RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 ZNF202O95125 648 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 BAG1Q99933 345 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-203ENST00000416123 AZI2Q9H6S1 392 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 CSGALNACT2Q8N6G5 542 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-203ENST00000416123 BEGAINQ9BUH8 593 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 CSADQ9Y600 493 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 GOLGA1Q92805 767 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 NAP1L4Q99733 375 aaKnown RBP11.88□□□□□ -0.51
COL12A1-203ENST00000416123 TXNDC16Q9P2K2 825 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 ADORA1P30542 326 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 MYL5Q02045 173 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 FAM160A1Q05DH4 1040 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 CHRNDQ07001 517 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 IGSF22Q8N9C0 903 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 UBLCP1Q8WVY7 318 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-203ENST00000416123 GADD45BO75293 160 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-203ENST00000416123 TNFAIP3P21580 790 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 CNGA1P29973 690 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-203ENST00000416123 SPECC1LQ69YQ0 1117 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 HERC4Q5GLZ8 1057 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-203ENST00000416123 TLDC2A0PJX2 215 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 SMCO2A6NFE2 343 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 ASIC2Q16515 512 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 TSGA10Q9BZW7 698 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 CDC42BPAQ5VT25 1732 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 BRDTQ58F21 947 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-203ENST00000416123 LLPHQ9BRT6 129 aaKnown RBP11.87□□□□□ -0.51
COL12A1-203ENST00000416123 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
COL12A1-203ENST00000416123 LOC102724428A0A0B4J2F2 783 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 A0A0D9SFI3 127 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 PRAMEF22A3QJZ6 481 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 DAPK3O43293 454 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 SIK1P57059 783 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 FAM47CQ5HY64 1035 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 KCNK9Q9NPC2 374 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 USTQ9Y2C2 406 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 SPOPO43791 374 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 BMS1Q14692 1282 aaKnown RBP11.87□□□□□ -0.51
COL12A1-203ENST00000416123 PPP1R21Q6ZMI0 780 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 HECW2Q9P2P5 1572 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 CLRN2A0PK11 232 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 PROSER3Q2NL68 480 aa11.87□□□□□ -0.51
COL12A1-203ENST00000416123 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-203ENST00000416123 TECP42680 631 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 PPP2R5DQ14738 602 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 PPANQ9NQ55 473 aaKnown RBP11.86□□□□□ -0.51
COL12A1-203ENST00000416123 ARHGEF5Q12774 1597 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 MYOM2P54296 1465 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 LRMPQ12912 555 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 CABP7Q86V35 215 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 ANO3Q9BYT9 981 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 PTH1RQ03431 593 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 PAK1Q13153 545 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 PNOCQ13519 176 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 ALAS1P13196 640 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 SEL1L2Q5TEA6 688 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 KDM5CP41229 1560 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 NONOQ15233 471 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL12A1-203ENST00000416123 CERKLQ49MI3 558 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-203ENST00000416123 CDAN1Q8IWY9 1227 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 LRWD1Q9UFC0 647 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 NDC80O14777 642 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 ATP2A1O14983 1001 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 FAM102BQ5T8I3 360 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 GPKOWQ92917 476 aaPredicted RBP eCLIP11.86□□□□□ -0.51
COL12A1-203ENST00000416123 METP08581 1390 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 E7EVH7 732 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 TBC1D22AQ8WUA7 517 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 PSMB7Q99436 277 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 NACA2Q9H009 215 aa11.86□□□□□ -0.51
COL12A1-203ENST00000416123 BTDP43251 543 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 POSTNQ15063 836 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 ME3Q16798 604 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 KDM5DQ9BY66 1539 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 IFNL3Q8IZI9 196 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 NELFBQ8WX92 580 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 REXO1Q8N1G1 1221 aaKnown RBP11.85□□□□□ -0.51
COL12A1-203ENST00000416123 ATRIPQ8WXE1 791 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 DDX12PQ92771 950 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 ZSCAN10Q96SZ4 725 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-203ENST00000416123 USP44Q9H0E7 712 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 TMEM94Q12767 1356 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 PPEF1O14829 653 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-203ENST00000416123 SLC8A3P57103 927 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 KRT40Q6A162 431 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 FAM169AQ9Y6X4 670 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 CUTAO60888 179 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 CCDC117Q8IWD4 279 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-203ENST00000416123 TRMT44Q8IYL2 757 aaKnown RBP11.85□□□□□ -0.51
COL12A1-203ENST00000416123 RNF169Q8NCN4 708 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 GIMAP7Q8NHV1 300 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 GLG1Q92896 1179 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL12A1-203ENST00000416123 CFAP58Q5T655 872 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 SPICE1Q8N0Z3 855 aa11.85□□□□□ -0.51
COL12A1-203ENST00000416123 PUS3Q9BZE2 481 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms