEF19Q5SWL8 479 aa11.52□□□□□ -0.57
LINC01238-201ENST00000416204 USP17L2Q6R6M4 530 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms