RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 TMEM67Q5HYA8 995 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 SYNE3Q6ZMZ3 975 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 CYB5R4Q7L1T6 521 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 SH3BP5LQ7L8J4 393 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 CHST3Q7LGC8 479 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
RBM39-208ENST00000416108 LRRC2Q9BYS8 371 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 RRAGCQ9HB90 399 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 CABP5Q9NP86 173 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 INCENPQ9NQS7 918 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 ZSWIM5Q9P217 1185 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 OTOFQ9HC10 1997 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 TNKSO95271 1327 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 CCDC69A6NI79 296 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 SMIM22K7EJ46 135 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 RASA1P20936 1047 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 EXOSC10Q01780 885 aaKnown RBP9.87□□□□□ -0.83
RBM39-208ENST00000416108 GABPAQ06546 454 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 CERKLQ49MI3 558 aaPredicted RBP9.87□□□□□ -0.83
RBM39-208ENST00000416108 FAM47AQ5JRC9 791 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 TMTC2Q8N394 836 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 ZNF526Q8TF50 670 aaPredicted RBP9.87□□□□□ -0.83
RBM39-208ENST00000416108 BRF1Q92994 677 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 CHMP4CQ96CF2 233 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 TTC14Q96N46 770 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 ZSCAN10Q96SZ4 725 aaPredicted RBP9.87□□□□□ -0.83
RBM39-208ENST00000416108 ZKSCAN3Q9BRR0 538 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 ALDH8A1Q9H2A2 487 aaPredicted RBP9.87□□□□□ -0.83
RBM39-208ENST00000416108 ANGEL1Q9UNK9 670 aaKnown RBP9.87□□□□□ -0.83
RBM39-208ENST00000416108 SCAF8Q9UPN6 1271 aaKnown RBP9.87□□□□□ -0.83
RBM39-208ENST00000416108 LIMCH1Q9UPQ0 1083 aa9.87□□□□□ -0.83
RBM39-208ENST00000416108 FAM196BA6NMK8 535 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 SH2B2O14492 632 aaPredicted RBP9.86□□□□□ -0.83
RBM39-208ENST00000416108 TBC1D12O60347 775 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 SHMT1P34896 483 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 ANTXR2P58335 489 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 ABCB5Q2M3G0 1257 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 IFIT1BQ5T764 474 aaKnown RBP9.86□□□□□ -0.83
RBM39-208ENST00000416108 CDC37L1Q7L3B6 337 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 KRT26Q7Z3Y9 468 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 NEDD1Q8NHV4 660 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 ZNF341Q9BYN7 854 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 TBC1D2Q9BYX2 928 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 SH2B1Q9NRF2 756 aaPredicted RBP9.86□□□□□ -0.83
RBM39-208ENST00000416108 TACC3Q9Y6A5 838 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 PLIN4Q96Q06 1357 aa9.86□□□□□ -0.83
RBM39-208ENST00000416108 KLF18A0A0U1RQI7 1052 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 POTECB2RU33 542 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 ADM5C9JUS6 153 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 AKR1B1P15121 316 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 LIFRP42702 1097 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 APOBRQ0VD83 1088 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 TOB2Q14106 344 aaPredicted RBP9.85□□□□□ -0.83
RBM39-208ENST00000416108 NBPF12Q5TAG4 269 aaPredicted RBP9.85□□□□□ -0.83
RBM39-208ENST00000416108 TATDN1Q6P1N9 297 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 TMEM179Q6ZVK1 233 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 MIGA2Q7L4E1 593 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 USP48Q86UV5 1035 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 METTL16Q86W50 562 aaKnown RBP9.85□□□□□ -0.83
RBM39-208ENST00000416108 LDHDQ86WU2 507 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 FBXL16Q8N461 479 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 TEPSINQ96N21 525 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 IPO9Q96P70 1041 aaKnown RBP9.85□□□□□ -0.83
RBM39-208ENST00000416108 SLKQ9H2G2 1235 aaPredicted RBP9.85□□□□□ -0.83
RBM39-208ENST00000416108 KAT14Q9H8E8 782 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 TCP11L1Q9NUJ3 509 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 STX8Q9UNK0 236 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 SLC12A7Q9Y666 1083 aa9.85□□□□□ -0.83
RBM39-208ENST00000416108 GOLGA8BA8MQT2 603 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 ZBTB43O43298 467 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 GDF11O95390 407 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 CD2BP2O95400 341 aaKnown RBP9.84□□□□□ -0.83
RBM39-208ENST00000416108 CALM1P0DP23 149 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 CALM2P0DP24 149 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 CALM3P0DP25 149 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 ATP2B2Q01814 1243 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 TTLL12Q14166 644 aaPredicted RBP9.84□□□□□ -0.83
RBM39-208ENST00000416108 CPLX2Q6PUV4 134 aaKnown RBP9.84□□□□□ -0.83
RBM39-208ENST00000416108 CATIPQ7Z7H3 387 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 DGKHQ86XP1 1220 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 CDAN1Q8IWY9 1227 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 CDCA5Q96FF9 252 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 LARP6Q9BRS8 491 aaKnown RBP9.84□□□□□ -0.83
RBM39-208ENST00000416108 AGXT2Q9BYV1 514 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 DNAJC18Q9H819 358 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 LY9Q9HBG7 655 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 NMRK2Q9NPI5 230 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 GINM1Q9NU53 330 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 PGAP2Q9UHJ9 254 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 PHIPQ8WWQ0 1821 aa9.84□□□□□ -0.83
RBM39-208ENST00000416108 PAPPA2Q9BXP8 1791 aa9.83□□□□□ -0.84
RBM39-208ENST00000416108 DHX16O60231 1041 aaKnown RBP9.83□□□□□ -0.84
RBM39-208ENST00000416108 PPP1R12BO60237 982 aaPredicted RBP9.83□□□□□ -0.84
RBM39-208ENST00000416108 TTLL1O95922 423 aa9.83□□□□□ -0.84
RBM39-208ENST00000416108 ASNSP08243 561 aa9.83□□□□□ -0.84
RBM39-208ENST00000416108 TOP1P11387 765 aaKnown RBP9.83□□□□□ -0.84
RBM39-208ENST00000416108 METAP2P50579 478 aaKnown RBP eCLIP9.83□□□□□ -0.84
RBM39-208ENST00000416108 ICA1Q05084 483 aa9.83□□□□□ -0.84
RBM39-208ENST00000416108 STK3Q13188 491 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms